RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 GDF3Q9NR23 364 aa20.87■□□□□ 0.93
VRK2-205ENST00000432057 NXF1Q9UBU9 619 aaKnown RBP20.87■□□□□ 0.93
VRK2-205ENST00000432057 GINS2Q9Y248 185 aa20.87■□□□□ 0.93
VRK2-205ENST00000432057 A0A0U1RQG5 324 aaPredicted RBP20.86■□□□□ 0.93
VRK2-205ENST00000432057 ITGB3P05106 788 aa20.86■□□□□ 0.93
VRK2-205ENST00000432057 BRD2P25440 801 aaKnown RBP20.86■□□□□ 0.93
VRK2-205ENST00000432057 RAP1GAPP47736 663 aa20.86■□□□□ 0.93
VRK2-205ENST00000432057 MFSD10Q14728 455 aa20.86■□□□□ 0.93
VRK2-205ENST00000432057 SLC10A6Q3KNW5 377 aa20.86■□□□□ 0.93
VRK2-205ENST00000432057 RUFY4Q6ZNE9 571 aa20.86■□□□□ 0.93
VRK2-205ENST00000432057 APBA2Q99767 749 aa20.86■□□□□ 0.93
VRK2-205ENST00000432057 WNT8AQ9H1J5 351 aa20.86■□□□□ 0.93
VRK2-205ENST00000432057 ADAMTS10Q9H324 1103 aa20.86■□□□□ 0.93
VRK2-205ENST00000432057 EPB41L5Q9HCM4 733 aa20.86■□□□□ 0.93
VRK2-205ENST00000432057 PEX5P50542 639 aa20.86■□□□□ 0.93
VRK2-205ENST00000432057 BEX3Q00994 111 aa20.86■□□□□ 0.93
VRK2-205ENST00000432057 HIC1Q14526 733 aa20.86■□□□□ 0.93
VRK2-205ENST00000432057 ADAT2Q7Z6V5 191 aaKnown RBP20.86■□□□□ 0.93
VRK2-205ENST00000432057 IFT20Q8IY31 132 aa20.86■□□□□ 0.93
VRK2-205ENST00000432057 ZFYVE28Q9HCC9 887 aa20.86■□□□□ 0.93
VRK2-205ENST00000432057 ADAM22Q9P0K1 906 aa20.86■□□□□ 0.93
VRK2-205ENST00000432057 GJD2Q9UKL4 321 aa20.86■□□□□ 0.93
VRK2-205ENST00000432057 NR2E1Q9Y466 385 aa20.86■□□□□ 0.93
VRK2-205ENST00000432057 NRCAMQ92823 1304 aa20.85■□□□□ 0.93
VRK2-205ENST00000432057 A0A1B0GUA9 196 aa20.85■□□□□ 0.93
VRK2-205ENST00000432057 TNPO2O14787 897 aaKnown RBP20.85■□□□□ 0.93
VRK2-205ENST00000432057 MYL3P08590 195 aa20.85■□□□□ 0.93
VRK2-205ENST00000432057 CYP2C9P11712 490 aa20.85■□□□□ 0.93
VRK2-205ENST00000432057 OAS2P29728 719 aaKnown RBP20.85■□□□□ 0.93
VRK2-205ENST00000432057 CTNNA1P35221 906 aaKnown RBP20.85■□□□□ 0.93
VRK2-205ENST00000432057 PSEN2P49810 448 aa20.85■□□□□ 0.93
VRK2-205ENST00000432057 CRHR2Q13324 411 aa20.85■□□□□ 0.93
VRK2-205ENST00000432057 MMS22LQ6ZRQ5 1243 aa20.85■□□□□ 0.93
VRK2-205ENST00000432057 PHF13Q86YI8 300 aaPredicted RBP20.85■□□□□ 0.93
VRK2-205ENST00000432057 CASKIN2Q8WXE0 1202 aa20.85■□□□□ 0.93
VRK2-205ENST00000432057 ADPGKQ9BRR6 497 aa20.85■□□□□ 0.93
VRK2-205ENST00000432057 ASB7Q9H672 318 aa20.85■□□□□ 0.93
VRK2-205ENST00000432057 CDHR5Q9HBB8 845 aa20.85■□□□□ 0.93
VRK2-205ENST00000432057 SCN1AP35498 2009 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 FAM155AB1AL88 458 aaPredicted RBP20.84■□□□□ 0.93
VRK2-205ENST00000432057 H3BQF6 201 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 SART1O43290 800 aaKnown RBP20.84■□□□□ 0.93
VRK2-205ENST00000432057 GPR32O75388 356 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 CTNNA2P26232 953 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 CARSP49589 748 aaKnown RBP20.84■□□□□ 0.93
VRK2-205ENST00000432057 GUCY2FP51841 1108 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 EPHB4P54760 987 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 PTP4A2Q12974 167 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 TMEM132DQ14C87 1099 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 KYAT1Q16773 422 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 ZNF667Q5HYK9 610 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 LIN9Q5TKA1 542 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 CXorf38Q8TB03 319 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 SOCS4Q8WXH5 440 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 OSMRQ99650 979 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 ERVK-5Q9HDB9 667 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 HPCAL4Q9UM19 191 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 PASKQ96RG2 1323 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 MBLAC1A4D2B0 266 aaPredicted RBP20.84■□□□□ 0.93
VRK2-205ENST00000432057 NPTXRO95502 500 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 CTGFP29279 349 aa20.84■□□□□ 0.93
VRK2-205ENST00000432057 POU5F1Q01860 360 aaKnown RBP20.84■□□□□ 0.93
VRK2-205ENST00000432057 SND1Q7KZF4 910 aaKnown RBP eCLIP20.84■□□□□ 0.93
VRK2-205ENST00000432057 GCOM2Q9BZD3 368 aaPredicted RBP20.84■□□□□ 0.93
VRK2-205ENST00000432057 SMIM35A0A1B0GVV1 85 aa20.83■□□□□ 0.92
VRK2-205ENST00000432057 CCDC66A2RUB6 948 aa20.83■□□□□ 0.92
VRK2-205ENST00000432057 CPT1AP50416 773 aa20.83■□□□□ 0.92
VRK2-205ENST00000432057 YWHAEP62258 255 aaKnown RBP20.83■□□□□ 0.92
VRK2-205ENST00000432057 TRADDQ15628 312 aa20.83■□□□□ 0.92
VRK2-205ENST00000432057 WDR72Q3MJ13 1102 aa20.83■□□□□ 0.92
VRK2-205ENST00000432057 SEL1L2Q5TEA6 688 aa20.83■□□□□ 0.92
VRK2-205ENST00000432057 CATSPER4Q7RTX7 472 aa20.83■□□□□ 0.92
VRK2-205ENST00000432057 C1orf131Q8NDD1 294 aaKnown RBP20.83■□□□□ 0.92
VRK2-205ENST00000432057 IFT81Q8WYA0 676 aa20.83■□□□□ 0.92
VRK2-205ENST00000432057 TFAP2BQ92481 460 aa20.83■□□□□ 0.92
VRK2-205ENST00000432057 ACAP3Q96P50 834 aa20.83■□□□□ 0.92
VRK2-205ENST00000432057 NAP1L3Q99457 506 aaPredicted RBP20.83■□□□□ 0.92
VRK2-205ENST00000432057 BCO2Q9BYV7 579 aa20.83■□□□□ 0.92
VRK2-205ENST00000432057 AP5M1Q9H0R1 490 aa20.83■□□□□ 0.92
VRK2-205ENST00000432057 SDCBP2Q9H190 292 aa20.83■□□□□ 0.92
VRK2-205ENST00000432057 SLITRK6Q9H5Y7 841 aa20.83■□□□□ 0.92
VRK2-205ENST00000432057 SMYD3Q9H7B4 428 aa20.83■□□□□ 0.92
VRK2-205ENST00000432057 GPBP1L1Q9HC44 474 aaPredicted RBP20.83■□□□□ 0.92
VRK2-205ENST00000432057 NFU1Q9UMS0 254 aa20.83■□□□□ 0.92
VRK2-205ENST00000432057 PCDHA3Q9Y5H8 950 aa20.83■□□□□ 0.92
VRK2-205ENST00000432057 HAS3O00219 553 aa20.82■□□□□ 0.92
VRK2-205ENST00000432057 POLR2BP30876 1174 aaKnown RBP20.82■□□□□ 0.92
VRK2-205ENST00000432057 GRM5P41594 1212 aa20.82■□□□□ 0.92
VRK2-205ENST00000432057 CDH8P55286 799 aa20.82■□□□□ 0.92
VRK2-205ENST00000432057 INHBEP58166 350 aa20.82■□□□□ 0.92
VRK2-205ENST00000432057 C1QBPQ07021 282 aaKnown RBP20.82■□□□□ 0.92
VRK2-205ENST00000432057 KCTD19Q17RG1 926 aaPredicted RBP20.82■□□□□ 0.92
VRK2-205ENST00000432057 DCAF4L1Q3SXM0 396 aa20.82■□□□□ 0.92
VRK2-205ENST00000432057 VCPIP1Q96JH7 1222 aa20.82■□□□□ 0.92
VRK2-205ENST00000432057 VIPAS39Q9H9C1 493 aa20.82■□□□□ 0.92
VRK2-205ENST00000432057 AMACRQ9UHK6 382 aa20.82■□□□□ 0.92
VRK2-205ENST00000432057 GJB6O95452 261 aa20.81■□□□□ 0.92
VRK2-205ENST00000432057 IGHA2P01877 340 aa20.81■□□□□ 0.92
VRK2-205ENST00000432057 PYGMP11217 842 aa20.81■□□□□ 0.92
VRK2-205ENST00000432057 HOXA11P31270 313 aaPredicted RBP20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms