RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 CTXN3Q4LDR2 81 aa17.58■□□□□ 0.4
SMPD4-207ENST00000435455 RSPO2Q6UXX9 243 aaPredicted RBP17.58■□□□□ 0.4
SMPD4-207ENST00000435455 RTL10Q7L3V2 364 aa17.58■□□□□ 0.4
SMPD4-207ENST00000435455 USP37Q86T82 979 aa17.58■□□□□ 0.4
SMPD4-207ENST00000435455 C12orf56Q8IXR9 622 aa17.58■□□□□ 0.4
SMPD4-207ENST00000435455 FMR1NBQ8N0W7 255 aaPredicted RBP17.58■□□□□ 0.4
SMPD4-207ENST00000435455 XXYLT1Q8NBI6 393 aa17.58■□□□□ 0.4
SMPD4-207ENST00000435455 OXCT2Q9BYC2 517 aaPredicted RBP17.58■□□□□ 0.4
SMPD4-207ENST00000435455 PDE11AQ9HCR9 933 aa17.58■□□□□ 0.4
SMPD4-207ENST00000435455 CDH22Q9UJ99 828 aa17.58■□□□□ 0.4
SMPD4-207ENST00000435455 TULP1O00294 542 aaPredicted RBP17.57■□□□□ 0.4
SMPD4-207ENST00000435455 CLIC2O15247 247 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 RFPL2O75678 378 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 RHOBTB3O94955 611 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 HNRNPA1P09651 372 aaKnown RBP eCLIP17.57■□□□□ 0.4
SMPD4-207ENST00000435455 PRR29P0C7W0 189 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 ODC1P11926 461 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 TYMPP19971 482 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 PNPLA4P41247 253 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 TAF6P49848 677 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 WNT7BP56706 349 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 YWHAHQ04917 246 aaPredicted RBP17.57■□□□□ 0.4
SMPD4-207ENST00000435455 FAM160A1Q05DH4 1040 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 KCNB1Q14721 858 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 UVSSAQ2YD98 709 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 CCDC149Q6ZUS6 474 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 CBWD2Q8IUF1 395 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 KIAA0895Q8NCT3 520 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 SMG7Q92540 1137 aaKnown RBP17.57■□□□□ 0.4
SMPD4-207ENST00000435455 SENP8Q96LD8 212 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 ZNF560Q96MR9 790 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 PRKD2Q9BZL6 878 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 CHMP5Q9NZZ3 219 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 FBXL5Q9UKA1 691 aa17.57■□□□□ 0.4
SMPD4-207ENST00000435455 OAZ2O95190 189 aa17.56■□□□□ 0.4
SMPD4-207ENST00000435455 TMEM191BP0C7N4 346 aa17.56■□□□□ 0.4
SMPD4-207ENST00000435455 HOXA9P31269 272 aa17.56■□□□□ 0.4
SMPD4-207ENST00000435455 ROR1Q01973 937 aa17.56■□□□□ 0.4
SMPD4-207ENST00000435455 SNRNP35Q16560 246 aaKnown RBP17.56■□□□□ 0.4
SMPD4-207ENST00000435455 SV2CQ496J9 727 aa17.56■□□□□ 0.4
SMPD4-207ENST00000435455 PPM1LQ5SGD2 360 aa17.56■□□□□ 0.4
SMPD4-207ENST00000435455 TPGS2Q68CL5 300 aa17.56■□□□□ 0.4
SMPD4-207ENST00000435455 RNF135Q8IUD6 432 aa17.56■□□□□ 0.4
SMPD4-207ENST00000435455 ENGASEQ8NFI3 743 aa17.56■□□□□ 0.4
SMPD4-207ENST00000435455 ZNF461Q8TAF7 563 aa17.56■□□□□ 0.4
SMPD4-207ENST00000435455 ZNF707Q96C28 371 aaPredicted RBP17.56■□□□□ 0.4
SMPD4-207ENST00000435455 ANKRD36BP1Q96IX9 119 aa17.56■□□□□ 0.4
SMPD4-207ENST00000435455 PIDD1Q9HB75 910 aa17.56■□□□□ 0.4
SMPD4-207ENST00000435455 TSHZ2Q9NRE2 1034 aa17.56■□□□□ 0.4
SMPD4-207ENST00000435455 ITGA11Q9UKX5 1188 aa17.56■□□□□ 0.4
SMPD4-207ENST00000435455 DSEQ9UL01 958 aa17.56■□□□□ 0.4
SMPD4-207ENST00000435455 USTQ9Y2C2 406 aa17.56■□□□□ 0.4
SMPD4-207ENST00000435455 OR6C75A6NL08 312 aa17.55■□□□□ 0.4
SMPD4-207ENST00000435455 SPTLC1O15269 473 aa17.55■□□□□ 0.4
SMPD4-207ENST00000435455 XYLBO75191 536 aa17.55■□□□□ 0.4
SMPD4-207ENST00000435455 ABLIM3O94929 683 aa17.55■□□□□ 0.4
SMPD4-207ENST00000435455 TNNC2P02585 160 aa17.55■□□□□ 0.4
SMPD4-207ENST00000435455 C8AP07357 584 aa17.55■□□□□ 0.4
SMPD4-207ENST00000435455 ALADP13716 330 aa17.55■□□□□ 0.4
SMPD4-207ENST00000435455 ELF1P32519 619 aa17.55■□□□□ 0.4
SMPD4-207ENST00000435455 SNW1Q13573 536 aaKnown RBP17.55■□□□□ 0.4
SMPD4-207ENST00000435455 OVOS1Q6IE37 1185 aa17.55■□□□□ 0.4
SMPD4-207ENST00000435455 LRRC52Q8N7C0 313 aa17.55■□□□□ 0.4
SMPD4-207ENST00000435455 C1orf127Q8N9H9 656 aa17.55■□□□□ 0.4
SMPD4-207ENST00000435455 SLC7A14Q8TBB6 771 aa17.55■□□□□ 0.4
SMPD4-207ENST00000435455 ACSF2Q96CM8 615 aaPredicted RBP17.55■□□□□ 0.4
SMPD4-207ENST00000435455 WDR6Q9NNW5 1121 aaKnown RBP17.55■□□□□ 0.4
SMPD4-207ENST00000435455 INTS13Q9NVM9 706 aa17.55■□□□□ 0.4
SMPD4-207ENST00000435455 HOOK1Q9UJC3 728 aaKnown RBP17.55■□□□□ 0.4
SMPD4-207ENST00000435455 MAFFQ9ULX9 164 aa17.55■□□□□ 0.4
SMPD4-207ENST00000435455 AGAP1Q9UPQ3 857 aa17.55■□□□□ 0.4
SMPD4-207ENST00000435455 R3HCC1Q9Y3T6 440 aaKnown RBP17.55■□□□□ 0.4
SMPD4-207ENST00000435455 TIMM13Q9Y5L4 95 aaPredicted RBP17.55■□□□□ 0.4
SMPD4-207ENST00000435455 TSC2P49815 1807 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 CLUHO75153 1309 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 WDR27A2RRH5 827 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 PI4K2BG5E9Z4 385 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 PDXKO00764 312 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 DCXO43602 365 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 EXOC3O60645 756 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 PRPF40AO75400 957 aaKnown RBP17.54■□□□□ 0.4
SMPD4-207ENST00000435455 ITGB3P05106 788 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 CYP11A1P05108 521 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 POU2F2P09086 479 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 CPB1P15086 417 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 ATF2P15336 505 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 POLR2BP30876 1174 aaKnown RBP17.54■□□□□ 0.4
SMPD4-207ENST00000435455 ARPP19P56211 112 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 RBP5P82980 135 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 CYP24A1Q07973 514 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 PSMD6Q15008 389 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 DUOXA2Q1HG44 320 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 OTOP3Q7RTS5 596 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 METTL23Q86XA0 190 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 WDR49Q8IV35 697 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 SLC9A9Q8IVB4 645 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 PLCD3Q8N3E9 789 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 TDRD5Q8NAT2 981 aaKnown RBP17.54■□□□□ 0.4
SMPD4-207ENST00000435455 RDH13Q8NBN7 331 aa17.54■□□□□ 0.4
SMPD4-207ENST00000435455 TMEM174Q8WUU8 243 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms