RNA–Protein interactions for RNA: ENST00000438317.5

ERGIC3-207, Transcript of ERGIC and golgi 3, humanhuman

TSL 3

Gene ERGIC3, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-207ENST00000438317 TRIM43BA6NCK2 446 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 ASB14A6NK59 587 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 CLDN3O15551 220 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 MSCO60682 206 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 PHACTR2O75167 634 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 COMTP21964 271 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 TCF7P36402 384 aaPredicted RBP11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 RWDD2BP57060 319 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 MRPS25P82663 173 aaKnown RBP11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 POU5F1BQ06416 359 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 TFDP1Q14186 410 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 SNX17Q15036 470 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 GJC2Q5T442 439 aaPredicted RBP11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 MFSD14CQ5VZR4 134 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 NPLOC4Q8TAT6 608 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 ZNF564Q8TBZ8 553 aaPredicted RBP11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 ATP8B4Q8TF62 1192 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 PRPF31Q8WWY3 499 aaKnown RBP11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 CD101Q93033 1021 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 TRIM43Q96BQ3 446 aaPredicted RBP11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 MMP19Q99542 508 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 NUP85Q9BW27 656 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 TARS2Q9BW92 718 aaKnown RBP11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 DDX47Q9H0S4 455 aaKnown RBP11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 SMARCAD1Q9H4L7 1026 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 TOPORSQ9NS56 1045 aaPredicted RBP11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 CNOT8Q9UFF9 292 aaKnown RBP11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 PARP2Q9UGN5 583 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 TRPC6Q9Y210 931 aa11.78□□□□□ -0.52
ERGIC3-207ENST00000438317 TMEM265A0A087WTH1 108 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 NOP56O00567 594 aaKnown RBP11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 SPOPO43791 374 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 HBP1O60381 514 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 SORBS3O60504 671 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 TOM1L1O75674 476 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 CYP1A1P04798 512 aaPredicted RBP11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 IVLP07476 585 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 HOXC6P09630 235 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 FAM153BP0C7A2 387 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 UNGP13051 313 aaPredicted RBP11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 ITGA4P13612 1032 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 CTNNA1P35221 906 aaKnown RBP11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 PIK3CAP42336 1068 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 ACOT2P49753 483 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 GYS2P54840 703 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 NLRP11P59045 1033 aaKnown RBP11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 BIRC3Q13489 604 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 CUL2Q13617 745 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 CAPSQ13938 189 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 GRIN2CQ14957 1233 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 FAM153CQ494X1 144 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 EMC10Q5UCC4 262 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 CDCA2Q69YH5 1023 aaPredicted RBP11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 BRSK2Q8IWQ3 736 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 DHX37Q8IY37 1157 aaKnown RBP11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 MCOLN2Q8IZK6 566 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 TSEN2Q8NCE0 465 aaKnown RBP11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 GLG1Q92896 1179 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 FAXDC2Q96IV6 333 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 ZIM3Q96PE6 472 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 GPR20Q99678 358 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 ERP44Q9BS26 406 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 IMPG2Q9BZV3 1241 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 MRPL47Q9HD33 250 aaKnown RBP11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 PCYOX1Q9UHG3 505 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 AMACRQ9UHK6 382 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 FAM153AQ9UHL3 310 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 FEZ2Q9UHY8 353 aaPredicted RBP11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 KAT6AQ92794 2004 aa11.77□□□□□ -0.53
ERGIC3-207ENST00000438317 MCM3APO60318 1980 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 GOLGA6L10A6NI86 522 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 SLC15A5A6NIM6 579 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 TMEM110-MUSTN1A8MSY1 372 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 OGTO15294 1046 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 PHF2O75151 1096 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 VNN1O95497 513 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 CLTAP09496 248 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 CYBAP13498 195 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 ITGB8P26012 769 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 NSFP46459 744 aaKnown RBP11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 GUCY2FP51841 1108 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 DR1Q01658 176 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 LAMTOR4Q0VGL1 99 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 PTP4A2Q12974 167 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 TTLL4Q14679 1199 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 MAPK6Q16659 721 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 CYP1B1Q16678 543 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 LY6KQ17RY6 165 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 DUOXA2Q1HG44 320 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 SGSM1Q2NKQ1 1148 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 TRIM60Q495X7 471 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 ZNF484Q5JVG2 852 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 DCAF12L1Q5VU92 463 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 TDRD10Q5VZ19 366 aaKnown RBP11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 DUPD1Q68J44 220 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 RUFY4Q6ZNE9 571 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 CROCCP2Q86T23 111 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 WDR49Q8IV35 697 aa11.76□□□□□ -0.53
ERGIC3-207ENST00000438317 ABRAQ8N0Z2 381 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms