RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 MTMR2Q13614 643 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 CAPRIN2Q6IMN6 1127 aaKnown RBP13.2□□□□□ -0.3
CDH3-202ENST00000429102 NLRX1Q86UT6 975 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 ZC3H18Q86VM9 953 aaKnown RBP13.2□□□□□ -0.3
CDH3-202ENST00000429102 EMC1Q8N766 993 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 GMCL1P1Q8NEA9 526 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.2□□□□□ -0.3
CDH3-202ENST00000429102 TARS2Q9BW92 718 aaKnown RBP13.2□□□□□ -0.3
CDH3-202ENST00000429102 KIAA1586Q9HCI6 787 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 UVRAGQ9P2Y5 699 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 COL22A1Q8NFW1 1626 aaPredicted RBP13.2□□□□□ -0.3
CDH3-202ENST00000429102 BHMG1C9JSJ3 638 aaPredicted RBP13.2□□□□□ -0.3
CDH3-202ENST00000429102 CYP1A2P05177 515 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 ADRA2BP18089 450 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 LIN9Q5TKA1 542 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 BTNL9Q6UXG8 535 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 ANO5Q75V66 913 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 ZNF516Q92618 1163 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 ZBTB10Q96DT7 871 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 A1CFQ9NQ94 594 aaKnown RBP13.2□□□□□ -0.3
CDH3-202ENST00000429102 GRID1Q9ULK0 1009 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 CHKBQ9Y259 395 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 ADGRA3Q8IWK6 1321 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 H0YIN7 160 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 IVDP26440 423 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 HOXA7P31268 230 aaPredicted RBP13.2□□□□□ -0.3
CDH3-202ENST00000429102 BAATQ14032 418 aaPredicted RBP13.2□□□□□ -0.3
CDH3-202ENST00000429102 LRRC6Q86X45 466 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 PALM2Q8IXS6 379 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 GRK7Q8WTQ7 553 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 P3H4Q92791 437 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 WNK4Q96J92 1243 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 CYTH2Q99418 400 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 ROPN1BQ9BZX4 212 aaPredicted RBP13.2□□□□□ -0.3
CDH3-202ENST00000429102 SYNCQ9H7C4 482 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 ROPN1Q9HAT0 212 aaPredicted RBP13.2□□□□□ -0.3
CDH3-202ENST00000429102 TMEM8AQ9HCN3 771 aa13.2□□□□□ -0.3
CDH3-202ENST00000429102 FBXO6Q9NRD1 293 aaPredicted RBP13.2□□□□□ -0.3
CDH3-202ENST00000429102 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.2□□□□□ -0.3
CDH3-202ENST00000429102 ASTN2O75129 1339 aaPredicted RBP13.2□□□□□ -0.3
CDH3-202ENST00000429102 E2F8A0AVK6 867 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 EME2A4GXA9 379 aaPredicted RBP13.19□□□□□ -0.3
CDH3-202ENST00000429102 FDX1P10109 184 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 CETN2P41208 172 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 MUM1Q2TAK8 710 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 STRIP1Q5VSL9 837 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 RFWD3Q6PCD5 774 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 TMEM161BQ8NDZ6 487 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 PRR11Q96HE9 360 aaPredicted RBP13.19□□□□□ -0.3
CDH3-202ENST00000429102 CALN1Q9BXU9 219 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 WHRNQ9P202 907 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 STK24Q9Y6E0 443 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 XIRP1Q702N8 1843 aaKnown RBP13.19□□□□□ -0.3
CDH3-202ENST00000429102 SRRM3A6NNA2 597 aaPredicted RBP13.19□□□□□ -0.3
CDH3-202ENST00000429102 CSDE1O75534 798 aaKnown RBP13.19□□□□□ -0.3
CDH3-202ENST00000429102 MARK3P27448 753 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 ALDH3A1P30838 453 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 NFX1Q12986 1120 aaKnown RBP13.19□□□□□ -0.3
CDH3-202ENST00000429102 ALCAMQ13740 583 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 SPARCL1Q14515 664 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 RHOT1Q8IXI2 618 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 LARGE2Q8N3Y3 721 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 PYROXD1Q8WU10 500 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 HSPH1Q92598 858 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 DDX27Q96GQ7 796 aaKnown RBP13.19□□□□□ -0.3
CDH3-202ENST00000429102 MASTLQ96GX5 879 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 TBC1D10AQ9BXI6 508 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 SHCBP1LQ9BZQ2 653 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 ZCWPW1Q9H0M4 648 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 TJP2Q9UDY2 1190 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 ZFP69BQ9UJL9 534 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 EXOC7Q9UPT5 735 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 CHMP2BQ9UQN3 213 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 POTEJP0CG39 1038 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 ZNF268Q14587 947 aaPredicted RBP13.19□□□□□ -0.3
CDH3-202ENST00000429102 SLC15A2Q16348 729 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 CDO1Q16878 200 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 LRRC36Q1X8D7 754 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 TMEM63BQ5T3F8 832 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 SLC39A4Q6P5W5 647 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 C3orf62Q6ZUJ4 267 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 ANKLE1Q8NAG6 615 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 HIPK4Q8NE63 616 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 UTP4Q969X6 686 aaKnown RBP13.19□□□□□ -0.3
CDH3-202ENST00000429102 GJD4Q96KN9 370 aaPredicted RBP13.19□□□□□ -0.3
CDH3-202ENST00000429102 MAK16Q9BXY0 300 aaKnown RBP13.19□□□□□ -0.3
CDH3-202ENST00000429102 SLC13A1Q9BZW2 595 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 AGO4Q9HCK5 861 aaKnown RBP13.19□□□□□ -0.3
CDH3-202ENST00000429102 TMX2Q9Y320 296 aa13.19□□□□□ -0.3
CDH3-202ENST00000429102 GRAP2O75791 330 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 GGPS1O95749 300 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 GTF2H1P32780 548 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 CYP24A1Q07973 514 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 SGSM1Q2NKQ1 1148 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 THEMIS2Q5TEJ8 643 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 VPS52Q8N1B4 723 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 OR5B17Q8NGF7 314 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 RFWD2Q8NHY2 731 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 MAML1Q92585 1016 aa13.18□□□□□ -0.3
CDH3-202ENST00000429102 MAGEB18Q96M61 343 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms