RNA–Protein interactions for RNA: ENST00000435928.1

CALD1-208, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-208ENST00000435928 DCLK2Q8N568 766 aa17.1■□□□□ 0.33
CALD1-208ENST00000435928 SMARCD2Q92925 531 aa17.1■□□□□ 0.33
CALD1-208ENST00000435928 IRF7Q92985 503 aa17.1■□□□□ 0.33
CALD1-208ENST00000435928 HAPLN2Q9GZV7 340 aa17.1■□□□□ 0.33
CALD1-208ENST00000435928 NCDNQ9UBB6 729 aa17.1■□□□□ 0.33
CALD1-208ENST00000435928 UBQLN1Q9UMX0 589 aaKnown RBP17.1■□□□□ 0.33
CALD1-208ENST00000435928 NDRG2Q9UN36 371 aaKnown RBP17.1■□□□□ 0.33
CALD1-208ENST00000435928 YIPF1Q9Y548 306 aa17.1■□□□□ 0.33
CALD1-208ENST00000435928 TCHHQ07283 1943 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 F5P12259 2224 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 NPHP3-ACAD11A0A0J9YXS1 232 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 TTC26A0AVF1 554 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 H3BQV1 296 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 MAN2B1O00754 1011 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 NRG2O14511 850 aaPredicted RBP17.09■□□□□ 0.33
CALD1-208ENST00000435928 XPOTO43592 962 aaKnown RBP17.09■□□□□ 0.33
CALD1-208ENST00000435928 PSMC3P17980 439 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 LRPAP1P30533 357 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 TNFSF9P41273 254 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 EPHA5P54756 1037 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 PLD1Q13393 1074 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 RABEP1Q15276 862 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 ARL6IP4Q66PJ3 421 aaKnown RBP17.09■□□□□ 0.33
CALD1-208ENST00000435928 VITQ6UXI7 678 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 HAUS6Q7Z4H7 955 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 USP37Q86T82 979 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 TMEM130Q8N3G9 435 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 BEST2Q8NFU1 509 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 DEPDC1BQ8WUY9 529 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 ZSWIM3Q96MP5 696 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 OXCT2Q9BYC2 517 aaPredicted RBP17.09■□□□□ 0.33
CALD1-208ENST00000435928 SLITRK6Q9H5Y7 841 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 PRMT8Q9NR22 394 aaPredicted RBP17.09■□□□□ 0.33
CALD1-208ENST00000435928 ZSCAN32Q9NX65 697 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 ODF2LQ9ULJ1 636 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 TIMM13Q9Y5L4 95 aaPredicted RBP17.09■□□□□ 0.33
CALD1-208ENST00000435928 GPR179Q6PRD1 2367 aa17.09■□□□□ 0.33
CALD1-208ENST00000435928 K7ENM7 598 aa17.08■□□□□ 0.32
CALD1-208ENST00000435928 MOSPD3O75425 235 aa17.08■□□□□ 0.32
CALD1-208ENST00000435928 OAZ2O95190 189 aa17.08■□□□□ 0.32
CALD1-208ENST00000435928 OR4Q2P0C623 313 aa17.08■□□□□ 0.32
CALD1-208ENST00000435928 GJA1P17302 382 aa17.08■□□□□ 0.32
CALD1-208ENST00000435928 CYP3A5P20815 502 aa17.08■□□□□ 0.32
CALD1-208ENST00000435928 GDI1P31150 447 aa17.08■□□□□ 0.32
CALD1-208ENST00000435928 AARSP49588 968 aaKnown RBP eCLIP17.08■□□□□ 0.32
CALD1-208ENST00000435928 MTAPQ13126 283 aa17.08■□□□□ 0.32
CALD1-208ENST00000435928 TEAD2Q15562 447 aa17.08■□□□□ 0.32
CALD1-208ENST00000435928 KYAT1Q16773 422 aa17.08■□□□□ 0.32
CALD1-208ENST00000435928 C8orf34Q49A92 452 aa17.08■□□□□ 0.32
CALD1-208ENST00000435928 DSTYKQ6XUX3 929 aa17.08■□□□□ 0.32
CALD1-208ENST00000435928 DGLUCYQ7Z3D6 616 aa17.08■□□□□ 0.32
CALD1-208ENST00000435928 ZBTB44Q8NCP5 570 aa17.08■□□□□ 0.32
CALD1-208ENST00000435928 ZSCAN18Q8TBC5 510 aaPredicted RBP17.08■□□□□ 0.32
CALD1-208ENST00000435928 PGLYRP2Q96PD5 576 aa17.08■□□□□ 0.32
CALD1-208ENST00000435928 REEP2Q9BRK0 252 aa17.08■□□□□ 0.32
CALD1-208ENST00000435928 ZNF334Q9HCZ1 680 aaPredicted RBP17.08■□□□□ 0.32
CALD1-208ENST00000435928 OR6C75A6NL08 312 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 SHISA7A6NL88 538 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 LACTBL1A8MY62 500 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 OGTO15294 1046 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 SCP2P22307 547 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 GJB2P29033 226 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 VIPR2P41587 438 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 FZD5Q13467 585 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 PUM1Q14671 1186 aaKnown RBP eCLIP17.07■□□□□ 0.32
CALD1-208ENST00000435928 ZBTB6Q15916 424 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 ENOX2Q16206 610 aaKnown RBP17.07■□□□□ 0.32
CALD1-208ENST00000435928 ARSHQ5FYA8 562 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 TSSK4Q6SA08 328 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 GPBP1Q86WP2 473 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 MAP4K3Q8IVH8 894 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 KCNN1Q92952 543 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 SECISBP2LQ93073 1101 aaKnown RBP17.07■□□□□ 0.32
CALD1-208ENST00000435928 CALML4Q96GE6 196 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 AK8Q96MA6 479 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 GPR88Q9GZN0 384 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 RPF1Q9H9Y2 349 aaKnown RBP17.07■□□□□ 0.32
CALD1-208ENST00000435928 TRPV4Q9HBA0 871 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 TRPV5Q9NQA5 729 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 SMG5Q9UPR3 1016 aaKnown RBP17.07■□□□□ 0.32
CALD1-208ENST00000435928 PIAS3Q9Y6X2 628 aa17.07■□□□□ 0.32
CALD1-208ENST00000435928 ZNF263O14978 683 aa17.06■□□□□ 0.32
CALD1-208ENST00000435928 SLC26A4O43511 780 aa17.06■□□□□ 0.32
CALD1-208ENST00000435928 FAM13AO94988 1023 aa17.06■□□□□ 0.32
CALD1-208ENST00000435928 GUCY2FP51841 1108 aa17.06■□□□□ 0.32
CALD1-208ENST00000435928 EPHB3P54753 998 aa17.06■□□□□ 0.32
CALD1-208ENST00000435928 GPR17Q13304 367 aa17.06■□□□□ 0.32
CALD1-208ENST00000435928 DHX8Q14562 1220 aaKnown RBP17.06■□□□□ 0.32
CALD1-208ENST00000435928 PPP2R5DQ14738 602 aa17.06■□□□□ 0.32
CALD1-208ENST00000435928 OVOS1Q6IE37 1185 aa17.06■□□□□ 0.32
CALD1-208ENST00000435928 MYCT1Q8N699 235 aa17.06■□□□□ 0.32
CALD1-208ENST00000435928 SHKBP1Q8TBC3 707 aa17.06■□□□□ 0.32
CALD1-208ENST00000435928 FAM3CQ92520 227 aa17.06■□□□□ 0.32
CALD1-208ENST00000435928 NELL1Q92832 810 aa17.06■□□□□ 0.32
CALD1-208ENST00000435928 TMX3Q96JJ7 454 aa17.06■□□□□ 0.32
CALD1-208ENST00000435928 TSPAN18Q96SJ8 248 aa17.06■□□□□ 0.32
CALD1-208ENST00000435928 IER2Q9BTL4 223 aa17.06■□□□□ 0.32
CALD1-208ENST00000435928 MSTO1Q9BUK6 570 aa17.06■□□□□ 0.32
CALD1-208ENST00000435928 FAM126AQ9BYI3 521 aaPredicted RBP17.06■□□□□ 0.32
CALD1-208ENST00000435928 EPC1Q9H2F5 836 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms