RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 FAM213AQ9BRX8 229 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 OXCT2Q9BYC2 517 aaPredicted RBP21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 IKZF4Q9H2S9 585 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 FAM13BQ9NYF5 915 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 CFAP45Q9UL16 551 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 C2CD2Q9Y426 696 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 INSL5Q9Y5Q6 135 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 STYXL1Q9Y6J8 313 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 NUMBLQ9Y6R0 609 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 WDFY4Q6ZS81 3184 aa21.51■■□□□ 1.03
SHROOM1-204ENST00000440118 STK25O00506 426 aa21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 ABLIM3O94929 683 aa21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 CASP5P51878 434 aa21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 PTPN5P54829 565 aa21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 KCNA1Q09470 495 aa21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 HTR4Q13639 388 aa21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 IER5LQ5T953 404 aa21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 C9orf57Q5W0N0 161 aa21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 OVOS1Q6IE37 1185 aa21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 IQCEQ6IPM2 695 aa21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 TCEAL8Q8IYN2 117 aa21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 SIX5Q8N196 739 aa21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 ITFG1Q8TB96 612 aa21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 SAAL1Q96ER3 474 aa21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 TMEM206Q9H813 350 aa21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 DNMT3BQ9UBC3 853 aaKnown RBP21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 AFF4Q9UHB7 1163 aaKnown RBP21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 KCNH3Q9ULD8 1083 aa21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 NOTCH4Q99466 2003 aa21.5■■□□□ 1.03
SHROOM1-204ENST00000440118 FRMD3A2A2Y4 597 aa21.49■■□□□ 1.03
SHROOM1-204ENST00000440118 OR6C75A6NL08 312 aa21.49■■□□□ 1.03
SHROOM1-204ENST00000440118 PPEF2O14830 753 aa21.49■■□□□ 1.03
SHROOM1-204ENST00000440118 TBC1D4O60343 1298 aa21.49■■□□□ 1.03
SHROOM1-204ENST00000440118 ADRB2P07550 413 aa21.49■■□□□ 1.03
SHROOM1-204ENST00000440118 RHOP08100 348 aa21.49■■□□□ 1.03
SHROOM1-204ENST00000440118 SRFP11831 508 aa21.49■■□□□ 1.03
SHROOM1-204ENST00000440118 PTPN2P17706 415 aa21.49■■□□□ 1.03
SHROOM1-204ENST00000440118 PAX3P23760 479 aa21.49■■□□□ 1.03
SHROOM1-204ENST00000440118 LILRA4P59901 499 aa21.49■■□□□ 1.03
SHROOM1-204ENST00000440118 NHLH1Q02575 133 aa21.49■■□□□ 1.03
SHROOM1-204ENST00000440118 ARMCX5Q6P1M9 558 aa21.49■■□□□ 1.03
SHROOM1-204ENST00000440118 SLC44A3Q8N4M1 653 aa21.49■■□□□ 1.03
SHROOM1-204ENST00000440118 PGLYRP2Q96PD5 576 aa21.49■■□□□ 1.03
SHROOM1-204ENST00000440118 CORO1BQ9BR76 489 aa21.49■■□□□ 1.03
SHROOM1-204ENST00000440118 DPP3Q9NY33 737 aa21.49■■□□□ 1.03
SHROOM1-204ENST00000440118 RBAKQ9NYW8 714 aaPredicted RBP21.49■■□□□ 1.03
SHROOM1-204ENST00000440118 PRPF6O94906 941 aaKnown RBP21.48■■□□□ 1.03
SHROOM1-204ENST00000440118 OAZ2O95190 189 aa21.48■■□□□ 1.03
SHROOM1-204ENST00000440118 LDHAP00338 332 aaKnown RBP21.48■■□□□ 1.03
SHROOM1-204ENST00000440118 TYMPP19971 482 aa21.48■■□□□ 1.03
SHROOM1-204ENST00000440118 AARSP49588 968 aaKnown RBP eCLIP21.48■■□□□ 1.03
SHROOM1-204ENST00000440118 TFAMQ00059 246 aaKnown RBP21.48■■□□□ 1.03
SHROOM1-204ENST00000440118 ATL3Q6DD88 541 aa21.48■■□□□ 1.03
SHROOM1-204ENST00000440118 ASTLQ6HA08 431 aaPredicted RBP21.48■■□□□ 1.03
SHROOM1-204ENST00000440118 SHC4Q6S5L8 630 aa21.48■■□□□ 1.03
SHROOM1-204ENST00000440118 PDZD4Q76G19 769 aaPredicted RBP21.48■■□□□ 1.03
SHROOM1-204ENST00000440118 METTL23Q86XA0 190 aa21.48■■□□□ 1.03
SHROOM1-204ENST00000440118 PRSS33Q8NF86 280 aa21.48■■□□□ 1.03
SHROOM1-204ENST00000440118 SENP8Q96LD8 212 aa21.48■■□□□ 1.03
SHROOM1-204ENST00000440118 ZNF560Q96MR9 790 aa21.48■■□□□ 1.03
SHROOM1-204ENST00000440118 STRA6Q9BX79 667 aa21.48■■□□□ 1.03
SHROOM1-204ENST00000440118 MAGEF1Q9HAY2 307 aa21.48■■□□□ 1.03
SHROOM1-204ENST00000440118 CA14Q9ULX7 337 aa21.48■■□□□ 1.03
SHROOM1-204ENST00000440118 MAFFQ9ULX9 164 aa21.48■■□□□ 1.03
SHROOM1-204ENST00000440118 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 ANHXE9PGG2 379 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 POLR2DO15514 142 aaKnown RBP21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 SEC24AO95486 1093 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 OR4Q2P0C623 313 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 GARTP22102 1010 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 ADSSP30520 456 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 TAF6P49848 677 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 POU5F1Q01860 360 aaKnown RBP21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 TWF1Q12792 350 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 PLD1Q13393 1074 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 PKP1Q13835 747 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 E2F4Q16254 413 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 CYP4A22Q5TCH4 519 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 RNF19BQ6ZMZ0 732 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 NT5DC4Q86YG4 428 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 NPAS3Q8IXF0 933 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 ZNF512Q96ME7 567 aaPredicted RBP21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 PYM1Q9BRP8 204 aaKnown RBP21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 FGFBP2Q9BYJ0 223 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 TRIM9Q9C026 710 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 KBTBD4Q9NVX7 518 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 DSEQ9UL01 958 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 R3HCC1Q9Y3T6 440 aaKnown RBP21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 PIEZO1Q92508 2521 aa21.47■■□□□ 1.03
SHROOM1-204ENST00000440118 GOLGA8IPA6NC78 632 aa21.46■■□□□ 1.03
SHROOM1-204ENST00000440118 GOLGA8JA6NMD2 632 aa21.46■■□□□ 1.03
SHROOM1-204ENST00000440118 DNM1Q05193 864 aaKnown RBP21.46■■□□□ 1.03
SHROOM1-204ENST00000440118 SV2CQ496J9 727 aa21.46■■□□□ 1.03
SHROOM1-204ENST00000440118 PARM1Q6UWI2 310 aa21.46■■□□□ 1.03
SHROOM1-204ENST00000440118 BRSK2Q8IWQ3 736 aa21.46■■□□□ 1.03
SHROOM1-204ENST00000440118 EFCAB13Q8IY85 973 aa21.46■■□□□ 1.03
SHROOM1-204ENST00000440118 CACTINQ8WUQ7 758 aaKnown RBP21.46■■□□□ 1.03
SHROOM1-204ENST00000440118 FGF14Q92915 247 aa21.46■■□□□ 1.03
SHROOM1-204ENST00000440118 KXD1Q9BQD3 176 aa21.46■■□□□ 1.03
SHROOM1-204ENST00000440118 CBWD1Q9BRT8 395 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms