RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 GINS2Q9Y248 185 aa16.41■□□□□ 0.22
SGCE-205ENST00000437425 ANK1P16157 1881 aa16.41■□□□□ 0.22
SGCE-205ENST00000437425 KCNK3O14649 394 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 THAP12O43422 761 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 ATP8B1O43520 1251 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 NCK2O43639 380 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 CABYRO75952 493 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 NPTXRO95502 500 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 ASPAP45381 313 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 RBM10P98175 930 aaKnown RBP16.4■□□□□ 0.22
SGCE-205ENST00000437425 C1QBPQ07021 282 aaKnown RBP16.4■□□□□ 0.22
SGCE-205ENST00000437425 MYO1EQ12965 1108 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 WDR93Q6P2C0 686 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 FBXO38Q6PIJ6 1188 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 TMCO3Q6UWJ1 677 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 PHF13Q86YI8 300 aaPredicted RBP16.4■□□□□ 0.22
SGCE-205ENST00000437425 TMEM192Q8IY95 271 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 MCOLN2Q8IZK6 566 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 HNRNPLLQ8WVV9 542 aaKnown RBP16.4■□□□□ 0.22
SGCE-205ENST00000437425 ZNF606Q8WXB4 792 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 PARD6BQ9BYG5 372 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 CELF4Q9BZC1 486 aaKnown RBP16.4■□□□□ 0.22
SGCE-205ENST00000437425 ARHGAP39Q9C0H5 1083 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 DNAI2Q9GZS0 605 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 CARD9Q9H257 536 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 XPNPEP3Q9NQH7 507 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 DPP3Q9NY33 737 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 SIX4Q9UIU6 781 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 TTC7AQ9ULT0 858 aaPredicted RBP16.4■□□□□ 0.22
SGCE-205ENST00000437425 PCDHGC3Q9UN70 934 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 SCINQ9Y6U3 715 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 ITGB3P05106 788 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 ATF7P17544 494 aaPredicted RBP16.4■□□□□ 0.22
SGCE-205ENST00000437425 CACNB2Q08289 660 aaPredicted RBP16.4■□□□□ 0.22
SGCE-205ENST00000437425 PPP2R5EQ16537 467 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 WDR72Q3MJ13 1102 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 HACE1Q8IYU2 909 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 TMEM35BQ8NCS4 154 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 BEST2Q8NFU1 509 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 ZNF564Q8TBZ8 553 aaPredicted RBP16.4■□□□□ 0.22
SGCE-205ENST00000437425 KIF12Q96FN5 646 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 FAM84AQ96KN4 292 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 SNX27Q96L92 541 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 WNT8AQ9H1J5 351 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 ACP6Q9NPH0 428 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 CNOT8Q9UFF9 292 aaKnown RBP16.4■□□□□ 0.22
SGCE-205ENST00000437425 SRRDQ9UH36 339 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 KIAA1257Q9ULG3 409 aa16.4■□□□□ 0.22
SGCE-205ENST00000437425 UMODL1Q5DID0 1318 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 ADAMTS4O75173 837 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 CD4P01730 458 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 HMGCRP04035 888 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 CALB1P05937 261 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 ZSCAN20P17040 1043 aaPredicted RBP16.39■□□□□ 0.21
SGCE-205ENST00000437425 SLC1A1P43005 524 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 NOMO3P69849 1222 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 MRPS6P82932 125 aaKnown RBP16.39■□□□□ 0.21
SGCE-205ENST00000437425 PTPN11Q06124 597 aaPredicted RBP16.39■□□□□ 0.21
SGCE-205ENST00000437425 TMEM62Q0P6H9 643 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 RASGEF1CQ8N431 466 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 LRRC52Q8N7C0 313 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 KLHDC9Q8NEP7 349 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 CXorf38Q8TB03 319 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 PXYLP1Q8TE99 480 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 HPDLQ96IR7 371 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 NUP85Q9BW27 656 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 PLVAPQ9BX97 442 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 ANKZF1Q9H8Y5 726 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 ARFGAP3Q9NP61 516 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 CHST12Q9NRB3 414 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 CNTN3Q9P232 1028 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 COG5Q9UP83 839 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 PIN4Q9Y237 131 aaKnown RBP16.39■□□□□ 0.21
SGCE-205ENST00000437425 TRPV2Q9Y5S1 764 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 ALG6Q9Y672 507 aa16.39■□□□□ 0.21
SGCE-205ENST00000437425 RALGAPA2Q2PPJ7 1873 aa16.38■□□□□ 0.21
SGCE-205ENST00000437425 CCDC66A2RUB6 948 aa16.38■□□□□ 0.21
SGCE-205ENST00000437425 CCDC188H7C350 402 aa16.38■□□□□ 0.21
SGCE-205ENST00000437425 PGRMC1O00264 195 aaKnown RBP16.38■□□□□ 0.21
SGCE-205ENST00000437425 PDE2AO00408 941 aaPredicted RBP16.38■□□□□ 0.21
SGCE-205ENST00000437425 AOC2O75106 756 aa16.38■□□□□ 0.21
SGCE-205ENST00000437425 CXCR5P32302 372 aa16.38■□□□□ 0.21
SGCE-205ENST00000437425 CDH5P33151 784 aaPredicted RBP16.38■□□□□ 0.21
SGCE-205ENST00000437425 PRMT2P55345 433 aa16.38■□□□□ 0.21
SGCE-205ENST00000437425 TNNC1P63316 161 aa16.38■□□□□ 0.21
SGCE-205ENST00000437425 TAP1Q03518 808 aa16.38■□□□□ 0.21
SGCE-205ENST00000437425 HIC1Q14526 733 aa16.38■□□□□ 0.21
SGCE-205ENST00000437425 NBPF20Q3BBV1 942 aa16.38■□□□□ 0.21
SGCE-205ENST00000437425 MAP9Q49MG5 647 aa16.38■□□□□ 0.21
SGCE-205ENST00000437425 MON1BQ7L1V2 547 aa16.38■□□□□ 0.21
SGCE-205ENST00000437425 DNAAF5Q86Y56 855 aa16.38■□□□□ 0.21
SGCE-205ENST00000437425 NOA1Q8NC60 698 aaKnown RBP16.38■□□□□ 0.21
SGCE-205ENST00000437425 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.38■□□□□ 0.21
SGCE-205ENST00000437425 LHX5Q9H2C1 402 aa16.38■□□□□ 0.21
SGCE-205ENST00000437425 CDHR5Q9HBB8 845 aa16.38■□□□□ 0.21
SGCE-205ENST00000437425 NXF1Q9UBU9 619 aaKnown RBP16.38■□□□□ 0.21
SGCE-205ENST00000437425 UBQLN1Q9UMX0 589 aaKnown RBP16.38■□□□□ 0.21
SGCE-205ENST00000437425 AGAP1Q9UPQ3 857 aa16.38■□□□□ 0.21
SGCE-205ENST00000437425 SCN10AQ9Y5Y9 1956 aa16.38■□□□□ 0.21
SGCE-205ENST00000437425 TLR3O15455 904 aaKnown RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms