RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 B2RBV5 119 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 BOLA2-SMG1P6H3BVE0 249 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 CYTH3O43739 400 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 USP1O94782 785 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 CLPTM1O96005 669 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 KRT15P19012 456 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 PKN2Q16513 984 aaKnown RBP16.99■□□□□ 0.31
C9orf3-206ENST00000428313 MMEL1Q495T6 779 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 HYIQ5T013 277 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 PATL1Q86TB9 770 aaKnown RBP16.99■□□□□ 0.31
C9orf3-206ENST00000428313 PRUNE1Q86TP1 453 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 CEP70Q8NHQ1 597 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 PLVAPQ9BX97 442 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 TMEM120AQ9BXJ8 343 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 TUBA8Q9NY65 449 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-206ENST00000428313 TAS2R14Q9NYV8 317 aa16.99■□□□□ 0.31
C9orf3-206ENST00000428313 SMCO2A6NFE2 343 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 TSPY2A6NKD2 308 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 USP17L12C9JPN9 530 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 USP17L21D6R901 530 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 CALUO43852 315 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-206ENST00000428313 PGM3O95394 542 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 LPIN1Q14693 890 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 DRAP1Q14919 205 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-206ENST00000428313 TMEM53Q6P2H8 277 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 KIF6Q6ZMV9 814 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 C4orf33Q8N1A6 199 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 ATP11CQ8NB49 1132 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 PRR11Q96HE9 360 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-206ENST00000428313 CYTH2Q99418 400 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 VPS11Q9H270 941 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 KCNK13Q9HB14 408 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 EFR3BQ9Y2G0 817 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 SPATA31A1Q5TZJ5 1347 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 KDM3AQ9Y4C1 1321 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 SH3PXD2BA1X283 911 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 FCHO1O14526 889 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 PEX1O43933 1283 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 CSDE1O75534 798 aaKnown RBP16.98■□□□□ 0.31
C9orf3-206ENST00000428313 CAMTA2O94983 1202 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 IL1BP01584 269 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 DLATP10515 647 aaKnown RBP16.98■□□□□ 0.31
C9orf3-206ENST00000428313 MAGEA4P43358 317 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 GPC5P78333 572 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 KIF22Q14807 665 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 NADK2Q4G0N4 442 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 C1orf146Q5VVC0 180 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 RFX8Q6ZV50 586 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 NOP9Q86U38 636 aaKnown RBP16.98■□□□□ 0.31
C9orf3-206ENST00000428313 SYNE4Q8N205 404 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 MARVELD2Q8N4S9 558 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 ZNF276Q8N554 614 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 PLEKHO2Q8TD55 490 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 MTBPQ96DY7 904 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 OXNAD1Q96HP4 312 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-206ENST00000428313 C9orf72Q96LT7 481 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 HNRNPABQ99729 332 aaKnown RBP16.98■□□□□ 0.31
C9orf3-206ENST00000428313 UBA5Q9GZZ9 404 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 FBXO6Q9NRD1 293 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-206ENST00000428313 SLC7A8Q9UHI5 535 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 SAP30BPQ9UHR5 308 aaKnown RBP16.98■□□□□ 0.31
C9orf3-206ENST00000428313 POLIQ9UNA4 740 aa16.98■□□□□ 0.31
C9orf3-206ENST00000428313 GSTTP1A0A1W2PQM5 241 aa16.97■□□□□ 0.31
C9orf3-206ENST00000428313 TMEM110-MUSTN1A8MSY1 372 aa16.97■□□□□ 0.31
C9orf3-206ENST00000428313 PDXKO00764 312 aa16.97■□□□□ 0.31
C9orf3-206ENST00000428313 IRX4P78413 519 aa16.97■□□□□ 0.31
C9orf3-206ENST00000428313 DLG1Q12959 904 aa16.97■□□□□ 0.31
C9orf3-206ENST00000428313 ANKS1BQ7Z6G8 1248 aa16.97■□□□□ 0.31
C9orf3-206ENST00000428313 ERMNQ8TAM6 284 aa16.97■□□□□ 0.31
C9orf3-206ENST00000428313 BHMT2Q9H2M3 363 aa16.97■□□□□ 0.31
C9orf3-206ENST00000428313 SLC24A2Q9UI40 661 aa16.97■□□□□ 0.31
C9orf3-206ENST00000428313 KIAA1551Q9HCM1 1747 aa16.97■□□□□ 0.31
C9orf3-206ENST00000428313 SLC26A4O43511 780 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 SERPINB7O75635 380 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 TRMUO75648 421 aaKnown RBP16.96■□□□□ 0.31
C9orf3-206ENST00000428313 AKAP3O75969 853 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 ADCY8P40145 1251 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 PIK3CAP42336 1068 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 AQP4P55087 323 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 PPIDQ08752 370 aaKnown RBP16.96■□□□□ 0.31
C9orf3-206ENST00000428313 OVGP1Q12889 678 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 ECM1Q16610 540 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 KNOP1Q1ED39 458 aaKnown RBP16.96■□□□□ 0.31
C9orf3-206ENST00000428313 OLFML1Q6UWY5 402 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 TREML1Q86YW5 311 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 ZFP28Q8NHY6 868 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 HSPBAP1Q96EW2 488 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 VPS50Q96JG6 964 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 TSSK1BQ9BXA7 367 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 GPR88Q9GZN0 384 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 MANSC1Q9H8J5 431 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 ZNF180Q9UJW8 692 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 DNAJC12Q9UKB3 198 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 NHSL1Q5SYE7 1610 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 CCDC160A6NGH7 325 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 CAPN14A8MX76 684 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 POTECB2RU33 542 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 H3BRJ5 948 aa16.96■□□□□ 0.31
C9orf3-206ENST00000428313 DENRO43583 198 aaKnown RBP16.96■□□□□ 0.31
C9orf3-206ENST00000428313 PDE8AO60658 829 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms