RNA–Protein interactions for RNA: ENST00000430982.1

PTCD1-204, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-204ENST00000430982 CHST7Q9NS84 486 aa16.49■□□□□ 0.23
PTCD1-204ENST00000430982 DLL3Q9NYJ7 618 aa16.49■□□□□ 0.23
PTCD1-204ENST00000430982 I3L4J1 428 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 EXTL3O43909 919 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 LILRB3O75022 631 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 LDHAP00338 332 aaKnown RBP16.48■□□□□ 0.23
PTCD1-204ENST00000430982 ADRB2P07550 413 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 NFICP08651 508 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 CNPP09543 421 aaKnown RBP16.48■□□□□ 0.23
PTCD1-204ENST00000430982 BRCC3P46736 316 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 FAM160A1Q05DH4 1040 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 DPYDQ12882 1025 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 STK4Q13043 487 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 PSMD2Q13200 908 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 TDGQ13569 410 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 TMEM132DQ14C87 1099 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 KANK3Q6NY19 840 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 CD300LGQ6UXG3 332 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 CRELD2Q6UXH1 353 aaPredicted RBP16.48■□□□□ 0.23
PTCD1-204ENST00000430982 C3orf58Q8NDZ4 430 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 BEST2Q8NFU1 509 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 TSPAN18Q96SJ8 248 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 TTPALQ9BTX7 342 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 NUB1Q9Y5A7 615 aa16.48■□□□□ 0.23
PTCD1-204ENST00000430982 ZFHX4Q86UP3 3567 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 TEX28O15482 410 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 TRAPPC3O43617 180 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 IL18RAPO95256 599 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 EPCAMP16422 314 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 CYP3A5P20815 502 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 PUM1Q14671 1186 aaKnown RBP eCLIP16.47■□□□□ 0.235e-7■■□□□ 11.4
PTCD1-204ENST00000430982 ZBTB6Q15916 424 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 BMT2Q1RMZ1 405 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 RTP2Q5QGT7 225 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 PRSS55Q6UWB4 352 aaPredicted RBP16.47■□□□□ 0.23
PTCD1-204ENST00000430982 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.47■□□□□ 0.23
PTCD1-204ENST00000430982 HS2ST1Q7LGA3 356 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 PPFIBP1Q86W92 1011 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 GLYCTKQ8IVS8 523 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 BRSK2Q8IWQ3 736 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 GPD1LQ8N335 351 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 KIAA0895Q8NCT3 520 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 ASB7Q9H672 318 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 RXFP1Q9HBX9 757 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.47■□□□□ 0.231e-7■□□□□ 10
PTCD1-204ENST00000430982 AGPAT3Q9NRZ7 376 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 RBAKQ9NYW8 714 aaPredicted RBP16.47■□□□□ 0.23
PTCD1-204ENST00000430982 HSPBP1Q9NZL4 362 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 DERAQ9Y315 318 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.47■□□□□ 0.23
PTCD1-204ENST00000430982 C2orf16Q68DN1 1984 aa16.47■□□□□ 0.23
PTCD1-204ENST00000430982 TPRP12270 2363 aaKnown RBP16.46■□□□□ 0.23
PTCD1-204ENST00000430982 KIAA0391O15091 583 aaKnown RBP16.46■□□□□ 0.23
PTCD1-204ENST00000430982 CLIC2O15247 247 aa16.46■□□□□ 0.23
PTCD1-204ENST00000430982 TGFB1I1O43294 461 aa16.46■□□□□ 0.23
PTCD1-204ENST00000430982 GADD45BO75293 160 aaPredicted RBP16.46■□□□□ 0.23
PTCD1-204ENST00000430982 ADH1AP07327 375 aa16.46■□□□□ 0.23
PTCD1-204ENST00000430982 RPL17P18621 184 aaKnown RBP16.46■□□□□ 0.23
PTCD1-204ENST00000430982 TKTP29401 623 aaKnown RBP16.46■□□□□ 0.23
PTCD1-204ENST00000430982 LRPAP1P30533 357 aa16.46■□□□□ 0.23
PTCD1-204ENST00000430982 MCM4P33991 863 aa16.46■□□□□ 0.23
PTCD1-204ENST00000430982 CYP2J2P51589 502 aa16.46■□□□□ 0.23
PTCD1-204ENST00000430982 POU5F1Q01860 360 aaKnown RBP16.46■□□□□ 0.23
PTCD1-204ENST00000430982 CREMQ03060 361 aa16.46■□□□□ 0.23
PTCD1-204ENST00000430982 PNOCQ13519 176 aa16.46■□□□□ 0.23
PTCD1-204ENST00000430982 SNW1Q13573 536 aaKnown RBP16.46■□□□□ 0.23
PTCD1-204ENST00000430982 KNOP1Q1ED39 458 aaKnown RBP16.46■□□□□ 0.23
PTCD1-204ENST00000430982 SPATA1Q5VX52 437 aa16.46■□□□□ 0.23
PTCD1-204ENST00000430982 GPR149Q86SP6 731 aa16.46■□□□□ 0.23
PTCD1-204ENST00000430982 ENGASEQ8NFI3 743 aa16.46■□□□□ 0.23
PTCD1-204ENST00000430982 KCNK12Q9HB15 430 aa16.46■□□□□ 0.23
PTCD1-204ENST00000430982 SPDYE4A6NLX3 237 aa16.45■□□□□ 0.22
PTCD1-204ENST00000430982 FGFR3P22607 806 aa16.45■□□□□ 0.22
PTCD1-204ENST00000430982 PSMD5Q16401 504 aa16.45■□□□□ 0.22
PTCD1-204ENST00000430982 OTOP3Q7RTS5 596 aa16.45■□□□□ 0.22
PTCD1-204ENST00000430982 PALB2Q86YC2 1186 aa16.45■□□□□ 0.22
PTCD1-204ENST00000430982 EFCAB13Q8IY85 973 aa16.45■□□□□ 0.22
PTCD1-204ENST00000430982 GPR65Q8IYL9 337 aa16.45■□□□□ 0.22
PTCD1-204ENST00000430982 KIAA2013Q8IYS2 634 aa16.45■□□□□ 0.22
PTCD1-204ENST00000430982 SIX5Q8N196 739 aa16.45■□□□□ 0.22
PTCD1-204ENST00000430982 PIK3R5Q8WYR1 880 aa16.45■□□□□ 0.22
PTCD1-204ENST00000430982 ACSF2Q96CM8 615 aaPredicted RBP16.45■□□□□ 0.22
PTCD1-204ENST00000430982 SFXN1Q9H9B4 322 aa16.45■□□□□ 0.22
PTCD1-204ENST00000430982 WNT16Q9UBV4 365 aa16.45■□□□□ 0.22
PTCD1-204ENST00000430982 C2CD2Q9Y426 696 aa16.45■□□□□ 0.22
PTCD1-204ENST00000430982 ACACBO00763 2458 aa16.44■□□□□ 0.22
PTCD1-204ENST00000430982 KRBA1A5PL33 1030 aa16.44■□□□□ 0.22
PTCD1-204ENST00000430982 ZNF233A6NK53 670 aa16.44■□□□□ 0.22
PTCD1-204ENST00000430982 PPEF2O14830 753 aa16.44■□□□□ 0.22
PTCD1-204ENST00000430982 RHOBTB3O94955 611 aa16.44■□□□□ 0.22
PTCD1-204ENST00000430982 GLUD1P00367 558 aa16.44■□□□□ 0.22
PTCD1-204ENST00000430982 CLCN4P51793 760 aa16.44■□□□□ 0.22
PTCD1-204ENST00000430982 WNT7BP56706 349 aa16.44■□□□□ 0.22
PTCD1-204ENST00000430982 SNRPFP62306 86 aaKnown RBP16.44■□□□□ 0.22
PTCD1-204ENST00000430982 TFAMQ00059 246 aaKnown RBP16.44■□□□□ 0.22
PTCD1-204ENST00000430982 KCNB1Q14721 858 aa16.44■□□□□ 0.22
PTCD1-204ENST00000430982 PDXDC1Q6P996 788 aa16.44■□□□□ 0.22
PTCD1-204ENST00000430982 TMC5Q6UXY8 1006 aa16.44■□□□□ 0.22
PTCD1-204ENST00000430982 CCDC149Q6ZUS6 474 aa16.44■□□□□ 0.22
PTCD1-204ENST00000430982 CBWD2Q8IUF1 395 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms