RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 SPG21Q9NZD8 308 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 CACNG4Q9UBN1 327 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 DAAM1Q9Y4D1 1078 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 RANBP2P49792 3224 aaKnown RBP11.83□□□□□ -0.52
CHD4-202ENST00000430771 PLXNA4Q9HCM2 1894 aa11.83□□□□□ -0.52
CHD4-202ENST00000430771 KPNA7A9QM74 516 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 NT5C1B-RDH14C9J2C7 533 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 C5orf67F2Z3F1 127 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 SYN3O14994 580 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 LINC00271P0C7V0 271 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 RFX1P22670 979 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 TBXAS1P24557 533 aaPredicted RBP11.82□□□□□ -0.52
CHD4-202ENST00000430771 BMPR1AP36894 532 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 PBX3P40426 434 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 LILRA4P59901 499 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 ERVK-21P61565 698 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 PLCB2Q00722 1185 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 TAP1Q03518 808 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 KRT17Q04695 432 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 UBE3AQ05086 875 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 TRIM65Q6PJ69 517 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 DSTYKQ6XUX3 929 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.82□□□□□ -0.52
CHD4-202ENST00000430771 FBXO22Q8NEZ5 403 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 SPATA18Q8TC71 538 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 FAXDC2Q96IV6 333 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 SUSD3Q96L08 255 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 PCMTD1Q96MG8 357 aaPredicted RBP11.82□□□□□ -0.52
CHD4-202ENST00000430771 HERC2P3Q9BVR0 1158 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 INTS2Q9H0H0 1204 aaKnown RBP11.82□□□□□ -0.52
CHD4-202ENST00000430771 RTN4Q9NQC3 1192 aaKnown RBP11.82□□□□□ -0.52
CHD4-202ENST00000430771 IFNKQ9P0W0 207 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 DSEQ9UL01 958 aa11.82□□□□□ -0.52
CHD4-202ENST00000430771 GOLGA6L3A6NEY3 463 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 HUS1O60921 280 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 FGF18O76093 207 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 SOD2P04179 222 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 URODP06132 367 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 YWHAEP62258 255 aaKnown RBP11.81□□□□□ -0.52
CHD4-202ENST00000430771 PLCB3Q01970 1234 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 BMS1Q14692 1282 aaKnown RBP11.81□□□□□ -0.52
CHD4-202ENST00000430771 WDR72Q3MJ13 1102 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 PDXDC1Q6P996 788 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 TMEM173Q86WV6 379 aaPredicted RBP11.81□□□□□ -0.52
CHD4-202ENST00000430771 TMEM130Q8N3G9 435 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 TOP6BLQ8N6T0 577 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 APPL2Q8NEU8 664 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 RABGGTAQ92696 567 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 SEMA4DQ92854 862 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 ERGIC2Q96RQ1 377 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 C17orf80Q9BSJ5 609 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 PI4K2AQ9BTU6 479 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 LSM14BQ9BX40 385 aaKnown RBP11.81□□□□□ -0.52
CHD4-202ENST00000430771 XYLT2Q9H1B5 865 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 FAM124BQ9H5Z6 455 aaPredicted RBP11.81□□□□□ -0.52
CHD4-202ENST00000430771 GDAP2Q9NXN4 497 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 APEX2Q9UBZ4 518 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 PUF60Q9UHX1 559 aaKnown RBP11.81□□□□□ -0.52
CHD4-202ENST00000430771 MTUS1Q9ULD2 1270 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 PCDHB8Q9UN66 801 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 LZTS1Q9Y250 596 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 SNX9Q9Y5X1 595 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 VWA8A3KMH1 1905 aa11.81□□□□□ -0.52
CHD4-202ENST00000430771 A0A1W2PQC6 194 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 M0QZQ0 153 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 ARHGEF15O94989 841 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 CST3P01034 146 aaPredicted RBP11.8□□□□□ -0.52
CHD4-202ENST00000430771 ITGB1P05556 798 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 TRIM21P19474 475 aaKnown RBP11.8□□□□□ -0.52
CHD4-202ENST00000430771 TYMPP19971 482 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 BRCC3P46736 316 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 GCNT1Q02742 428 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 SYCP1Q15431 976 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 USP41Q3LFD5 358 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 TIGD5Q53EQ6 642 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 FAM171A1Q5VUB5 890 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 ZNF280DQ6N043 979 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 SCARA5Q6ZMJ2 495 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 ENOSF1Q7L5Y1 443 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 DPH6Q7L8W6 267 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 DDX53Q86TM3 631 aaKnown RBP11.8□□□□□ -0.52
CHD4-202ENST00000430771 METTL23Q86XA0 190 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 RNF168Q8IYW5 571 aaPredicted RBP11.8□□□□□ -0.52
CHD4-202ENST00000430771 ADGRF2Q8IZF7 708 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 TMEM86AQ8N2M4 240 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 PPM1KQ8N3J5 372 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 TTC39CQ8N584 583 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 KLHL23Q8NBE8 558 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 EHBP1Q8NDI1 1231 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 BCL7CQ8WUZ0 217 aaPredicted RBP11.8□□□□□ -0.52
CHD4-202ENST00000430771 IQCDQ96DY2 449 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 SENP8Q96LD8 212 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 MMS19Q96T76 1030 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 CRACR2AQ9BSW2 395 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 TRIM5Q9C035 493 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 XPO4Q9C0E2 1151 aaKnown RBP11.8□□□□□ -0.52
CHD4-202ENST00000430771 DNAI2Q9GZS0 605 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 CYP3A43Q9HB55 503 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 PLCB1Q9NQ66 1216 aa11.8□□□□□ -0.52
CHD4-202ENST00000430771 NXF1Q9UBU9 619 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms