RNA–Protein interactions for RNA: ENST00000440760.5

SNX17-203, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,955 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-203ENST00000440760 SOX4Q06945 474 aaPredicted RBP20.43■□□□□ 0.86
SNX17-203ENST00000440760 BEST2Q8NFU1 509 aa20.43■□□□□ 0.86
SNX17-203ENST00000440760 TAF4BQ92750 862 aa20.43■□□□□ 0.86
SNX17-203ENST00000440760 CHST12Q9NRB3 414 aa20.43■□□□□ 0.86
SNX17-203ENST00000440760 PTGESO14684 152 aa20.42■□□□□ 0.86
SNX17-203ENST00000440760 RIOK3O14730 519 aaKnown RBP20.42■□□□□ 0.86
SNX17-203ENST00000440760 CFHP08603 1231 aa20.42■□□□□ 0.86
SNX17-203ENST00000440760 H2AFZP0C0S5 128 aa20.42■□□□□ 0.86
SNX17-203ENST00000440760 GNA15P30679 374 aa20.42■□□□□ 0.86
SNX17-203ENST00000440760 CDK7P50613 346 aa20.42■□□□□ 0.86
SNX17-203ENST00000440760 AFF1P51825 1210 aaKnown RBP20.42■□□□□ 0.86
SNX17-203ENST00000440760 ZNF132P52740 706 aa20.42■□□□□ 0.86
SNX17-203ENST00000440760 ATN1P54259 1190 aaPredicted RBP20.42■□□□□ 0.86
SNX17-203ENST00000440760 GALCP54803 685 aa20.42■□□□□ 0.86
SNX17-203ENST00000440760 RBP5P82980 135 aa20.42■□□□□ 0.86
SNX17-203ENST00000440760 ORC1Q13415 861 aa20.42■□□□□ 0.86
SNX17-203ENST00000440760 H2AFVQ71UI9 128 aa20.42■□□□□ 0.86
SNX17-203ENST00000440760 FAM126BQ8IXS8 530 aa20.42■□□□□ 0.86
SNX17-203ENST00000440760 RNF169Q8NCN4 708 aa20.42■□□□□ 0.86
SNX17-203ENST00000440760 BCO2Q9BYV7 579 aa20.42■□□□□ 0.86
SNX17-203ENST00000440760 MYO1AQ9UBC5 1043 aa20.42■□□□□ 0.86
SNX17-203ENST00000440760 HMGXB4Q9UGU5 601 aa20.42■□□□□ 0.86
SNX17-203ENST00000440760 CNTN6Q9UQ52 1028 aa20.42■□□□□ 0.86
SNX17-203ENST00000440760 XKR4Q5GH76 650 aa20.41■□□□□ 0.86
SNX17-203ENST00000440760 C10orf76Q5T2E6 689 aa20.41■□□□□ 0.86
SNX17-203ENST00000440760 PUF60Q9UHX1 559 aaKnown RBP20.41■□□□□ 0.86
SNX17-203ENST00000440760 UBQLN1Q9UMX0 589 aaKnown RBP20.41■□□□□ 0.86
SNX17-203ENST00000440760 ENC1O14682 589 aa20.41■□□□□ 0.86
SNX17-203ENST00000440760 PQBP1O60828 265 aaKnown RBP20.41■□□□□ 0.86
SNX17-203ENST00000440760 CAND2O75155 1236 aa20.41■□□□□ 0.86
SNX17-203ENST00000440760 HSPA8P11142 646 aaKnown RBP20.41■□□□□ 0.86
SNX17-203ENST00000440760 ITGA4P13612 1032 aa20.41■□□□□ 0.86
SNX17-203ENST00000440760 ATICP31939 592 aa20.41■□□□□ 0.86
SNX17-203ENST00000440760 NAP1L1P55209 391 aaKnown RBP20.41■□□□□ 0.86
SNX17-203ENST00000440760 DSC3Q14574 896 aa20.41■□□□□ 0.86
SNX17-203ENST00000440760 PASD1Q8IV76 773 aa20.41■□□□□ 0.86
SNX17-203ENST00000440760 TXLNBQ8N3L3 684 aa20.41■□□□□ 0.86
SNX17-203ENST00000440760 ADAM2Q99965 735 aa20.41■□□□□ 0.86
SNX17-203ENST00000440760 VRTNQ9H8Y1 702 aa20.41■□□□□ 0.86
SNX17-203ENST00000440760 CACNG4Q9UBN1 327 aa20.41■□□□□ 0.86
SNX17-203ENST00000440760 MKI67P46013 3256 aaKnown RBP20.4■□□□□ 0.86
SNX17-203ENST00000440760 THAP12O43422 761 aa20.4■□□□□ 0.86
SNX17-203ENST00000440760 URI1O94763 535 aaPredicted RBP20.4■□□□□ 0.86
SNX17-203ENST00000440760 KCNE1P15382 129 aa20.4■□□□□ 0.86
SNX17-203ENST00000440760 C9orf57Q5W0N0 161 aa20.4■□□□□ 0.86
SNX17-203ENST00000440760 ARHGEF26Q96DR7 871 aa20.4■□□□□ 0.86
SNX17-203ENST00000440760 GAD1Q99259 594 aa20.4■□□□□ 0.86
SNX17-203ENST00000440760 THAP2Q9H0W7 228 aa20.4■□□□□ 0.86
SNX17-203ENST00000440760 ATF7P17544 494 aaPredicted RBP20.39■□□□□ 0.86
SNX17-203ENST00000440760 BRD2P25440 801 aaKnown RBP20.39■□□□□ 0.86
SNX17-203ENST00000440760 MNX1P50219 401 aaPredicted RBP20.39■□□□□ 0.86
SNX17-203ENST00000440760 AGMOQ6ZNB7 445 aa20.39■□□□□ 0.86
SNX17-203ENST00000440760 CTU1Q7Z7A3 348 aaKnown RBP20.39■□□□□ 0.86
SNX17-203ENST00000440760 ZNF333Q96JL9 665 aa20.39■□□□□ 0.86
SNX17-203ENST00000440760 TWNKQ96RR1 684 aa20.39■□□□□ 0.86
SNX17-203ENST00000440760 NAPGQ99747 312 aaPredicted RBP20.39■□□□□ 0.86
SNX17-203ENST00000440760 TLR3O15455 904 aaKnown RBP20.39■□□□□ 0.85
SNX17-203ENST00000440760 ATMINO43313 823 aaPredicted RBP20.39■□□□□ 0.85
SNX17-203ENST00000440760 FTLP02792 175 aaPredicted RBP20.39■□□□□ 0.85
SNX17-203ENST00000440760 TNNC1P63316 161 aa20.39■□□□□ 0.85
SNX17-203ENST00000440760 LRRC8DQ7L1W4 858 aa20.39■□□□□ 0.85
SNX17-203ENST00000440760 GSTCDQ8NEC7 633 aa20.39■□□□□ 0.85
SNX17-203ENST00000440760 DIS3LQ8TF46 1054 aaKnown RBP20.39■□□□□ 0.85
SNX17-203ENST00000440760 MMS19Q96T76 1030 aa20.39■□□□□ 0.85
SNX17-203ENST00000440760 ZSWIM1Q9BR11 485 aa20.39■□□□□ 0.85
SNX17-203ENST00000440760 CHORDC1Q9UHD1 332 aaPredicted RBP20.39■□□□□ 0.85
SNX17-203ENST00000440760 CTAGE9A4FU28 777 aa20.38■□□□□ 0.85
SNX17-203ENST00000440760 CD4P01730 458 aa20.38■□□□□ 0.85
SNX17-203ENST00000440760 ATP1A1P05023 1023 aaKnown RBP20.38■□□□□ 0.85
SNX17-203ENST00000440760 BPIFB4P59827 614 aa20.38■□□□□ 0.85
SNX17-203ENST00000440760 NOX5Q96PH1 765 aa20.38■□□□□ 0.85
SNX17-203ENST00000440760 PPP1R10Q96QC0 940 aaKnown RBP20.38■□□□□ 0.85
SNX17-203ENST00000440760 SCN5AQ14524 2016 aa20.38■□□□□ 0.85
SNX17-203ENST00000440760 ANO9A1A5B4 782 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 TACC1O75410 805 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 STAU1O95793 577 aaKnown RBP20.37■□□□□ 0.85
SNX17-203ENST00000440760 TFRCP02786 760 aaKnown RBP20.37■□□□□ 0.85
SNX17-203ENST00000440760 SCNN1GP51170 649 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 LBX1P52954 281 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 MYO1EQ12965 1108 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 CLEC16AQ2KHT3 1053 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 HACE1Q8IYU2 909 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 CAGE1Q8TC20 777 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 LINC01599Q8WXQ3 324 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 CTNNBL1Q8WYA6 563 aaPredicted RBP20.37■□□□□ 0.85
SNX17-203ENST00000440760 RPS6KC1Q96S38 1066 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 ISCUQ9H1K1 167 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 PDCL3Q9H2J4 239 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 GOLPH3Q9H4A6 298 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 OSGEPQ9NPF4 335 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 MIOSQ9NXC5 875 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 SNX9Q9Y5X1 595 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 NCANO14594 1321 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 ATP8B3O60423 1300 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 TANC1Q9C0D5 1861 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 ARL5CA6NH57 179 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 SPTLC1O15269 473 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 RTN2O75298 545 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 TMEM253P0C7T8 217 aa20.37■□□□□ 0.85
SNX17-203ENST00000440760 NAA35Q5VZE5 725 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms