RNA–Protein interactions for RNA: ENST00000438497.5

SCRN1-208, Transcript of secernin 1, humanhuman

TSL 4

Gene SCRN1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-208ENST00000438497 BAG4O95429 457 aaKnown RBP9.5□□□□□ -0.89
SCRN1-208ENST00000438497 PRKCBP05771 671 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 LIG1P18858 919 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 GRSF1Q12849 480 aaKnown RBP eCLIP9.5□□□□□ -0.89
SCRN1-208ENST00000438497 PRPF4BQ13523 1007 aaKnown RBP9.5□□□□□ -0.89
SCRN1-208ENST00000438497 MRPL58Q14197 206 aaKnown RBP9.5□□□□□ -0.89
SCRN1-208ENST00000438497 KRT32Q14532 448 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 GSE1Q14687 1217 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 FAM187BQ17R55 369 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 ITPRIPL2Q3MIP1 535 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 CTXN3Q4LDR2 81 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 GLRA4Q5JXX5 417 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 KIAA1211LQ6NV74 962 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 ZBTB8OSQ8IWT0 167 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 C3orf58Q8NDZ4 430 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 DEFB124Q8NES8 71 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 HAS1Q92839 578 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 BRF1Q92994 677 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 CCDC43Q96MW1 224 aaKnown RBP9.5□□□□□ -0.89
SCRN1-208ENST00000438497 LRRC3BQ96PB8 259 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 PDZD7Q9H5P4 517 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 GOLGA2P5Q9HBQ8 144 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 ANKFY1Q9P2R3 1169 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 FBXL5Q9UKA1 691 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 TPCN1Q9ULQ1 816 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 USP20Q9Y2K6 914 aa9.5□□□□□ -0.89
SCRN1-208ENST00000438497 NUP205Q92621 2012 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 PCNX2A6NKB5 2137 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 ABCA7Q8IZY2 2146 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 SMIM28A0A1B0GU29 152 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 LNP1A1A4G5 178 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 M0R2N6 131 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 ACKR2O00590 384 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 SYN3O14994 580 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 CCNT1O60563 726 aaKnown RBP9.49□□□□□ -0.89
SCRN1-208ENST00000438497 CPA1P15085 419 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 GBP1P32455 592 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 RDXP35241 583 aaKnown RBP9.49□□□□□ -0.89
SCRN1-208ENST00000438497 CCT2P78371 535 aaKnown RBP9.49□□□□□ -0.89
SCRN1-208ENST00000438497 IRX4P78413 519 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 TNK2Q07912 1038 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 SSRP1Q08945 709 aaKnown RBP9.49□□□□□ -0.89
SCRN1-208ENST00000438497 EEF1DP3Q658K8 133 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 KRT25Q7Z3Z0 450 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 PDZD3Q86UT5 571 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 EIF2AK1Q9BQI3 630 aaKnown RBP9.49□□□□□ -0.89
SCRN1-208ENST00000438497 ATXN3LQ9H3M9 355 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 SLC32A1Q9H598 525 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 GKN1Q9NS71 199 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 POLR3BQ9NW08 1133 aaPredicted RBP9.49□□□□□ -0.89
SCRN1-208ENST00000438497 THG1LQ9NWX6 298 aaKnown RBP9.49□□□□□ -0.89
SCRN1-208ENST00000438497 KLK13Q9UKR3 277 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 NUB1Q9Y5A7 615 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 ARID2Q68CP9 1835 aa9.49□□□□□ -0.89
SCRN1-208ENST00000438497 THADAQ6YHU6 1953 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 CCDC194A0A1B0GVG4 234 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 EIF4E1BA6NMX2 242 aaKnown RBP9.48□□□□□ -0.89
SCRN1-208ENST00000438497 PATE3B3GLJ2 98 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 LYPLA2O95372 231 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 SEC24BO95487 1268 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 XRCC6P12956 609 aaKnown RBP eCLIP9.48□□□□□ -0.89
SCRN1-208ENST00000438497 CPB1P15086 417 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 MARCKSP29966 332 aaPredicted RBP9.48□□□□□ -0.89
SCRN1-208ENST00000438497 EPHB3P54753 998 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 CACNB1Q02641 598 aaPredicted RBP9.48□□□□□ -0.89
SCRN1-208ENST00000438497 MAPK6Q16659 721 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 TMEM196Q5HYL7 178 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 STXBP5Q5T5C0 1151 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 GALNT17Q6IS24 598 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 FSTL4Q6MZW2 842 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 RNF19BQ6ZMZ0 732 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 NEK8Q86SG6 692 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 PROSER1Q86XN7 944 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 TRIM22Q8IYM9 498 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 BPIFB1Q8TDL5 484 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 PIGOQ8TEQ8 1089 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 HHIPQ96QV1 700 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 HSD17B14Q9BPX1 270 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 LRRC3Q9BY71 257 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 C2orf40Q9H1Z8 148 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 GPRC5CQ9NQ84 441 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 OBP2AQ9NY56 170 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 INVSQ9Y283 1065 aa9.48□□□□□ -0.89
SCRN1-208ENST00000438497 LAMA1P25391 3075 aa9.47□□□□□ -0.89
SCRN1-208ENST00000438497 PODXLO00592 558 aa9.47□□□□□ -0.89
SCRN1-208ENST00000438497 TRDMT1O14717 391 aaKnown RBP9.47□□□□□ -0.89
SCRN1-208ENST00000438497 MEFVO15553 781 aaPredicted RBP9.47□□□□□ -0.89
SCRN1-208ENST00000438497 USO1O60763 962 aaKnown RBP9.47□□□□□ -0.89
SCRN1-208ENST00000438497 RNF40O75150 1001 aa9.47□□□□□ -0.89
SCRN1-208ENST00000438497 PDIA4P13667 645 aaKnown RBP9.47□□□□□ -0.89
SCRN1-208ENST00000438497 GCFC2P16383 781 aaKnown RBP9.47□□□□□ -0.89
SCRN1-208ENST00000438497 ATP2B1P20020 1258 aa9.47□□□□□ -0.89
SCRN1-208ENST00000438497 ALDH1A3P47895 512 aa9.47□□□□□ -0.89
SCRN1-208ENST00000438497 RARRES1P49788 294 aa9.47□□□□□ -0.89
SCRN1-208ENST00000438497 GALK1P51570 392 aa9.47□□□□□ -0.89
SCRN1-208ENST00000438497 DGKEP52429 567 aa9.47□□□□□ -0.89
SCRN1-208ENST00000438497 YARSP54577 528 aaKnown RBP9.47□□□□□ -0.89
SCRN1-208ENST00000438497 SIM1P81133 766 aaPredicted RBP9.47□□□□□ -0.89
SCRN1-208ENST00000438497 AMPD2Q01433 879 aa9.47□□□□□ -0.89
SCRN1-208ENST00000438497 SOX4Q06945 474 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms