RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 GOLGA6L6A8MZA4 724 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 B4GALT3O60512 393 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 B3GAT3O94766 335 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 NOL4O94818 638 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 GALTP07902 379 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 PPM1AP35813 382 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 OR1G1P47890 313 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 BCAR1P56945 870 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 TNNC1P63316 161 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 MLLT1Q03111 559 aaPredicted RBP13.61□□□□□ -0.23
SCLT1-202ENST00000439369 ELAVL2Q12926 359 aaKnown RBP13.61□□□□□ -0.23
SCLT1-202ENST00000439369 CUL2Q13617 745 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 WDR72Q3MJ13 1102 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 PAN2Q504Q3 1202 aaKnown RBP13.61□□□□□ -0.23
SCLT1-202ENST00000439369 PHLDB3Q6NSJ2 640 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 FAM117BQ6P1L5 589 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 ZNF397Q8NF99 534 aaPredicted RBP13.61□□□□□ -0.23
SCLT1-202ENST00000439369 CLP1Q92989 425 aaKnown RBP13.61□□□□□ -0.23
SCLT1-202ENST00000439369 ZNF558Q96NG5 402 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 NAA15Q9BXJ9 866 aaKnown RBP13.61□□□□□ -0.23
SCLT1-202ENST00000439369 BCO2Q9BYV7 579 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 TTYH3Q9C0H2 523 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 DNAJB4Q9UDY4 337 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 DSEQ9UL01 958 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 NUB1Q9Y5A7 615 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 PCDHA11Q9Y5I1 949 aa13.61□□□□□ -0.23
SCLT1-202ENST00000439369 M0QZQ0 153 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 NRP1O14786 923 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 PPEF2O14830 753 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 TACC1O75410 805 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 KIF4AO95239 1232 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 SLC11A1P49279 550 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 TBX2Q13207 712 aaPredicted RBP13.6□□□□□ -0.23
SCLT1-202ENST00000439369 KCNT2Q6UVM3 1135 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 PPFIBP1Q86W92 1011 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 TMEM86AQ8N2M4 240 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 PPM1KQ8N3J5 372 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 TOP6BLQ8N6T0 577 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 SUSD3Q96L08 255 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 SAMD11Q96NU1 681 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 PI4K2AQ9BTU6 479 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 STK33Q9BYT3 514 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 DNAI2Q9GZS0 605 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 APOBEC3GQ9HC16 384 aaKnown RBP13.6□□□□□ -0.23
SCLT1-202ENST00000439369 PCDH10Q9P2E7 1040 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 DNAJC12Q9UKB3 198 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 ADAM28Q9UKQ2 775 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 CAPN11Q9UMQ6 739 aa13.6□□□□□ -0.23
SCLT1-202ENST00000439369 MRPL42Q9Y6G3 142 aaKnown RBP13.6□□□□□ -0.23
SCLT1-202ENST00000439369 SF3B1O75533 1304 aaKnown RBP eCLIP13.6□□□□□ -0.231e-6■■■■■ 152.9
SCLT1-202ENST00000439369 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.59□□□□□ -0.23
SCLT1-202ENST00000439369 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.59□□□□□ -0.23
SCLT1-202ENST00000439369 A0A1W2PPC1 479 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 SPTLC1O15269 473 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 HUS1O60921 280 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 TADA2AO75478 443 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 GYPCP04921 128 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 CYP11A1P05108 521 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 ODC1P11926 461 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 TYMPP19971 482 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 ASPAP45381 313 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 KLK7P49862 253 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 POLR2FP61218 127 aaKnown RBP13.59□□□□□ -0.23
SCLT1-202ENST00000439369 ZBED6P86452 979 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 ARID5BQ14865 1188 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 RAB30Q15771 203 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 IQCEQ6IPM2 695 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 CD300LGQ6UXG3 332 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 CACNA2D4Q7Z3S7 1137 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 TMC6Q7Z403 805 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 TMCO2Q7Z6W1 182 aaPredicted RBP13.59□□□□□ -0.23
SCLT1-202ENST00000439369 CNGA4Q8IV77 575 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 ARHGEF19Q8IW93 802 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 DRC7Q8IY82 874 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 GPR65Q8IYL9 337 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 TDHQ8IZJ6 230 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 SLC39A11Q8N1S5 342 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 COLGALT1Q8NBJ5 622 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 C3orf58Q8NDZ4 430 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 APPL2Q8NEU8 664 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 SHC3Q92529 594 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 SYN2Q92777 582 aaPredicted RBP13.59□□□□□ -0.23
SCLT1-202ENST00000439369 TATDN2Q93075 761 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 PDLIM2Q96JY6 352 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 SENP8Q96LD8 212 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 PAAF1Q9BRP4 392 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 PLVAPQ9BX97 442 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 UBE2TQ9NPD8 197 aaPredicted RBP13.59□□□□□ -0.23
SCLT1-202ENST00000439369 SPG21Q9NZD8 308 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 NXF1Q9UBU9 619 aaKnown RBP13.59□□□□□ -0.23
SCLT1-202ENST00000439369 PCDHB8Q9UN66 801 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 CNTN6Q9UQ52 1028 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 LUC7L2Q9Y383 392 aaKnown RBP13.59□□□□□ -0.23
SCLT1-202ENST00000439369 PCDHB12Q9Y5F1 795 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 SNX9Q9Y5X1 595 aa13.59□□□□□ -0.23
SCLT1-202ENST00000439369 CYB561D2O14569 222 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 SYN3O14994 580 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 EPHB6O15197 1021 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 LRRN2O75325 713 aa13.58□□□□□ -0.24
SCLT1-202ENST00000439369 CLSTN1O94985 981 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms