RNA–Protein interactions for RNA: ENST00000428017.5

VARS2-203, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 1,103 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-203ENST00000428017 TTPALQ9BTX7 342 aa16.3■□□□□ 0.2
VARS2-203ENST00000428017 HERC2P3Q9BVR0 1158 aa16.3■□□□□ 0.2
VARS2-203ENST00000428017 GPR62Q9BZJ7 368 aa16.3■□□□□ 0.2
VARS2-203ENST00000428017 SSX2IPQ9Y2D8 614 aa16.3■□□□□ 0.2
VARS2-203ENST00000428017 RALGAPA2Q2PPJ7 1873 aa16.3■□□□□ 0.2
VARS2-203ENST00000428017 CITO14578 2027 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 EPOPA6NHQ4 379 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 SYN3O14994 580 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 HLA-DRAP01903 254 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 P4HA1P13674 534 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 GLUD2P49448 558 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 FXR1P51114 621 aaKnown RBP eCLIP16.29■□□□□ 0.2
VARS2-203ENST00000428017 MYL6P60660 151 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 TNNC1P63316 161 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 NCAPHQ15003 741 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 TIGD5Q53EQ6 642 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 WDR44Q5JSH3 913 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 PDE12Q6L8Q7 609 aaKnown RBP16.29■□□□□ 0.2
VARS2-203ENST00000428017 PDXDC1Q6P996 788 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.29■□□□□ 0.2
VARS2-203ENST00000428017 C15orf39Q6ZRI6 1047 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 METTL23Q86XA0 190 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 DEFB123Q8N688 67 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 TAS1R2Q8TE23 839 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 TAF4BQ92750 862 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 SUSD3Q96L08 255 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 SENP8Q96LD8 212 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 TUBGCP2Q9BSJ2 902 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 NGRNQ9NPE2 291 aaKnown RBP16.29■□□□□ 0.2
VARS2-203ENST00000428017 MRPL17Q9NRX2 175 aaKnown RBP16.29■□□□□ 0.2
VARS2-203ENST00000428017 PCDHB8Q9UN66 801 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 SNX9Q9Y5X1 595 aa16.29■□□□□ 0.2
VARS2-203ENST00000428017 CYB561D2O14569 222 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 SPTLC1O15269 473 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 P4HA2O15460 535 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 HUS1O60921 280 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 CST3P01034 146 aaPredicted RBP16.28■□□□□ 0.2
VARS2-203ENST00000428017 IGFBP4P22692 258 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 IGFBP6P24592 240 aaPredicted RBP16.28■□□□□ 0.2
VARS2-203ENST00000428017 AARSP49588 968 aaKnown RBP eCLIP16.28■□□□□ 0.2
VARS2-203ENST00000428017 SMC1AQ14683 1233 aaKnown RBP16.28■□□□□ 0.2
VARS2-203ENST00000428017 IQCB1Q15051 598 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 WDR72Q3MJ13 1102 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 CBWD6Q4V339 395 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 VWA3BQ502W6 1294 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 ZNF667Q5HYK9 610 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 CBWD3Q5JTY5 395 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 CBWD5Q5RIA9 395 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 CD300LGQ6UXG3 332 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 LUZP1Q86V48 1076 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 CXorf38Q8TB03 319 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 MRPL38Q96DV4 380 aaKnown RBP16.28■□□□□ 0.2
VARS2-203ENST00000428017 VN1R3Q9BXE9 311 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 ZBP1Q9H171 429 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 RAB20Q9NX57 234 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 TAB2Q9NYJ8 693 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 NXF1Q9UBU9 619 aaKnown RBP16.28■□□□□ 0.2
VARS2-203ENST00000428017 DSEQ9UL01 958 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 GBF1Q92538 1859 aa16.28■□□□□ 0.2
VARS2-203ENST00000428017 TDRD15B5MCY1 1934 aaKnown RBP16.27■□□□□ 0.2
VARS2-203ENST00000428017 M0QZQ0 153 aa16.27■□□□□ 0.2
VARS2-203ENST00000428017 C2CD2LO14523 706 aa16.27■□□□□ 0.2
VARS2-203ENST00000428017 VNN1O95497 513 aa16.27■□□□□ 0.2
VARS2-203ENST00000428017 CXCL14O95715 111 aa16.27■□□□□ 0.2
VARS2-203ENST00000428017 STAU1O95793 577 aaKnown RBP16.27■□□□□ 0.2
VARS2-203ENST00000428017 CTSAP10619 480 aa16.27■□□□□ 0.2
VARS2-203ENST00000428017 FGFR3P22607 806 aa16.27■□□□□ 0.2
VARS2-203ENST00000428017 TKTP29401 623 aaKnown RBP16.27■□□□□ 0.2
VARS2-203ENST00000428017 CREMQ03060 361 aa16.27■□□□□ 0.2
VARS2-203ENST00000428017 KRT31Q15323 416 aa16.27■□□□□ 0.2
VARS2-203ENST00000428017 PLPP4Q5VZY2 271 aa16.27■□□□□ 0.2
VARS2-203ENST00000428017 Q7L0L9 218 aa16.27■□□□□ 0.2
VARS2-203ENST00000428017 TAS1R1Q7RTX1 841 aa16.27■□□□□ 0.2
VARS2-203ENST00000428017 RIN2Q8WYP3 895 aaPredicted RBP16.27■□□□□ 0.2
VARS2-203ENST00000428017 PPP2R3CQ969Q6 453 aa16.27■□□□□ 0.2
VARS2-203ENST00000428017 B3GALT6Q96L58 329 aa16.27■□□□□ 0.2
VARS2-203ENST00000428017 MMS19Q96T76 1030 aa16.27■□□□□ 0.2
VARS2-203ENST00000428017 NDST4Q9H3R1 872 aa16.27■□□□□ 0.2
VARS2-203ENST00000428017 GDAP2Q9NXN4 497 aa16.27■□□□□ 0.2
VARS2-203ENST00000428017 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.26■□□□□ 0.19
VARS2-203ENST00000428017 H7C4K7 107 aa16.26■□□□□ 0.19
VARS2-203ENST00000428017 PMM2O15305 246 aa16.26■□□□□ 0.19
VARS2-203ENST00000428017 ASS1P00966 412 aaKnown RBP16.26■□□□□ 0.19
VARS2-203ENST00000428017 ZNF18P17022 549 aa16.26■□□□□ 0.19
VARS2-203ENST00000428017 TYMPP19971 482 aa16.26■□□□□ 0.19
VARS2-203ENST00000428017 DNAJB1P25685 340 aa16.26■□□□□ 0.19
VARS2-203ENST00000428017 ERVFC1P60507 584 aa16.26■□□□□ 0.19
VARS2-203ENST00000428017 DSG1Q02413 1049 aa16.26■□□□□ 0.19
VARS2-203ENST00000428017 YWHAHQ04917 246 aaPredicted RBP16.26■□□□□ 0.19
VARS2-203ENST00000428017 FKBP15Q5T1M5 1219 aa16.26■□□□□ 0.19
VARS2-203ENST00000428017 ANKS3Q6ZW76 656 aa16.26■□□□□ 0.19
VARS2-203ENST00000428017 RNF168Q8IYW5 571 aaPredicted RBP16.26■□□□□ 0.19
VARS2-203ENST00000428017 TOP6BLQ8N6T0 577 aa16.26■□□□□ 0.19
VARS2-203ENST00000428017 PI4K2AQ9BTU6 479 aa16.26■□□□□ 0.19
VARS2-203ENST00000428017 EMILIN2Q9BXX0 1053 aa16.26■□□□□ 0.19
VARS2-203ENST00000428017 XYLT2Q9H1B5 865 aa16.26■□□□□ 0.19
VARS2-203ENST00000428017 VPS16Q9H269 839 aa16.26■□□□□ 0.19
VARS2-203ENST00000428017 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.26■□□□□ 0.195e-7■■■■■ 26.9
VARS2-203ENST00000428017 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.26■□□□□ 0.19
VARS2-203ENST00000428017 CHST7Q9NS84 486 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms