RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 CYP4X1Q8N118 509 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 GLIS1Q8NBF1 620 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 ZNF483Q8TF39 744 aaPredicted RBP11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 IFT74Q96LB3 600 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 WRNIP1Q96S55 665 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 TAOK3Q9H2K8 898 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 AVENQ9NQS1 362 aaPredicted RBP11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 HAUS2Q9NVX0 235 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 FBXO40Q9UH90 709 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 LRRIQ4A6NIV6 560 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 RASSF9O75901 435 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 FDX1P10109 184 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 GBP1P32455 592 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 POLGP54098 1239 aaPredicted RBP11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 ZNF280AP59817 542 aaPredicted RBP11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 RPL7AP62424 266 aaKnown RBP11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 NOMO3P69849 1222 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 ADCY1Q08828 1119 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 DRP2Q13474 957 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 MAMLD1Q13495 774 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 TNFAIP1Q13829 316 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 MPP2Q14168 576 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 USP37Q86T82 979 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 ELAC2Q9BQ52 826 aaKnown RBP11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 WHRNQ9P202 907 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 NEU2Q9Y3R4 380 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 MYH9P35579 1960 aaKnown RBP11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 PI4K2BG5E9Z4 385 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 PROSCO94903 275 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 RXRBP28702 533 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 SCTRP47872 440 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 CUL2Q13617 745 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 ENOSF1Q7L5Y1 443 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 ZNF280CQ8ND82 737 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 JDP2Q8WYK2 163 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 GGT7Q9UJ14 662 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 PCDHB4Q9Y5E5 795 aa11.06□□□□□ -0.64
CLSTN1-203ENST00000435891 NFKBIEO00221 500 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 GH1P01241 217 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 GNA15P30679 374 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 RTP1P59025 263 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 CNTN2Q02246 1040 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 PTK6Q13882 451 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 WDR44Q5JSH3 913 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 VSTM1Q6UX27 236 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 ARHGEF2Q92974 986 aaKnown RBP11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 SNF8Q96H20 258 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 RBAKQ9NYW8 714 aaPredicted RBP11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 ADAM22Q9P0K1 906 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 TBK1Q9UHD2 729 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 RGPD3A6NKT7 1758 aaPredicted RBP11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 SPATA31C2B4DYI2 1134 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 MAFGO15525 162 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 ZC3H11AO75152 810 aaKnown RBP eCLIP11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 VIMP08670 466 aaKnown RBP11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 KRT10P13645 584 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 ADCY8P40145 1251 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 GMPSP49915 693 aaPredicted RBP11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 PTP4A2Q12974 167 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 THEMIS2Q5TEJ8 643 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 CAPRIN2Q6IMN6 1127 aaKnown RBP11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 MFSD5Q6N075 450 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 RGPD4Q7Z3J3 1758 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 PIGWQ7Z7B1 504 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 SCYL3Q8IZE3 742 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 ACSF2Q96CM8 615 aaPredicted RBP11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 C9orf72Q96LT7 481 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 CD2APQ9Y5K6 639 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 CST3P01034 146 aaPredicted RBP11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 SUPT20HL2P0C7V6 817 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 ITIH2P19823 946 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 TNFSF9P41273 254 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 GNPTABQ3T906 1256 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 SUPT20HL1Q3ZLR7 823 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 XKR3Q5GH77 459 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 XRRA1Q6P2D8 792 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 TRMT10CQ7L0Y3 403 aaKnown RBP11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 DEFB132Q7Z7B7 95 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 ABRAQ8N0Z2 381 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 RUNDC3BQ96NL0 473 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 NINJ2Q9NZG7 142 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 ADAMTS5Q9UNA0 930 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 GJA3Q9Y6H8 435 aa11.05□□□□□ -0.64
CLSTN1-203ENST00000435891 TMEM120BA0PK00 339 aa11.04□□□□□ -0.64
CLSTN1-203ENST00000435891 TTC4O95801 387 aa11.04□□□□□ -0.64
CLSTN1-203ENST00000435891 NOP14P78316 857 aaKnown RBP11.04□□□□□ -0.64
CLSTN1-203ENST00000435891 TXNRD3NBQ6F5E7 133 aa11.04□□□□□ -0.64
CLSTN1-203ENST00000435891 RBBP8NLQ8NC74 664 aaPredicted RBP11.04□□□□□ -0.64
CLSTN1-203ENST00000435891 CCDC197Q8NCU1 140 aa11.04□□□□□ -0.64
CLSTN1-203ENST00000435891 PLVAPQ9BX97 442 aa11.04□□□□□ -0.64
CLSTN1-203ENST00000435891 OSBPL8Q9BZF1 889 aa11.04□□□□□ -0.64
CLSTN1-203ENST00000435891 STYXL1Q9Y6J8 313 aa11.04□□□□□ -0.64
CLSTN1-203ENST00000435891 CNTNAP2Q9UHC6 1331 aa11.04□□□□□ -0.64
CLSTN1-203ENST00000435891 K7ERI5 159 aa11.04□□□□□ -0.64
CLSTN1-203ENST00000435891 SNUPNO95149 360 aaKnown RBP11.04□□□□□ -0.64
CLSTN1-203ENST00000435891 CLTAP09496 248 aa11.04□□□□□ -0.64
CLSTN1-203ENST00000435891 ZSCAN5DPP0CG00 497 aa11.04□□□□□ -0.64
CLSTN1-203ENST00000435891 STRN3Q13033 797 aa11.04□□□□□ -0.64
CLSTN1-203ENST00000435891 ZNF394Q53GI3 561 aa11.04□□□□□ -0.64
CLSTN1-203ENST00000435891 KAZNQ674X7 775 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms