RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 ZNF518BQ9C0D4 1074 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 VPS11Q9H270 941 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 BRD9Q9H8M2 597 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 PPCSQ9HAB8 311 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 ARFGAP3Q9NP61 516 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 SRRDQ9UH36 339 aa3.85□□□□□ -1.79
HMGB1P27-201ENST00000431429 A0A087WZ62 844 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 A0A1W2PRX2 142 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 APOL1O14791 398 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 AREL1O15033 823 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 ADAMTS3O15072 1205 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 KCNQ3O43525 872 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 NBNO60934 754 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 CHEK2O96017 543 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 POMCP01189 267 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 GNAI3P08754 354 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 INHBBP09529 407 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 HARSP12081 509 aaKnown RBP3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 VEGFAP15692 232 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 KLRC1P26715 233 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 RPS19P39019 145 aaKnown RBP3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 SLC11A2P49281 568 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 TOB1P50616 345 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 GNAI1P63096 354 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 CREMQ03060 361 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 SLC13A2Q13183 592 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 RAPGEF1Q13905 1077 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 DCAF17Q5H9S7 520 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 CRB2Q5IJ48 1285 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 FKBP15Q5T1M5 1219 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 KLHDC7AQ5VTJ3 777 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 NAIF1Q69YI7 327 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 CIAPIN1Q6FI81 312 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 MFSD5Q6N075 450 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 BORAQ6PGQ7 559 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 UBE3BQ7Z3V4 1068 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 TMPRSS9Q7Z410 1059 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 FAM124AQ86V42 546 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 XYLT1Q86Y38 959 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 LIX1LQ8IVB5 337 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 LGI4Q8N135 537 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 VGLL2Q8N8G2 317 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 FANCBQ8NB91 859 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 MDGA1Q8NFP4 955 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 DNERQ8NFT8 737 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 OR56A3Q8NH54 315 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 DDX17Q92841 729 aaKnown RBP3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 SNX22Q96L94 193 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 NELL2Q99435 816 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 SPATA5L1Q9BVQ7 753 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 SSBP3Q9BWW4 388 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 PLA2G12BQ9BX93 195 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 TINAGL1Q9GZM7 467 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 AGO4Q9HCK5 861 aaKnown RBP3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 SERHLQ9NQF3 203 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 ETAA1Q9NY74 926 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 VSX1Q9NZR4 365 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 LUZP4Q9P127 313 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 NCDNQ9UBB6 729 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 CDC23Q9UJX2 597 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 CAPN11Q9UMQ6 739 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 PLEKHM1Q9Y4G2 1056 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 PCDHGB2Q9Y5G2 931 aa3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.84□□□□□ -1.79
HMGB1P27-201ENST00000431429 PYCARD-AS1I3L0S3 204 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 KIAA0391O15091 583 aaKnown RBP3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 CDC14BO60729 498 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 TRIM13O60858 407 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 PRSS23O95084 383 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 UNC5CO95185 931 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 A1BGP04217 495 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 TXNP10599 105 aaKnown RBP3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 PIM1P11309 404 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 GCSHP23434 173 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 SLC6A2P23975 617 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 EEF1GP26641 437 aaKnown RBP3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 PDIA3P30101 505 aaKnown RBP3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 GRK6P43250 576 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 PHKA1P46020 1223 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 RAP1GAPP47736 663 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 KCNC1P48547 511 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 WNT3P56703 355 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 NOMO3P69849 1222 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 POU6F2P78424 691 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 GALNT1Q10472 559 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 FSTL1Q12841 308 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 SURF1Q15526 300 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 ATXN7L2Q5T6C5 722 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 NT5DC1Q5TFE4 455 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 SLFN13Q68D06 897 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 ARHGEF18Q6ZSZ5 1173 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 USP37Q86T82 979 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 FAM83AQ86UY5 434 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 GAS2L3Q86XJ1 694 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 MYLK4Q86YV6 388 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 SYT12Q8IV01 421 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 MYRIPQ8NFW9 859 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 ZFP28Q8NHY6 868 aa3.83□□□□□ -1.8
HMGB1P27-201ENST00000431429 PPM1EQ8WY54 764 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms