RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 ARL2P36404 184 aa17.34■□□□□ 0.37
NUP50-209ENST00000432340 MAPK8P45983 427 aa17.34■□□□□ 0.37
NUP50-209ENST00000432340 ALDH1A3P47895 512 aa17.34■□□□□ 0.37
NUP50-209ENST00000432340 DHPSP49366 369 aaPredicted RBP17.34■□□□□ 0.37
NUP50-209ENST00000432340 SEMA3BQ13214 749 aa17.34■□□□□ 0.37
NUP50-209ENST00000432340 FAM187BQ17R55 369 aa17.34■□□□□ 0.37
NUP50-209ENST00000432340 CREB3L3Q68CJ9 461 aa17.34■□□□□ 0.37
NUP50-209ENST00000432340 FSTL4Q6MZW2 842 aa17.34■□□□□ 0.37
NUP50-209ENST00000432340 DHX32Q7L7V1 743 aaKnown RBP17.34■□□□□ 0.37
NUP50-209ENST00000432340 PIP4P1Q86T03 277 aa17.34■□□□□ 0.37
NUP50-209ENST00000432340 TSTD1Q8NFU3 115 aa17.34■□□□□ 0.37
NUP50-209ENST00000432340 ASAP3Q8TDY4 903 aa17.34■□□□□ 0.37
NUP50-209ENST00000432340 XPNPEP1Q9NQW7 623 aa17.34■□□□□ 0.37
NUP50-209ENST00000432340 TOPORSQ9NS56 1045 aaPredicted RBP17.34■□□□□ 0.37
NUP50-209ENST00000432340 NOTCH4Q99466 2003 aa17.33■□□□□ 0.37
NUP50-209ENST00000432340 LRRIQ4A6NIV6 560 aa17.33■□□□□ 0.36
NUP50-209ENST00000432340 EDIL3O43854 480 aa17.33■□□□□ 0.36
NUP50-209ENST00000432340 GSPT1P15170 499 aaKnown RBP17.33■□□□□ 0.36
NUP50-209ENST00000432340 GLRA2P23416 452 aa17.33■□□□□ 0.36
NUP50-209ENST00000432340 BRCC3P46736 316 aa17.33■□□□□ 0.36
NUP50-209ENST00000432340 PRPF4BQ13523 1007 aaKnown RBP17.33■□□□□ 0.36
NUP50-209ENST00000432340 DMC1Q14565 340 aa17.33■□□□□ 0.36
NUP50-209ENST00000432340 MAPK6Q16659 721 aa17.33■□□□□ 0.36
NUP50-209ENST00000432340 ITIH5Q86UX2 942 aa17.33■□□□□ 0.36
NUP50-209ENST00000432340 BBC3Q96PG8 261 aaPredicted RBP17.33■□□□□ 0.36
NUP50-209ENST00000432340 PPP1R10Q96QC0 940 aaKnown RBP17.33■□□□□ 0.36
NUP50-209ENST00000432340 GCNAQ96QF7 691 aa17.33■□□□□ 0.36
NUP50-209ENST00000432340 ATXN3LQ9H3M9 355 aa17.33■□□□□ 0.36
NUP50-209ENST00000432340 YIPF1Q9Y548 306 aa17.33■□□□□ 0.36
NUP50-209ENST00000432340 SPAG17Q6Q759 2223 aa17.32■□□□□ 0.36
NUP50-209ENST00000432340 PATE3B3GLJ2 98 aa17.32■□□□□ 0.36
NUP50-209ENST00000432340 I3L4J1 428 aa17.32■□□□□ 0.36
NUP50-209ENST00000432340 TNFRSF10BO14763 440 aa17.32■□□□□ 0.36
NUP50-209ENST00000432340 ADAMTS3O15072 1205 aa17.32■□□□□ 0.36
NUP50-209ENST00000432340 OPHN1O60890 802 aa17.32■□□□□ 0.36
NUP50-209ENST00000432340 ADD1P35611 737 aaKnown RBP17.32■□□□□ 0.36
NUP50-209ENST00000432340 YARSP54577 528 aaKnown RBP17.32■□□□□ 0.36
NUP50-209ENST00000432340 TNK2Q07912 1038 aa17.32■□□□□ 0.36
NUP50-209ENST00000432340 RUNX3Q13761 415 aa17.32■□□□□ 0.36
NUP50-209ENST00000432340 MRPL58Q14197 206 aaKnown RBP17.32■□□□□ 0.36
NUP50-209ENST00000432340 LPCAT2Q7L5N7 544 aa17.32■□□□□ 0.36
NUP50-209ENST00000432340 RABEPKQ7Z6M1 372 aa17.32■□□□□ 0.36
NUP50-209ENST00000432340 SYT12Q8IV01 421 aa17.32■□□□□ 0.36
NUP50-209ENST00000432340 SPACA7Q96KW9 195 aa17.32■□□□□ 0.36
NUP50-209ENST00000432340 NAP1L4Q99733 375 aaKnown RBP17.32■□□□□ 0.36
NUP50-209ENST00000432340 RNF26Q9BY78 433 aaPredicted RBP17.32■□□□□ 0.36
NUP50-209ENST00000432340 FZD8Q9H461 694 aa17.32■□□□□ 0.36
NUP50-209ENST00000432340 PDZD7Q9H5P4 517 aa17.32■□□□□ 0.36
NUP50-209ENST00000432340 ANKEF1Q9NU02 776 aa17.32■□□□□ 0.36
NUP50-209ENST00000432340 WRAP73Q9P2S5 460 aaPredicted RBP17.32■□□□□ 0.36
NUP50-209ENST00000432340 VAV3Q9UKW4 847 aa17.32■□□□□ 0.36
NUP50-209ENST00000432340 GDAQ9Y2T3 454 aa17.32■□□□□ 0.36
NUP50-209ENST00000432340 TDRD15B5MCY1 1934 aaKnown RBP17.31■□□□□ 0.36
NUP50-209ENST00000432340 TICRRQ7Z2Z1 1910 aa17.31■□□□□ 0.36
NUP50-209ENST00000432340 CAPN8A6NHC0 703 aa17.31■□□□□ 0.36
NUP50-209ENST00000432340 HMGB1P09429 215 aaKnown RBP17.31■□□□□ 0.36
NUP50-209ENST00000432340 GCFC2P16383 781 aaKnown RBP17.31■□□□□ 0.36
NUP50-209ENST00000432340 ENGP17813 658 aa17.31■□□□□ 0.36
NUP50-209ENST00000432340 MARCKSP29966 332 aaPredicted RBP17.31■□□□□ 0.36
NUP50-209ENST00000432340 RPL9P32969 192 aaKnown RBP17.31■□□□□ 0.36
NUP50-209ENST00000432340 BYSLQ13895 437 aaKnown RBP17.31■□□□□ 0.36
NUP50-209ENST00000432340 SPDYCQ5MJ68 293 aa17.31■□□□□ 0.36
NUP50-209ENST00000432340 GPR158Q5T848 1215 aa17.31■□□□□ 0.36
NUP50-209ENST00000432340 GALNT17Q6IS24 598 aa17.31■□□□□ 0.36
NUP50-209ENST00000432340 CC2D1AQ6P1N0 951 aaPredicted RBP17.31■□□□□ 0.36
NUP50-209ENST00000432340 NOSTRINQ8IVI9 506 aa17.31■□□□□ 0.36
NUP50-209ENST00000432340 FAM177A1Q8N128 213 aaPredicted RBP17.31■□□□□ 0.36
NUP50-209ENST00000432340 RPLP0P6Q8NHW5 317 aa17.31■□□□□ 0.36
NUP50-209ENST00000432340 CEP76Q8TAP6 659 aa17.31■□□□□ 0.36
NUP50-209ENST00000432340 ADAMTS14Q8WXS8 1223 aa17.31■□□□□ 0.36
NUP50-209ENST00000432340 P2RY13Q9BPV8 354 aa17.31■□□□□ 0.36
NUP50-209ENST00000432340 POLR3FQ9H1D9 316 aaPredicted RBP17.31■□□□□ 0.36
NUP50-209ENST00000432340 TASP1Q9H6P5 420 aa17.31■□□□□ 0.36
NUP50-209ENST00000432340 PCDHA4Q9UN74 947 aa17.31■□□□□ 0.36
NUP50-209ENST00000432340 PCDHB9Q9Y5E1 797 aa17.31■□□□□ 0.36
NUP50-209ENST00000432340 MAP3K13O43283 966 aa17.3■□□□□ 0.36
NUP50-209ENST00000432340 ALDH1A2O94788 518 aa17.3■□□□□ 0.36
NUP50-209ENST00000432340 EGFP01133 1207 aa17.3■□□□□ 0.36
NUP50-209ENST00000432340 CACNB1Q02641 598 aaPredicted RBP17.3■□□□□ 0.36
NUP50-209ENST00000432340 GFPT1Q06210 699 aaPredicted RBP17.3■□□□□ 0.36
NUP50-209ENST00000432340 NECTIN1Q15223 517 aa17.3■□□□□ 0.36
NUP50-209ENST00000432340 GLRA4Q5JXX5 417 aa17.3■□□□□ 0.36
NUP50-209ENST00000432340 SLC23A3Q6PIS1 610 aa17.3■□□□□ 0.36
NUP50-209ENST00000432340 CCNI2Q6ZMN8 369 aaPredicted RBP17.3■□□□□ 0.36
NUP50-209ENST00000432340 TPH2Q8IWU9 490 aa17.3■□□□□ 0.36
NUP50-209ENST00000432340 CNOT6LQ96LI5 555 aaKnown RBP17.3■□□□□ 0.36
NUP50-209ENST00000432340 GKN1Q9NS71 199 aa17.3■□□□□ 0.36
NUP50-209ENST00000432340 VPS54Q9P1Q0 977 aa17.3■□□□□ 0.36
NUP50-209ENST00000432340 ADAMTS20P59510 1910 aa17.29■□□□□ 0.36
NUP50-209ENST00000432340 WDR81Q562E7 1941 aa17.29■□□□□ 0.36
NUP50-209ENST00000432340 PODXLO00592 558 aa17.29■□□□□ 0.36
NUP50-209ENST00000432340 LYPLA2O95372 231 aa17.29■□□□□ 0.36
NUP50-209ENST00000432340 CDC25CP30307 473 aa17.29■□□□□ 0.36
NUP50-209ENST00000432340 EXOSC10Q01780 885 aaKnown RBP17.29■□□□□ 0.36
NUP50-209ENST00000432340 CDCA2Q69YH5 1023 aaPredicted RBP17.29■□□□□ 0.36
NUP50-209ENST00000432340 CD300LGQ6UXG3 332 aa17.29■□□□□ 0.36
NUP50-209ENST00000432340 ZNF605Q86T29 641 aa17.29■□□□□ 0.36
NUP50-209ENST00000432340 TMC8Q8IU68 726 aa17.29■□□□□ 0.36
NUP50-209ENST00000432340 LSM14AQ8ND56 463 aaKnown RBP17.29■□□□□ 0.36
NUP50-209ENST00000432340 C3orf58Q8NDZ4 430 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms