RNA–Protein interactions for RNA: ENST00000427239.5

COL11A1-204, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 1,709 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-204ENST00000427239 ARHGEF37A1IGU5 675 aa16.56■□□□□ 0.24
COL11A1-204ENST00000427239 FSD2A1L4K1 749 aa16.56■□□□□ 0.24
COL11A1-204ENST00000427239 NT5C1B-RDH14C9J2C7 533 aa16.56■□□□□ 0.24
COL11A1-204ENST00000427239 TEX33O43247 280 aa16.56■□□□□ 0.24
COL11A1-204ENST00000427239 KRT17Q04695 432 aa16.56■□□□□ 0.24
COL11A1-204ENST00000427239 KCNMA1Q12791 1236 aa16.56■□□□□ 0.24
COL11A1-204ENST00000427239 GSE1Q14687 1217 aa16.56■□□□□ 0.24
COL11A1-204ENST00000427239 ZNF667Q5HYK9 610 aa16.56■□□□□ 0.24
COL11A1-204ENST00000427239 TRIM65Q6PJ69 517 aa16.56■□□□□ 0.24
COL11A1-204ENST00000427239 CD300LGQ6UXG3 332 aa16.56■□□□□ 0.24
COL11A1-204ENST00000427239 DPH6Q7L8W6 267 aa16.56■□□□□ 0.24
COL11A1-204ENST00000427239 SLC39A11Q8N1S5 342 aa16.56■□□□□ 0.24
COL11A1-204ENST00000427239 TMEM130Q8N3G9 435 aa16.56■□□□□ 0.24
COL11A1-204ENST00000427239 TMEM169Q96HH4 297 aa16.56■□□□□ 0.24
COL11A1-204ENST00000427239 FAM81BQ96LP2 452 aa16.56■□□□□ 0.24
COL11A1-204ENST00000427239 XPO4Q9C0E2 1151 aaKnown RBP16.56■□□□□ 0.24
COL11A1-204ENST00000427239 INTS2Q9H0H0 1204 aaKnown RBP16.56■□□□□ 0.24
COL11A1-204ENST00000427239 SLC28A3Q9HAS3 691 aa16.56■□□□□ 0.24
COL11A1-204ENST00000427239 RB1P06400 928 aa16.55■□□□□ 0.24
COL11A1-204ENST00000427239 SLC9A1P19634 815 aa16.55■□□□□ 0.24
COL11A1-204ENST00000427239 PBX2P40425 430 aa16.55■□□□□ 0.24
COL11A1-204ENST00000427239 PBX3P40426 434 aa16.55■□□□□ 0.24
COL11A1-204ENST00000427239 NOP14P78316 857 aaKnown RBP16.55■□□□□ 0.24
COL11A1-204ENST00000427239 NT5C1BQ96P26 610 aa16.55■□□□□ 0.24
COL11A1-204ENST00000427239 TGS1Q96RS0 853 aaKnown RBP16.55■□□□□ 0.24
COL11A1-204ENST00000427239 PI4K2AQ9BTU6 479 aa16.55■□□□□ 0.24
COL11A1-204ENST00000427239 PLCB1Q9NQ66 1216 aa16.55■□□□□ 0.24
COL11A1-204ENST00000427239 YBX2Q9Y2T7 364 aaKnown RBP16.55■□□□□ 0.24
COL11A1-204ENST00000427239 CHD7Q9P2D1 2997 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 SF3B1O75533 1304 aaKnown RBP eCLIP16.54■□□□□ 0.24
COL11A1-204ENST00000427239 C5orf67F2Z3F1 127 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 M0QZQ0 153 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 SPTLC1O15269 473 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 CLSTN1O94985 981 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 ITGB1P05556 798 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 FAM163BP0C2L3 166 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 TNNC1P63316 161 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 PLCB3Q01970 1234 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 TAP1Q03518 808 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 SYCP1Q15431 976 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 TIGD5Q53EQ6 642 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 DSTYKQ6XUX3 929 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 SUSD3Q96L08 255 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 SENP8Q96LD8 212 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 FAM124BQ9H5Z6 455 aaPredicted RBP16.54■□□□□ 0.24
COL11A1-204ENST00000427239 GRPEL1Q9HAV7 217 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 MARCH5Q9NX47 278 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 NXF1Q9UBU9 619 aaKnown RBP16.54■□□□□ 0.24
COL11A1-204ENST00000427239 APEX2Q9UBZ4 518 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 SIK3Q9Y2K2 1263 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 SNX9Q9Y5X1 595 aa16.54■□□□□ 0.24
COL11A1-204ENST00000427239 F8W810 466 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 CYB561D2O14569 222 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 HUS1O60921 280 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 LRRN2O75325 713 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 IGFBP6P24592 240 aaPredicted RBP16.53■□□□□ 0.24
COL11A1-204ENST00000427239 ERVK-21P61565 698 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 GCNT1Q02742 428 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 HASPINQ8TF76 798 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 PCMTD1Q96MG8 357 aaPredicted RBP16.53■□□□□ 0.24
COL11A1-204ENST00000427239 MMS19Q96T76 1030 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 PUF60Q9UHX1 559 aaKnown RBP16.53■□□□□ 0.24
COL11A1-204ENST00000427239 DSEQ9UL01 958 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 DAAM1Q9Y4D1 1078 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 AP5Z1O43299 807 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 FGF18O76093 207 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 EFEMP2O95967 443 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 ODC1P11926 461 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 TBXAS1P24557 533 aaPredicted RBP16.53■□□□□ 0.24
COL11A1-204ENST00000427239 DNAJB2P25686 324 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 CTNNB1P35222 781 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 MRE11P49959 708 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 KLHDC7AQ5VTJ3 777 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 SMYD5Q6GMV2 418 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 SPOPLQ6IQ16 392 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 PHLDB3Q6NSJ2 640 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 FUT10Q6P4F1 479 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 ENOSF1Q7L5Y1 443 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 LIMS2Q7Z4I7 341 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 DDX53Q86TM3 631 aaKnown RBP16.53■□□□□ 0.24
COL11A1-204ENST00000427239 TMEM173Q86WV6 379 aaPredicted RBP16.53■□□□□ 0.24
COL11A1-204ENST00000427239 TMEM86AQ8N2M4 240 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 TOP6BLQ8N6T0 577 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 KLHL23Q8NBE8 558 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 APPL2Q8NEU8 664 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 TATDN2Q93075 761 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 JAKMIP2Q96AA8 810 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 MRFAP1L1Q96HT8 127 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 C11orf84Q9BUA3 381 aaPredicted RBP16.53■□□□□ 0.24
COL11A1-204ENST00000427239 GPR62Q9BZJ7 368 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 NIF3L1Q9GZT8 377 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 CYP3A43Q9HB55 503 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 APOBEC3GQ9HC16 384 aaKnown RBP16.53■□□□□ 0.24
COL11A1-204ENST00000427239 FBXL5Q9UKA1 691 aa16.53■□□□□ 0.24
COL11A1-204ENST00000427239 SYN3O14994 580 aa16.52■□□□□ 0.24
COL11A1-204ENST00000427239 RFX1P22670 979 aa16.52■□□□□ 0.24
COL11A1-204ENST00000427239 PBX1P40424 430 aa16.52■□□□□ 0.24
COL11A1-204ENST00000427239 BRCC3P46736 316 aa16.52■□□□□ 0.24
COL11A1-204ENST00000427239 LRMPQ12912 555 aa16.52■□□□□ 0.24
COL11A1-204ENST00000427239 PPP2R2DQ66LE6 453 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms