RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.38□□□□□ -0.913e-6■■■■■ 50.8
CTNND1-208ENST00000428599 KRT35Q92764 455 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 MYCBPQ99417 103 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-208ENST00000428599 CD274Q9NZQ7 290 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 AGAP1Q9UPQ3 857 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 MAGEB2O15479 319 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 MAP3K13O43283 966 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 MFAP3LO75121 409 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 DDHD2O94830 711 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 KLRK1P26718 216 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 CASP1P29466 404 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 CYP2C19P33261 490 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 RFX5P48382 616 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-208ENST00000428599 COBLL1Q53SF7 1204 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 HS6ST3Q8IZP7 471 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 ICA1LQ8NDH6 482 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 ELMO2Q96JJ3 720 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 DARSP14868 501 aaKnown RBP9.38□□□□□ -0.91
CTNND1-208ENST00000428599 TWF1Q12792 350 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 C16orf86Q6ZW13 317 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 RNF180Q86T96 592 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 ZNF579Q8NAF0 562 aaKnown RBP9.38□□□□□ -0.91
CTNND1-208ENST00000428599 KRCC1Q9NPI7 259 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-208ENST00000428599 NOP53Q9NZM5 478 aaKnown RBP9.38□□□□□ -0.91
CTNND1-208ENST00000428599 RNASEH1O60930 286 aaKnown RBP9.38□□□□□ -0.91
CTNND1-208ENST00000428599 FTLP02792 175 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-208ENST00000428599 MLNP12872 115 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 SOAT1P35610 550 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 DRAP1Q14919 205 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-208ENST00000428599 EPHA7Q15375 998 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 P3H1Q32P28 736 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 LRRC23Q53EV4 343 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-208ENST00000428599 SCFD2Q8WU76 684 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 PABPC5Q96DU9 382 aaKnown RBP9.38□□□□□ -0.91
CTNND1-208ENST00000428599 PRPF18Q99633 342 aaKnown RBP9.38□□□□□ -0.91
CTNND1-208ENST00000428599 DEFB129Q9H1M3 183 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 RAD18Q9NS91 495 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 CAB39Q9Y376 341 aaPredicted RBP9.38□□□□□ -0.91
CTNND1-208ENST00000428599 PFASO15067 1338 aa9.38□□□□□ -0.91
CTNND1-208ENST00000428599 EEF2KO00418 725 aaKnown RBP9.37□□□□□ -0.91
CTNND1-208ENST00000428599 CYP2B6P20813 491 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 YWHABP31946 246 aaKnown RBP9.37□□□□□ -0.91
CTNND1-208ENST00000428599 RGS2P41220 211 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 OR1G1P47890 313 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 EIF3EP60228 445 aaKnown RBP9.37□□□□□ -0.91
CTNND1-208ENST00000428599 RARS2Q5T160 578 aaKnown RBP9.37□□□□□ -0.91
CTNND1-208ENST00000428599 ZNF438Q7Z4V0 828 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 CATSPER1Q8NEC5 780 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 VPS37AQ8NEZ2 397 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 CALML6Q8TD86 181 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 EIF2AK1Q9BQI3 630 aaKnown RBP9.37□□□□□ -0.91
CTNND1-208ENST00000428599 TEX13BQ9BXU2 312 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 NSMCE4AQ9NXX6 385 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 SLC25A13Q9UJS0 675 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 RRP15Q9Y3B9 282 aaKnown RBP9.37□□□□□ -0.91
CTNND1-208ENST00000428599 PCSK1P29120 753 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 GUCY1A2P33402 732 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 USP11P51784 963 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 FCGRTP55899 365 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 PTPRN2Q92932 1015 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 ATXN7L3BQ96GX2 97 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 NYAP2Q9P242 653 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 WDR35Q9P2L0 1181 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 STOML1Q9UBI4 398 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 AURKCQ9UQB9 309 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 SNX9Q9Y5X1 595 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 NDUFB5O43674 189 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 VCLP18206 1134 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 MZF1P28698 734 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-208ENST00000428599 SLC1A1P43005 524 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 CPT1AP50416 773 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 C10orf53Q8N6V4 93 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 KLHL11Q9NVR0 708 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 PP2D1A8MPX8 630 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 MYO1GB0I1T2 1018 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 KCNN4O15554 427 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 CLASP2O75122 1294 aaKnown RBP9.37□□□□□ -0.91
CTNND1-208ENST00000428599 CCDC159P0C7I6 412 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 CETPP11597 493 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 ALOX15P16050 662 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-208ENST00000428599 CUL3Q13618 768 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 WDR72Q3MJ13 1102 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 TSGA10IPQ3SY00 556 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 C6orf10Q5SRN2 563 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 FAM180AQ6UWF9 173 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 GAS2L3Q86XJ1 694 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 DDX42Q86XP3 938 aaKnown RBP eCLIP9.37□□□□□ -0.91
CTNND1-208ENST00000428599 AGBL3Q8NEM8 1001 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 FAM161BQ96MY7 647 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 GPR63Q9BZJ6 419 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 MTFR1LQ9H019 292 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-208ENST00000428599 HEATR9A2RTY3 570 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 GRID2IPA4D2P6 1211 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 ZNF500O60304 480 aaPredicted RBP9.37□□□□□ -0.91
CTNND1-208ENST00000428599 FKBP9O95302 570 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 ANXA11P50995 505 aaKnown RBP9.37□□□□□ -0.91
CTNND1-208ENST00000428599 PMS1P54277 932 aaKnown RBP9.37□□□□□ -0.91
CTNND1-208ENST00000428599 UBE3AQ05086 875 aa9.37□□□□□ -0.91
CTNND1-208ENST00000428599 KCNB1Q14721 858 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms