RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 ADSSL1Q8N142 457 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 CLMNQ96JQ2 1002 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 SUPT3HO75486 399 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 CELF2O95319 508 aaKnown RBP16.64■□□□□ 0.25
PTPN13-204ENST00000436978 CTSHP09668 335 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 GOLGA7BQ2TAP0 167 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 FAM200BP0CF97 657 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 MYBP10242 640 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 CACNB2Q08289 660 aaPredicted RBP16.64■□□□□ 0.25
PTPN13-204ENST00000436978 SFSWAPQ12872 951 aaKnown RBP16.64■□□□□ 0.25
PTPN13-204ENST00000436978 TDRD10Q5VZ19 366 aaKnown RBP16.64■□□□□ 0.25
PTPN13-204ENST00000436978 SPATA16Q9BXB7 569 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 GOLGA8TH3BQL2 631 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 R3HDM1Q15032 1099 aaKnown RBP16.64■□□□□ 0.25
PTPN13-204ENST00000436978 IL31Q6EBC2 164 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 CYTH2Q99418 400 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 ITIH2P19823 946 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 LCA5Q86VQ0 697 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 ICA1LQ8NDH6 482 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 JMJD4Q9H9V9 463 aa16.64■□□□□ 0.25
PTPN13-204ENST00000436978 CDV3Q9UKY7 258 aaKnown RBP16.64■□□□□ 0.25
PTPN13-204ENST00000436978 GPR182O15218 404 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 SYF2O95926 243 aaKnown RBP16.63■□□□□ 0.25
PTPN13-204ENST00000436978 NAB2Q15742 525 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 RARS2Q5T160 578 aaKnown RBP16.63■□□□□ 0.25
PTPN13-204ENST00000436978 LMBRD2Q68DH5 695 aaPredicted RBP16.63■□□□□ 0.25
PTPN13-204ENST00000436978 HIBCHQ6NVY1 386 aaPredicted RBP16.63■□□□□ 0.25
PTPN13-204ENST00000436978 POLD4Q9HCU8 107 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 CFAP73A6NFT4 308 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 ATP9BO43861 1147 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 KCNA2P16389 499 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 AKT1P31749 480 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 FAM47EQ6ZV65 393 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 NIF3L1Q9GZT8 377 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 WWP1Q9H0M0 922 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 KCNH7Q9NS40 1196 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 PAK5Q9P286 719 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 TEX33O43247 280 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 TNIP2Q8NFZ5 429 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 MROH8Q9H579 483 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 SNX12Q9UMY4 172 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 ANGPT2O15123 496 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 IL10P22301 178 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 MARCH10Q8NA82 808 aaPredicted RBP16.63■□□□□ 0.25
PTPN13-204ENST00000436978 RMDN2Q96LZ7 410 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 STOML1Q9UBI4 398 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 TBX20Q9UMR3 447 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 GPD1P21695 349 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 RGS4P49798 205 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 ZNF484Q5JVG2 852 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 MYCBPQ99417 103 aaPredicted RBP16.63■□□□□ 0.25
PTPN13-204ENST00000436978 GTF2H1P32780 548 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 UNC45AQ9H3U1 944 aa16.63■□□□□ 0.25
PTPN13-204ENST00000436978 OCM2P0CE71 109 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 OCMP0CE72 109 aaPredicted RBP16.62■□□□□ 0.25
PTPN13-204ENST00000436978 RGS9BPQ6ZS82 235 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 FRMD8P1Q9BZ68 369 aaPredicted RBP16.62■□□□□ 0.25
PTPN13-204ENST00000436978 HDAC6Q9UBN7 1215 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 DSEQ9UL01 958 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 HOXA2O43364 376 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 ATP1A1P05023 1023 aaKnown RBP16.62■□□□□ 0.25
PTPN13-204ENST00000436978 ALDH7A1P49419 539 aaKnown RBP16.62■□□□□ 0.25
PTPN13-204ENST00000436978 BYSLQ13895 437 aaKnown RBP16.62■□□□□ 0.25
PTPN13-204ENST00000436978 RASGRP2Q7LDG7 609 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 PSMC3IPQ9P2W1 217 aaPredicted RBP16.62■□□□□ 0.25
PTPN13-204ENST00000436978 SPATA31D1Q6ZQQ2 1576 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 SERPINB4P48594 390 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 PPP4CP60510 307 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 ARID5BQ14865 1188 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 ARHGAP26Q9UNA1 814 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 GCLCP48506 637 aaPredicted RBP16.62■□□□□ 0.25
PTPN13-204ENST00000436978 MMS22LQ6ZRQ5 1243 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 IFT172Q9UG01 1749 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 LRG1P02750 347 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 PDGFRBP09619 1106 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 OR1G1P47890 313 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 SLC30A5Q8TAD4 765 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 ADARB2Q9NS39 739 aaKnown RBP16.62■□□□□ 0.25
PTPN13-204ENST00000436978 PLA2G4FQ68DD2 849 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 UGT3A1Q6NUS8 523 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 SPATA4Q8NEY3 305 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 MYMKA6NI61 221 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 NPTXRO95502 500 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 HOXC6P09630 235 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 TAF6P49848 677 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 CENPCQ03188 943 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 RRM2BQ7LG56 351 aa16.62■□□□□ 0.25
PTPN13-204ENST00000436978 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.62■□□□□ 0.25
PTPN13-204ENST00000436978 TTC39BQ5VTQ0 682 aaPredicted RBP16.61■□□□□ 0.25
PTPN13-204ENST00000436978 GMCL1P1Q8NEA9 526 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 ZC3H7BQ9UGR2 993 aaKnown RBP16.61■□□□□ 0.25
PTPN13-204ENST00000436978 TMEM62Q0P6H9 643 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 LRIG3Q6UXM1 1119 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 RIBC1Q8N443 379 aaPredicted RBP16.61■□□□□ 0.25
PTPN13-204ENST00000436978 ELMO2Q96JJ3 720 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 SPATA17Q96L03 361 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 SRPK1Q96SB4 655 aaKnown RBP16.61■□□□□ 0.25
PTPN13-204ENST00000436978 COLEC11Q9BWP8 271 aa16.61■□□□□ 0.25
PTPN13-204ENST00000436978 ZBTB12Q9Y330 459 aaPredicted RBP16.61■□□□□ 0.25
PTPN13-204ENST00000436978 CFAP99D6REC4 459 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms