RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 CENPCQ03188 943 aa13.69□□□□□ -0.22
DDX56-204ENST00000431640 MKRN4PQ13434 485 aaPredicted RBP13.69□□□□□ -0.22
DDX56-204ENST00000431640 MTMR3Q13615 1198 aa13.69□□□□□ -0.22
DDX56-204ENST00000431640 LRIG3Q6UXM1 1119 aa13.69□□□□□ -0.22
DDX56-204ENST00000431640 FAM76AQ8TAV0 307 aa13.69□□□□□ -0.22
DDX56-204ENST00000431640 ALG3Q92685 438 aa13.69□□□□□ -0.22
DDX56-204ENST00000431640 NFKBIZQ9BYH8 718 aa13.69□□□□□ -0.22
DDX56-204ENST00000431640 FZD8Q9H461 694 aa13.69□□□□□ -0.22
DDX56-204ENST00000431640 GOLGA6AQ9NYA3 693 aa13.69□□□□□ -0.22
DDX56-204ENST00000431640 LCMT1Q9UIC8 334 aa13.69□□□□□ -0.22
DDX56-204ENST00000431640 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.69□□□□□ -0.22
DDX56-204ENST00000431640 MYO1FO00160 1098 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 PHF2O75151 1096 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 FAM153BP0C7A2 387 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 LMAN1P49257 510 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 GUCY2FP51841 1108 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 GYS2P54840 703 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 WNT7BP56706 349 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 NOP14P78316 857 aaKnown RBP13.68□□□□□ -0.22
DDX56-204ENST00000431640 DR1Q01658 176 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 TNFAIP2Q03169 654 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 DRP2Q13474 957 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 FAM153CQ494X1 144 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 SPDYCQ5MJ68 293 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 EFCAB12Q6NXP0 572 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 MPZL3Q6UWV2 235 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 RHPN2Q8IUC4 686 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 TSEN2Q8NCE0 465 aaKnown RBP13.68□□□□□ -0.22
DDX56-204ENST00000431640 EMID1Q96A84 441 aaPredicted RBP13.68□□□□□ -0.22
DDX56-204ENST00000431640 FAXDC2Q96IV6 333 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 ERP44Q9BS26 406 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 ZMYND15Q9H091 742 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 FAM153AQ9UHL3 310 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 CPSF3Q9UKF6 684 aaKnown RBP13.68□□□□□ -0.22
DDX56-204ENST00000431640 PTPRJQ12913 1337 aa13.68□□□□□ -0.22
DDX56-204ENST00000431640 TTI1O43156 1089 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 FAM189A1O60320 539 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 ASS1P00966 412 aaKnown RBP13.67□□□□□ -0.22
DDX56-204ENST00000431640 GNRH1P01148 92 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 GH1P01241 217 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 HMGCRP04035 888 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 INHAP05111 366 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 EDN1P05305 212 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 PROZP22891 400 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 GNA15P30679 374 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 YWHAEP62258 255 aaKnown RBP13.67□□□□□ -0.22
DDX56-204ENST00000431640 ZNF211Q13398 564 aaPredicted RBP13.67□□□□□ -0.22
DDX56-204ENST00000431640 TRPC3Q13507 836 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 KYAT1Q16773 422 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 ZBTB41Q5SVQ8 909 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 MFSD14CQ5VZR4 134 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 IQSEC1Q6DN90 963 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 TMEM270Q6UE05 265 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 LEKR1Q6ZMV7 388 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 ZBTB33Q86T24 672 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 TLK2Q86UE8 772 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 PHF13Q86YI8 300 aaPredicted RBP13.67□□□□□ -0.22
DDX56-204ENST00000431640 RBBP8NLQ8NC74 664 aaPredicted RBP13.67□□□□□ -0.22
DDX56-204ENST00000431640 OR5B17Q8NGF7 314 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 RAET1EQ8TD07 263 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 SH3TC2Q8TF17 1288 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 AFG1LQ8WV93 481 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 ZIM3Q96PE6 472 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 APOBEC3GQ9HC16 384 aaKnown RBP13.67□□□□□ -0.22
DDX56-204ENST00000431640 PTPRHQ9HD43 1115 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 PRMT7Q9NVM4 692 aaPredicted RBP13.67□□□□□ -0.22
DDX56-204ENST00000431640 PARP2Q9UGN5 583 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 PCYOX1Q9UHG3 505 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 NUB1Q9Y5A7 615 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 SCINQ9Y6U3 715 aa13.67□□□□□ -0.22
DDX56-204ENST00000431640 DAPK3O43293 454 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 ATMINO43313 823 aaPredicted RBP13.66□□□□□ -0.22
DDX56-204ENST00000431640 B4GALT4O60513 344 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 IL18RAPO95256 599 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 TNNC2P02585 160 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 MMP3P08254 477 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 ZNF286BP0CG31 522 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 PYGMP11217 842 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 HARSP12081 509 aaKnown RBP13.66□□□□□ -0.22
DDX56-204ENST00000431640 HOXD8P13378 290 aaPredicted RBP13.66□□□□□ -0.22
DDX56-204ENST00000431640 CAPN2P17655 700 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 HOXD10P28358 340 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 C1QBPQ07021 282 aaKnown RBP13.66□□□□□ -0.22
DDX56-204ENST00000431640 PTP4A2Q12974 167 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 CYP1B1Q16678 543 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 FAM187BQ17R55 369 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 ATF7IP2Q5U623 682 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 SPOPLQ6IQ16 392 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 SLC13A5Q86YT5 568 aaPredicted RBP13.66□□□□□ -0.22
DDX56-204ENST00000431640 LRRC71Q8N4P6 559 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 OR6J1Q8NGC5 347 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 PPTC7Q8NI37 304 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 PXYLP1Q8TE99 480 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 CPA5Q8WXQ8 436 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 KRT35Q92764 455 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 MAGOHBQ96A72 148 aaKnown RBP13.66□□□□□ -0.22
DDX56-204ENST00000431640 CYFIP2Q96F07 1278 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 ANKRD36BP1Q96IX9 119 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 FAM129AQ9BZQ8 928 aa13.66□□□□□ -0.22
DDX56-204ENST00000431640 PLEKHA4Q9H4M7 779 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms