RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 MAPK4P31152 587 aa14.37□□□□□ -0.11
PCNX3-202ENST00000439247 MAPK6Q16659 721 aa14.37□□□□□ -0.11
PCNX3-202ENST00000439247 PCNX4Q63HM2 1172 aa14.37□□□□□ -0.11
PCNX3-202ENST00000439247 NLRP9Q7RTR0 991 aa14.37□□□□□ -0.11
PCNX3-202ENST00000439247 ENDOVQ8N8Q3 282 aaKnown RBP14.37□□□□□ -0.11
PCNX3-202ENST00000439247 LRRC8CQ8TDW0 803 aa14.37□□□□□ -0.11
PCNX3-202ENST00000439247 CPA5Q8WXQ8 436 aa14.37□□□□□ -0.11
PCNX3-202ENST00000439247 ZNF333Q96JL9 665 aa14.37□□□□□ -0.11
PCNX3-202ENST00000439247 KLF6Q99612 283 aaPredicted RBP14.37□□□□□ -0.11
PCNX3-202ENST00000439247 CPSF2Q9P2I0 782 aaKnown RBP14.37□□□□□ -0.11
PCNX3-202ENST00000439247 ANKRD33BA6NCL7 494 aa14.37□□□□□ -0.11
PCNX3-202ENST00000439247 GOLGA8RI6L899 631 aa14.37□□□□□ -0.11
PCNX3-202ENST00000439247 NVLO15381 856 aaKnown RBP14.37□□□□□ -0.11
PCNX3-202ENST00000439247 GAS8O95995 478 aa14.37□□□□□ -0.11
PCNX3-202ENST00000439247 MRPS35P82673 323 aaKnown RBP14.37□□□□□ -0.11
PCNX3-202ENST00000439247 KPNB1Q14974 876 aaKnown RBP14.37□□□□□ -0.11
PCNX3-202ENST00000439247 CCDC6Q16204 474 aa14.37□□□□□ -0.11
PCNX3-202ENST00000439247 FAM71AQ8IYT1 594 aa14.37□□□□□ -0.11
PCNX3-202ENST00000439247 FAM136AQ96C01 138 aa14.37□□□□□ -0.11
PCNX3-202ENST00000439247 KANSL3Q9P2N6 904 aa14.37□□□□□ -0.11
PCNX3-202ENST00000439247 FAM198AQ9UFP1 575 aa14.37□□□□□ -0.11
PCNX3-202ENST00000439247 SERPINA10Q9UK55 444 aa14.37□□□□□ -0.11
PCNX3-202ENST00000439247 USP20Q9Y2K6 914 aa14.37□□□□□ -0.11
PCNX3-202ENST00000439247 PSME4Q14997 1843 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 IGLV3-22A0A075B6J6 115 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 CFAP69A5D8W1 941 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 TMEM150BA6NC51 233 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 TBX3O15119 743 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 MTA2O94776 668 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 CD58P19256 250 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 AP3B2Q13367 1082 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 EFTUD2Q15029 972 aaKnown RBP eCLIP14.36□□□□□ -0.111e-6■■■■■ 28.9
PCNX3-202ENST00000439247 ACSBG2Q5FVE4 666 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 SNX30Q5VWJ9 437 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 OR52E8Q6IFG1 317 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 ZNF365Q70YC5 407 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 GSTA5Q7RTV2 222 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 ZC3H18Q86VM9 953 aaKnown RBP14.36□□□□□ -0.11
PCNX3-202ENST00000439247 CCNJLQ8IV13 435 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 TAB3Q8N5C8 712 aaPredicted RBP14.36□□□□□ -0.11
PCNX3-202ENST00000439247 SCG3Q8WXD2 468 aaKnown RBP14.36□□□□□ -0.11
PCNX3-202ENST00000439247 INPP5DQ92835 1189 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 MAK16Q9BXY0 300 aaKnown RBP14.36□□□□□ -0.11
PCNX3-202ENST00000439247 ARL8BQ9NVJ2 186 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 ASB3Q9Y575 518 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 GOLGA8SH3BPF8 625 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 GOLGA8MH3BSY2 632 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 ATP9AO75110 1047 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 TCEA3O75764 348 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 YBX3P16989 372 aaKnown RBP eCLIP14.36□□□□□ -0.112e-6■■■□□ 16.7
PCNX3-202ENST00000439247 SPARCL1Q14515 664 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 C4orf50Q6ZRC1 276 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 CEP120Q8N960 986 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 RBBP8NLQ8NC74 664 aaPredicted RBP14.36□□□□□ -0.11
PCNX3-202ENST00000439247 WDR60Q8WVS4 1066 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 SLCO2A1Q92959 643 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 PI4K2AQ9BTU6 479 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 AMNQ9BXJ7 453 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 GTF3C4Q9UKN8 822 aa14.36□□□□□ -0.11
PCNX3-202ENST00000439247 A0A0G2JND7 137 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 SIGLEC16A6NMB1 481 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 SORBS3O60504 671 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 GDF11O95390 407 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 ADRB2P07550 413 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 ACADSP16219 412 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 PIK3CAP42336 1068 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 SSR1P43307 286 aaKnown RBP14.35□□□□□ -0.11
PCNX3-202ENST00000439247 NOP14P78316 857 aaKnown RBP14.35□□□□□ -0.11
PCNX3-202ENST00000439247 CTC1Q2NKJ3 1217 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 TSNAXIP1Q2TAA8 658 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 ATP13A4Q4VNC1 1196 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 KAZNQ674X7 775 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 CIAPIN1Q6FI81 312 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 LVRNQ6Q4G3 990 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 MOXD1Q6UVY6 613 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 SH3BP5LQ7L8J4 393 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 FBXO11Q86XK2 927 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 SIAH1Q8IUQ4 282 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 ATL2Q8NHH9 583 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 FBXO6Q9NRD1 293 aaPredicted RBP14.35□□□□□ -0.11
PCNX3-202ENST00000439247 USTQ9Y2C2 406 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 NEU2Q9Y3R4 380 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 MROH7Q68CQ1 1323 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 ZNF541Q9H0D2 1346 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 DDTLA6NHG4 134 aaPredicted RBP14.35□□□□□ -0.11
PCNX3-202ENST00000439247 PI4K2BG5E9Z4 385 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 DCTN3O75935 186 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 CFBP00751 764 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 GZMAP12544 262 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 PLS3P13797 630 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 ADRA1DP25100 572 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 MARK3P27448 753 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 CDR2Q01850 454 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 GAD2Q05329 585 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 STAT4Q14765 748 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 TCEAL1Q15170 157 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 CLNKQ7Z7G1 428 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 ANKMY2Q8IV38 441 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 VPS37BQ9H9H4 285 aa14.35□□□□□ -0.11
PCNX3-202ENST00000439247 GJA3Q9Y6H8 435 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms