RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 ZNF516Q92618 1163 aa21.02■□□□□ 0.96
SEMA3B-206ENST00000439487 CLEC1BQ9P126 229 aa21.02■□□□□ 0.96
SEMA3B-206ENST00000439487 FNIP2Q9P278 1114 aa21.02■□□□□ 0.96
SEMA3B-206ENST00000439487 SIX4Q9UIU6 781 aa21.02■□□□□ 0.96
SEMA3B-206ENST00000439487 ITGA11Q9UKX5 1188 aa21.02■□□□□ 0.96
SEMA3B-206ENST00000439487 BARX2Q9UMQ3 279 aaPredicted RBP21.02■□□□□ 0.96
SEMA3B-206ENST00000439487 TIMM13Q9Y5L4 95 aaPredicted RBP21.02■□□□□ 0.96
SEMA3B-206ENST00000439487 HCFC2Q9Y5Z7 792 aa21.02■□□□□ 0.96
SEMA3B-206ENST00000439487 VCANP13611 3396 aa21.02■□□□□ 0.96
SEMA3B-206ENST00000439487 DOCK6Q96HP0 2047 aa21.01■□□□□ 0.95
SEMA3B-206ENST00000439487 FSD2A1L4K1 749 aa21.01■□□□□ 0.95
SEMA3B-206ENST00000439487 LRRIQ3A6PVS8 624 aaPredicted RBP21.01■□□□□ 0.95
SEMA3B-206ENST00000439487 ADH1AP07327 375 aa21.01■□□□□ 0.95
SEMA3B-206ENST00000439487 EPCAMP16422 314 aa21.01■□□□□ 0.95
SEMA3B-206ENST00000439487 PPP1R2P41236 205 aa21.01■□□□□ 0.95
SEMA3B-206ENST00000439487 CLCN4P51793 760 aa21.01■□□□□ 0.95
SEMA3B-206ENST00000439487 DLG4P78352 724 aa21.01■□□□□ 0.95
SEMA3B-206ENST00000439487 CLUL1Q15846 466 aa21.01■□□□□ 0.95
SEMA3B-206ENST00000439487 VARS2Q5ST30 1063 aaKnown RBP21.01■□□□□ 0.95
SEMA3B-206ENST00000439487 PDXDC1Q6P996 788 aa21.01■□□□□ 0.95
SEMA3B-206ENST00000439487 PPFIBP1Q86W92 1011 aa21.01■□□□□ 0.95
SEMA3B-206ENST00000439487 PALB2Q86YC2 1186 aa21.01■□□□□ 0.95
SEMA3B-206ENST00000439487 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.01■□□□□ 0.95
SEMA3B-206ENST00000439487 NELFBQ8WX92 580 aa21.01■□□□□ 0.95
SEMA3B-206ENST00000439487 SENP8Q96LD8 212 aa21.01■□□□□ 0.95
SEMA3B-206ENST00000439487 CLSTN3Q9BQT9 956 aa21.01■□□□□ 0.95
SEMA3B-206ENST00000439487 CTNND2Q9UQB3 1225 aa21.01■□□□□ 0.95
SEMA3B-206ENST00000439487 CETN3O15182 167 aa21■□□□□ 0.95
SEMA3B-206ENST00000439487 ADAM12O43184 909 aa21■□□□□ 0.95
SEMA3B-206ENST00000439487 PSMC2P35998 433 aaKnown RBP21■□□□□ 0.95
SEMA3B-206ENST00000439487 RBP5P82980 135 aa21■□□□□ 0.95
SEMA3B-206ENST00000439487 CREMQ03060 361 aa21■□□□□ 0.95
SEMA3B-206ENST00000439487 RSPO2Q6UXX9 243 aaPredicted RBP21■□□□□ 0.95
SEMA3B-206ENST00000439487 TMEM184AQ6ZMB5 413 aa21■□□□□ 0.95
SEMA3B-206ENST00000439487 ANKS3Q6ZW76 656 aa21■□□□□ 0.95
SEMA3B-206ENST00000439487 TRAPPC11Q7Z392 1133 aa21■□□□□ 0.95
SEMA3B-206ENST00000439487 FAM186BQ8IYM0 893 aa21■□□□□ 0.95
SEMA3B-206ENST00000439487 APPL2Q8NEU8 664 aa21■□□□□ 0.95
SEMA3B-206ENST00000439487 BORCS6Q96GS4 357 aa21■□□□□ 0.95
SEMA3B-206ENST00000439487 ZNF560Q96MR9 790 aa21■□□□□ 0.95
SEMA3B-206ENST00000439487 MTRRQ9UBK8 725 aa21■□□□□ 0.95
SEMA3B-206ENST00000439487 C2orf16Q68DN1 1984 aa20.99■□□□□ 0.95
SEMA3B-206ENST00000439487 MAPK13O15264 365 aa20.99■□□□□ 0.95
SEMA3B-206ENST00000439487 PAX3P23760 479 aa20.99■□□□□ 0.95
SEMA3B-206ENST00000439487 STX17P56962 302 aa20.99■□□□□ 0.95
SEMA3B-206ENST00000439487 LRRC63Q05C16 580 aa20.99■□□□□ 0.95
SEMA3B-206ENST00000439487 BFSP1Q12934 665 aa20.99■□□□□ 0.95
SEMA3B-206ENST00000439487 MRPL58Q14197 206 aaKnown RBP20.99■□□□□ 0.95
SEMA3B-206ENST00000439487 SV2CQ496J9 727 aa20.99■□□□□ 0.95
SEMA3B-206ENST00000439487 TMC2Q8TDI7 906 aa20.99■□□□□ 0.95
SEMA3B-206ENST00000439487 CASP10Q92851 521 aa20.99■□□□□ 0.95
SEMA3B-206ENST00000439487 R3HCC1Q9Y3T6 440 aaKnown RBP20.99■□□□□ 0.95
SEMA3B-206ENST00000439487 BACE2Q9Y5Z0 518 aa20.99■□□□□ 0.95
SEMA3B-206ENST00000439487 KPNA7A9QM74 516 aa20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 CYB561D2O14569 222 aa20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 MBD3O95983 291 aa20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 CST3P01034 146 aaPredicted RBP20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 SPATA31D3P0C874 917 aa20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 SRGAP2BP0DMP2 458 aa20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 OR1D2P34982 312 aa20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 PNPLA4P41247 253 aa20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 VAMP7P51809 220 aa20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 MRPS5P82675 430 aaKnown RBP20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 FKBP3Q00688 224 aaKnown RBP20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 LEXMQ3ZCV2 418 aa20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 C1orf220Q5T0J3 134 aa20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 ANKRD54Q6NXT1 300 aa20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 SPATA31D4Q6ZUB0 917 aa20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 ZC3H3Q8IXZ2 948 aaKnown RBP20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 LRRC52Q8N7C0 313 aa20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 ATXN2LQ8WWM7 1075 aaKnown RBP20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 MSLNLQ96KJ4 702 aa20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 DUSP9Q99956 384 aaKnown RBP20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 APOL5Q9BWW9 433 aa20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 CD207Q9UJ71 328 aa20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 CDY1Q9Y6F8 540 aa20.98■□□□□ 0.95
SEMA3B-206ENST00000439487 H7C4K7 107 aa20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 TGM5O43548 720 aa20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 TBC1D4O60343 1298 aa20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 GLUD1P00367 558 aa20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 ODC1P11926 461 aa20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 KRT13P13646 458 aa20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 TYMPP19971 482 aa20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 KCNQ1P51787 676 aa20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 CLDN10P78369 228 aa20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 YWHAHQ04917 246 aaPredicted RBP20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 PAK1Q13153 545 aa20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 CTXN3Q4LDR2 81 aa20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 TTI2Q6NXR4 508 aa20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 INTS8Q75QN2 995 aaKnown RBP20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 USP37Q86T82 979 aa20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 MKNK1Q9BUB5 465 aa20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 COL25A1Q9BXS0 654 aaPredicted RBP20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 FBXL5Q9UKA1 691 aa20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 C5orf42Q9H799 3197 aa20.97■□□□□ 0.95
SEMA3B-206ENST00000439487 BICDL2A1A5D9 508 aa20.96■□□□□ 0.95
SEMA3B-206ENST00000439487 PHACTR2O75167 634 aa20.96■□□□□ 0.95
SEMA3B-206ENST00000439487 C4BPAP04003 597 aaKnown RBP20.96■□□□□ 0.95
SEMA3B-206ENST00000439487 TRIM49P0CI25 452 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms