RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 EMC4Q5J8M3 183 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 CFAP58Q5T655 872 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 IZUMO3Q5VZ72 239 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 ABRAXAS1Q6UWZ7 409 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 CCBE1Q6UXH8 406 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 RFX8Q6ZV50 586 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 BTN2A1Q7KYR7 527 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 GALNTL5Q7Z4T8 443 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 KIF18BQ86Y91 864 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 KIAA0319LQ8IZA0 1049 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 CACNA2D3Q8IZS8 1091 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 Q8N1Y9 231 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 STPG3Q8N7X2 389 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 CLRN3Q8NCR9 226 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 SIMC1Q8NDZ2 872 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 TRAPPC12Q8WVT3 735 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 TAF4BQ92750 862 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 MRGPRX3Q96LB0 322 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZSCAN31Q96LW9 406 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 JAKMIP1Q96N16 626 aaKnown RBP4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 OR14A2Q96R54 314 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 NCAPGQ9BPX3 1015 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 GPATCH1Q9BRR8 931 aaKnown RBP4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 TMEM60Q9H2L4 133 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 TRPV4Q9HBA0 871 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 DACT1Q9NYF0 836 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 AASSQ9UDR5 926 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZFP69BQ9UJL9 534 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 ATP6V0A2Q9Y487 856 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 MRFAP1Q9Y605 127 aa4.08□□□□□ -1.76
HMGB1P12-201ENST00000438594 NISCHQ9Y2I1 1504 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 A0A1W2PPH5 198 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 FAM227AF5H4B4 570 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 INO80B-WBP1J3KQ70 363 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 CBX4O00257 560 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 MPHOSPH10O00566 681 aaKnown RBP4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 TBX1O43435 398 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 AKR1B10O60218 316 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 DOK2O60496 412 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 USO1O60763 962 aaKnown RBP4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 ULK1O75385 1050 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 TPPPO94811 219 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 MT-ND3P03897 115 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZNF888P0CJ79 500 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZBTB48P10074 688 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 PEX2P28328 305 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 HOXC12P31275 282 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 LTBRP36941 435 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 LSSP48449 732 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 FXR1P51114 621 aaKnown RBP eCLIP4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 CASP5P51878 434 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 NR1H2P55055 460 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 NAP1L1P55209 391 aaKnown RBP4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 TPD52P55327 224 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 MRPS35P82673 323 aaKnown RBP4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 CYP4F3Q08477 520 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 USP10Q14694 798 aaKnown RBP4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 TAF5Q15542 800 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 OTUD6AQ7L8S5 288 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 KDELC2Q7Z4H8 507 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 NLRP14Q86W24 1093 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 EPHX4Q8IUS5 362 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 TRIM48Q8IWZ4 208 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 RBM12BQ8IXT5 1001 aaKnown RBP4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 AMER2Q8N7J2 671 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 DTX3Q8N9I9 347 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZMIZ2Q8NF64 920 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 PHOSPHO1Q8TCT1 267 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 UCMAQ8WVF2 138 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 GIMAP1Q8WWP7 306 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 EDAQ92838 391 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 ARL8AQ96BM9 186 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 AJUBAQ96IF1 538 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 WNK4Q96J92 1243 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 UROC1Q96N76 676 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 PI4K2AQ9BTU6 479 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 TXLNGYQ9BZA5 131 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 CCDC68Q9H2F9 335 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 C12orf65Q9H3J6 166 aaKnown RBP4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZWILCHQ9H900 591 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZNF277Q9NRM2 450 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 OLA1Q9NTK5 396 aaKnown RBP4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 SPTLC3Q9NUV7 552 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 TRMT1Q9NXH9 659 aaKnown RBP4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 HOXC10Q9NYD6 342 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 ARHGAP20Q9P2F6 1191 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 ASH2LQ9UBL3 628 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 L1RE1Q9UN81 338 aa4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 RRP7AQ9Y3A4 280 aaKnown RBP4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 REXO2Q9Y3B8 237 aaKnown RBP4.07□□□□□ -1.76
HMGB1P12-201ENST00000438594 USP19O94966 1318 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 KLHL33A6NCF5 533 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 B4E1Z4 1266 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 H0Y858 1186 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 H3BML4 177 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 ARNTLO00327 626 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 PLOD2O00469 737 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 ADAMTS3O15072 1205 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 KPNA5O15131 536 aa4.06□□□□□ -1.76
HMGB1P12-201ENST00000438594 PLSCR1O15162 318 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms