RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 SREBF1P36956 1147 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 OCA2Q04671 838 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 UBXN2BQ14CS0 331 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 ADRM1Q16186 407 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 MUM1Q2TAK8 710 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 LRCH2Q5VUJ6 765 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 AFMIDQ63HM1 303 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 RNF180Q86T96 592 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 FATE1Q969F0 183 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 FUBP1Q96AE4 644 aaKnown RBP4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 QRSL1Q9H0R6 528 aaKnown RBP4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 RNPEPQ9H4A4 650 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 IFT122Q9HBG6 1241 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 MOCS1Q9NZB8 636 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 SCOCQ9UIL1 159 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 ITSN2Q9NZM3 1697 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 NAV2Q8IVL1 2488 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 ABCA9Q8IUA7 1624 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 FAM135AQ9P2D6 1515 aa4.05□□□□□ -1.76
HMGB1P18-201ENST00000438801 MAP3K5Q99683 1374 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 FLNBO75369 2602 aaKnown RBP4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 GOLGA8AA7E2F4 631 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 ENPP3O14638 875 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 C1RP00736 705 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 MTHFD2P13995 350 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 ATP5JP18859 108 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 FGFR4P22455 802 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 PER3P56645 1201 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 CXADRP78310 365 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 STRN3Q13033 797 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 MUM1L1Q5H9M0 696 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 Q6ZNX1 250 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 CMIPQ8IY22 773 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 FAM43AQ8N2R8 423 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 PQLC1Q8N2U9 271 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 TGFBRAP1Q8WUH2 860 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 LMBR1Q8WVP7 490 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 STON2Q8WXE9 905 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 RNF31Q96EP0 1072 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 BOD1Q96IK1 185 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 LRFN3Q9BTN0 628 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 DUSP26Q9BV47 211 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 SPATA5L1Q9BVQ7 753 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 ACE2Q9BYF1 805 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 GREM2Q9H772 168 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 RBM12Q9NTZ6 932 aaKnown RBP4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 TMEM74BQ9NUR3 256 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 TBCCD1Q9NVR7 557 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 GLI3P10071 1580 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 ABCC1P33527 1531 aa4.04□□□□□ -1.76
HMGB1P18-201ENST00000438801 GPR179Q6PRD1 2367 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 SPTBN5Q9NRC6 3674 aaKnown RBP4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 CCDC78A2IDD5 438 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 GPANK1O95872 356 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 GCSHP23434 173 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 GUCY1A2P33402 732 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 ALDH1A3P47895 512 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 GYS2P54840 703 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 HSD11B2P80365 405 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 SIM1P81133 766 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 PPP3CAQ08209 521 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 ZNF169Q14929 603 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 TAF7LQ5H9L4 462 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 ZNF362Q5T0B9 420 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 KCNK18Q7Z418 384 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 THNSL2Q86YJ6 484 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 HOXB13Q92826 284 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 ORAI2Q96SN7 254 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 SENP6Q9GZR1 1112 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 KIAA1586Q9HCI6 787 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 GALNT9Q9HCQ5 603 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 NMRK2Q9NPI5 230 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 CASS4Q9NQ75 786 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 LANCL2Q9NS86 450 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 FAM30AQ9NZY2 134 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 SIK3Q9Y2K2 1263 aa4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 FASNP49327 2511 aaKnown RBP4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 COL11A2P13942 1736 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P18-201ENST00000438801 USP9XQ93008 2570 aaPredicted RBP4.03□□□□□ -1.77
HMGB1P18-201ENST00000438801 TIAM1Q13009 1591 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 AGLP35573 1532 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 PRSS23O95084 383 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 IGLV2-14P01704 120 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 CDK4P11802 303 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 SLC6A2P23975 617 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 RARRES1P49788 294 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 CYP2A13Q16696 494 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 ANO4Q32M45 955 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 TOR2AQ5JU69 321 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 OTUD7BQ6GQQ9 843 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 ZNF529Q6P280 563 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 FOXR2Q6PJQ5 311 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 STRA8Q7Z7C7 330 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 NPM2Q86SE8 214 aaKnown RBP4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 UBR7Q8N806 425 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 CASKIN2Q8WXE0 1202 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 NACC2Q96BF6 587 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 ADI1Q9BV57 179 aa4.02□□□□□ -1.77
HMGB1P18-201ENST00000438801 LDAHQ9H6V9 325 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 133.9 ms