RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 POU3F3P20264 500 aaPredicted RBP15.68■□□□□ 0.1
SGCE-204ENST00000428696 PNPLA4P41247 253 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 TYRO3Q06418 890 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 PTPN14Q15678 1187 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 KIAA0319Q5VV43 1072 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.68■□□□□ 0.1
SGCE-204ENST00000428696 METTL23Q86XA0 190 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 APPL2Q8NEU8 664 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 ELMO3Q96BJ8 720 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 SUSD3Q96L08 255 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 ZNF560Q96MR9 790 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 MMS19Q96T76 1030 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 NXF1Q9UBU9 619 aaKnown RBP15.68■□□□□ 0.1
SGCE-204ENST00000428696 SIX4Q9UIU6 781 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 RALGAPA2Q2PPJ7 1873 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 TRANK1O15050 2925 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 SYCE3A1L190 88 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 MAPK13O15264 365 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 SLC16A3O15427 465 aaKnown RBP15.68■□□□□ 0.1
SGCE-204ENST00000428696 STX10O60499 249 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 CNPP09543 421 aaKnown RBP15.68■□□□□ 0.1
SGCE-204ENST00000428696 SPATA31D3P0C874 917 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 ODC1P11926 461 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 AP3M2P53677 418 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 MYL6P60660 151 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 DSG1Q02413 1049 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 HYAL1Q12794 435 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 NCOA4Q13772 614 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 PSMD5Q16401 504 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 VARS2Q5ST30 1063 aaKnown RBP15.68■□□□□ 0.1
SGCE-204ENST00000428696 TDRD10Q5VZ19 366 aaKnown RBP15.68■□□□□ 0.1
SGCE-204ENST00000428696 RBM43Q6ZSC3 357 aaKnown RBP15.68■□□□□ 0.1
SGCE-204ENST00000428696 SPATA31D4Q6ZUB0 917 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 SV2AQ7L0J3 742 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 MKNK1Q9BUB5 465 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 GZF1Q9H116 711 aaPredicted RBP15.68■□□□□ 0.1
SGCE-204ENST00000428696 DNAJC25Q9H1X3 360 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 METTL14Q9HCE5 456 aaKnown RBP15.68■□□□□ 0.1
SGCE-204ENST00000428696 CHST7Q9NS84 486 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 CLDND1Q9NY35 253 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 MAGEC2Q9UBF1 373 aaPredicted RBP15.68■□□□□ 0.1
SGCE-204ENST00000428696 PCDHB8Q9UN66 801 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 SNX9Q9Y5X1 595 aa15.68■□□□□ 0.1
SGCE-204ENST00000428696 MYO7AQ13402 2215 aa15.67■□□□□ 0.1
SGCE-204ENST00000428696 PRRC2BQ5JSZ5 2229 aaKnown RBP15.67■□□□□ 0.1
SGCE-204ENST00000428696 IKBKBO14920 756 aa15.67■□□□□ 0.1
SGCE-204ENST00000428696 HUS1O60921 280 aa15.67■□□□□ 0.1
SGCE-204ENST00000428696 GNA14O95837 355 aa15.67■□□□□ 0.1
SGCE-204ENST00000428696 C4BPAP04003 597 aaKnown RBP15.67■□□□□ 0.1
SGCE-204ENST00000428696 CCDC192P0DO97 292 aa15.67■□□□□ 0.1
SGCE-204ENST00000428696 FGFR3P22607 806 aa15.67■□□□□ 0.1
SGCE-204ENST00000428696 ERCC5P28715 1186 aaPredicted RBP15.67■□□□□ 0.1
SGCE-204ENST00000428696 PIK3CAP42336 1068 aa15.67■□□□□ 0.1
SGCE-204ENST00000428696 CDR1P51861 262 aa15.67■□□□□ 0.1
SGCE-204ENST00000428696 YWHAHQ04917 246 aaPredicted RBP15.67■□□□□ 0.1
SGCE-204ENST00000428696 PPP3CAQ08209 521 aa15.67■□□□□ 0.1
SGCE-204ENST00000428696 CTXN3Q4LDR2 81 aa15.67■□□□□ 0.1
SGCE-204ENST00000428696 ANKS3Q6ZW76 656 aa15.67■□□□□ 0.1
SGCE-204ENST00000428696 FRMD5Q7Z6J6 570 aa15.67■□□□□ 0.1
SGCE-204ENST00000428696 KLHL5Q96PQ7 755 aa15.67■□□□□ 0.1
SGCE-204ENST00000428696 PLXNA4Q9HCM2 1894 aa15.66■□□□□ 0.1
SGCE-204ENST00000428696 H7C4K7 107 aa15.66■□□□□ 0.1
SGCE-204ENST00000428696 TEX28O15482 410 aa15.66■□□□□ 0.1
SGCE-204ENST00000428696 LINC01565O15544 149 aa15.66■□□□□ 0.1
SGCE-204ENST00000428696 CLASP2O75122 1294 aaKnown RBP15.66■□□□□ 0.1
SGCE-204ENST00000428696 OR1D2P34982 312 aa15.66■□□□□ 0.1
SGCE-204ENST00000428696 MTIF2P46199 727 aaKnown RBP15.66■□□□□ 0.1
SGCE-204ENST00000428696 NDUFV1P49821 464 aa15.66■□□□□ 0.1
SGCE-204ENST00000428696 TNNC1P63316 161 aa15.66■□□□□ 0.1
SGCE-204ENST00000428696 RBM10P98175 930 aaKnown RBP15.66■□□□□ 0.1
SGCE-204ENST00000428696 ZNF699Q32M78 642 aa15.66■□□□□ 0.1
SGCE-204ENST00000428696 WDR72Q3MJ13 1102 aa15.66■□□□□ 0.1
SGCE-204ENST00000428696 C1orf220Q5T0J3 134 aa15.66■□□□□ 0.1
SGCE-204ENST00000428696 WSCD1Q658N2 575 aa15.66■□□□□ 0.1
SGCE-204ENST00000428696 OVOS1Q6IE37 1185 aa15.66■□□□□ 0.1
SGCE-204ENST00000428696 PDXDC1Q6P996 788 aa15.66■□□□□ 0.1
SGCE-204ENST00000428696 C11orf57Q6ZUT1 292 aaPredicted RBP15.66■□□□□ 0.1
SGCE-204ENST00000428696 LRRC52Q8N7C0 313 aa15.66■□□□□ 0.1
SGCE-204ENST00000428696 LNX1Q8TBB1 728 aaPredicted RBP15.66■□□□□ 0.1
SGCE-204ENST00000428696 BORCS6Q96GS4 357 aa15.66■□□□□ 0.1
SGCE-204ENST00000428696 MED15Q96RN5 788 aa15.66■□□□□ 0.1
SGCE-204ENST00000428696 NAT10Q9H0A0 1025 aaKnown RBP15.66■□□□□ 0.1
SGCE-204ENST00000428696 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.66■□□□□ 0.1
SGCE-204ENST00000428696 ARHGEF37A1IGU5 675 aa15.65■□□□□ 0.1
SGCE-204ENST00000428696 PES1O00541 588 aaKnown RBP15.65■□□□□ 0.1
SGCE-204ENST00000428696 SYN3O14994 580 aa15.65■□□□□ 0.1
SGCE-204ENST00000428696 HLA-DRAP01903 254 aa15.65■□□□□ 0.1
SGCE-204ENST00000428696 ADH1AP07327 375 aa15.65■□□□□ 0.1
SGCE-204ENST00000428696 PAX3P23760 479 aa15.65■□□□□ 0.1
SGCE-204ENST00000428696 CLDN10P78369 228 aa15.65■□□□□ 0.1
SGCE-204ENST00000428696 CREMQ03060 361 aa15.65■□□□□ 0.1
SGCE-204ENST00000428696 CLUL1Q15846 466 aa15.65■□□□□ 0.1
SGCE-204ENST00000428696 DUSP6Q16828 381 aa15.65■□□□□ 0.1
SGCE-204ENST00000428696 ANO6Q4KMQ2 910 aa15.65■□□□□ 0.1
SGCE-204ENST00000428696 ZC3H3Q8IXZ2 948 aaKnown RBP15.65■□□□□ 0.1
SGCE-204ENST00000428696 RNF168Q8IYW5 571 aaPredicted RBP15.65■□□□□ 0.1
SGCE-204ENST00000428696 THEM5Q8N1Q8 247 aa15.65■□□□□ 0.1
SGCE-204ENST00000428696 CCDC150Q8NCX0 1101 aa15.65■□□□□ 0.1
SGCE-204ENST00000428696 PIK3R5Q8WYR1 880 aa15.65■□□□□ 0.1
SGCE-204ENST00000428696 CNOT6LQ96LI5 555 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms