RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 PHTF1Q9UMS5 762 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 SLC12A4Q9UP95 1085 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 EXOC7Q9UPT5 735 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 AHDC1Q5TGY3 1603 aaPredicted RBP10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 PLIN4Q96Q06 1357 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 CFAP73A6NFT4 308 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 PHF2O75151 1096 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 TMEM253P0C7T8 217 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 NSFP46459 744 aaKnown RBP10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 KPNB1Q14974 876 aaKnown RBP10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 PKN2Q16513 984 aaKnown RBP10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 ATP13A4Q4VNC1 1196 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 DCUN1D2Q6PH85 259 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 DSTYKQ6XUX3 929 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 THNSL1Q8IYQ7 743 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 CCDC33Q8N5R6 958 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 FAM13CQ8NE31 585 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 PLEKHO2Q8TD55 490 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 TLCD1Q96CP7 247 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 PRR11Q96HE9 360 aaPredicted RBP10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 L3MBTL3Q96JM7 780 aaPredicted RBP10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 TARS2Q9BW92 718 aaKnown RBP10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 CYP4F11Q9HBI6 524 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 ZNRF3Q9ULT6 936 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 R3HDM2Q9Y2K5 976 aaKnown RBP10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 STK24Q9Y6E0 443 aa10.52□□□□□ -0.73
CDC42SE1-202ENST00000439374 MYH4Q9Y623 1939 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 ICAM1P05362 532 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 VCAM1P19320 739 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 ALDH3A1P30838 453 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 EPHB1P54762 984 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 PSMC5P62195 406 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 TFAMQ00059 246 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 LAMB3Q13751 1172 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 KRT39Q6A163 491 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 ANO7Q6IWH7 933 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 SV2AQ7L0J3 742 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 ZBTB46Q86UZ6 589 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 CTAGE3PQ8IX95 158 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 ZBED8Q8IZ13 594 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 PPP1R13LQ8WUF5 828 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 POLR3FQ9H1D9 316 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 AGO4Q9HCK5 861 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 GRHL1Q9NZI5 618 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 WASF2Q9Y6W5 498 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 ZMYM2Q9UBW7 1377 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 A0A1W2PPM1 405 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 KLRG2A4D1S0 409 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 EIF3DO15371 548 aaKnown RBP eCLIP10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 GYG2O15488 501 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 CCNE2O96020 404 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 RRM1P23921 792 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 COILP38432 576 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 IL9RQ01113 521 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 CDR2Q01850 454 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 KLC1Q07866 573 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 THOC5Q13769 683 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 EFTUD2Q15029 972 aaKnown RBP eCLIP10.51□□□□□ -0.731e-8■■■□□ 19.1
CDC42SE1-202ENST00000439374 KHDC1Q4VXA5 237 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 BRDTQ58F21 947 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 TTC7BQ86TV6 843 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 AGR3Q8TD06 166 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 USP6NLQ92738 828 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 FGD4Q96M96 766 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 DENND2DQ9H6A0 471 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 ZDHHC18Q9NUE0 388 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 RAB20Q9NX57 234 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 SEL1LQ9UBV2 794 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 TBX20Q9UMR3 447 aa10.51□□□□□ -0.73
CDC42SE1-202ENST00000439374 MEI4A8MW99 385 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 K7ERI5 159 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 NVLO15381 856 aaKnown RBP10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 ENO1P06733 434 aaKnown RBP10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 NRLP54845 237 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 MARSP56192 900 aaKnown RBP10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 LACTB2Q53H82 288 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 TMCO4Q5TGY1 634 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 STYK1Q6J9G0 422 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 ZNF572Q7Z3I7 529 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 FBXL13Q8NEE6 735 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 B4GALNT2Q8NHY0 566 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 BSNDQ8WZ55 320 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 PPP1R36Q96LQ0 422 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 PDCD2LQ9BRP1 358 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 TMEM59LQ9UK28 342 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 MAGED2Q9UNF1 606 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 PCDHA10Q9Y5I2 948 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 AK5Q9Y6K8 562 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 FRMPD4Q14CM0 1322 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 DDX3YO15523 660 aaKnown RBP10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 POTEJP0CG39 1038 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 RPA3P35244 121 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 SLC8A3P57103 927 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 P3H1Q32P28 736 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 IZUMO3Q5VZ72 239 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 OLFML2BQ68BL8 750 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 VSTM1Q6UX27 236 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 PIGWQ7Z7B1 504 aa10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 NMD3Q96D46 503 aaKnown RBP10.5□□□□□ -0.73
CDC42SE1-202ENST00000439374 KREMEN1Q96MU8 473 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms