RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 MEA1Q16626 185 aa6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ELOA3BQ3SY89 546 aa6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ALKBH5Q6P6C2 394 aaKnown RBP6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 LRSAM1Q6UWE0 723 aa6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 PRR18Q8N4B5 295 aa6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 PPM1NQ8N819 430 aa6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 GBP7Q8N8V2 638 aaPredicted RBP6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 IQUBQ8NA54 791 aa6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 RCBTB1Q8NDN9 531 aa6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ELOA3Q8NG57 546 aa6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ADAMTS18Q8TE60 1221 aa6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 EDEM3Q9BZQ6 932 aa6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 NCOR1P1Q9H4R4 102 aa6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 CHST7Q9NS84 486 aa6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 NSMCE4AQ9NXX6 385 aa6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 SPATA7Q9P0W8 599 aa6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 CLEC1BQ9P126 229 aa6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 COG5Q9UP83 839 aa6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 JAG2Q9Y219 1238 aa6.35□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 BTBD11A6QL63 1104 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 HNRNPCL2B2RXH8 293 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 MCF2LO15068 1137 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 SIGLEC6O43699 453 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 HNRNPCL1O60812 293 aaKnown RBP6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ADAM11O75078 769 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 ALDH2P05091 517 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 TOP1P11387 765 aaKnown RBP6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 TRIM21P19474 475 aaKnown RBP6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 EPS15P42566 896 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 CTCFP49711 727 aaPredicted RBP6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 GPS2Q13227 327 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 FSCN1Q16658 493 aaKnown RBP6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 FAM205BPQ63HN1 556 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 PGBD2Q6P3X8 592 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 SHQ1Q6PI26 577 aaKnown RBP6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 NLRP10Q86W26 655 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 RBM12BQ8IXT5 1001 aaKnown RBP6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 SPERTQ8NA61 448 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 GALNT11Q8NCW6 608 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 FAM76AQ8TAV0 307 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 UCMAQ8WVF2 138 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 CENPIQ92674 756 aaPredicted RBP6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 LTV1Q96GA3 475 aaPredicted RBP6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 MIPEPQ99797 713 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 PI4K2AQ9BTU6 479 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 KIAA1683Q9H0B3 1180 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 TUBD1Q9UJT1 453 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 CORO2BQ9UQ03 480 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 SNX13Q9Y5W8 968 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 REREQ9P2R6 1566 aa6.34□□□□□ -1.39
ALMS1-IT1-201ENST00000441587 KRBA1A5PL33 1030 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 B4E171 279 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TM4SF5O14894 197 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SLC7A4O43246 635 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 FOXD2O60548 495 aaPredicted RBP6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 GSNP06396 782 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ZBTB48P10074 688 aaPredicted RBP6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 KRT15P19012 456 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CD40P25942 277 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CD68P34810 354 aaPredicted RBP6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 MTHFSP49914 203 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CASP5P51878 434 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 KLHL30Q0D2K2 578 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 IFFO2Q5TF58 517 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TTC19Q6DKK2 380 aaPredicted RBP6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 LIN54Q6MZP7 749 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SLC30A6Q6NXT4 461 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TMC3Q7Z5M5 1100 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TMEM110Q86TL2 294 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 OSTM1Q86WC4 334 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 KSR1Q8IVT5 923 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ZZZ3Q8IYH5 903 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 COLGALT2Q8IYK4 626 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PHKBQ93100 1093 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 COA7Q96BR5 231 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CHAMP1Q96JM3 812 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 CEP295NLQ96MC4 621 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 MDFIQ99750 246 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 LRFN3Q9BTN0 628 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 YIPF2Q9BWQ6 316 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 QRSL1Q9H0R6 528 aaKnown RBP6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SIL1Q9H173 461 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 XAB2Q9HCS7 855 aaKnown RBP6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SEPT11Q9NVA2 429 aaKnown RBP6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 AGLP35573 1532 aa6.34□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 SHPRHQ149N8 1683 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 LRRC72A6NJI9 287 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 LACTBL1A8MY62 500 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 NCK2O43639 380 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 STX6O43752 255 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ADAMTS4O75173 837 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 USP1O94782 785 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 EPN2O95208 641 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PRAMEF1O95521 474 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TBX18O95935 607 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 PDHA1P08559 390 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ALAS1P13196 640 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 ATP5F1P24539 256 aaPredicted RBP6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 TECP42680 631 aa6.33□□□□□ -1.4
ALMS1-IT1-201ENST00000441587 AGFG1P52594 562 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms