RNA–Protein interactions for RNA: ENST00000426886.1

SMIM12-203, Transcript of small integral membrane protein 12, humanhuman

TSL 1 (best)

Gene SMIM12, Length 2,618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12-203ENST00000426886 PSMC2P35998 433 aaKnown RBP13.52□□□□□ -0.24
SMIM12-203ENST00000426886 VARS2Q5ST30 1063 aaKnown RBP13.52□□□□□ -0.24
SMIM12-203ENST00000426886 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.52□□□□□ -0.24
SMIM12-203ENST00000426886 NT5DC4Q86YG4 428 aa13.52□□□□□ -0.24
SMIM12-203ENST00000426886 CREBRFQ8IUR6 639 aa13.52□□□□□ -0.24
SMIM12-203ENST00000426886 WDR49Q8IV35 697 aa13.52□□□□□ -0.24
SMIM12-203ENST00000426886 PABPC5Q96DU9 382 aaKnown RBP13.52□□□□□ -0.24
SMIM12-203ENST00000426886 DHTKD1Q96HY7 919 aaPredicted RBP13.52□□□□□ -0.24
SMIM12-203ENST00000426886 SUSD3Q96L08 255 aa13.52□□□□□ -0.24
SMIM12-203ENST00000426886 SENP8Q96LD8 212 aa13.52□□□□□ -0.24
SMIM12-203ENST00000426886 TSPAN18Q96SJ8 248 aa13.52□□□□□ -0.24
SMIM12-203ENST00000426886 CGRRF1Q99675 332 aa13.52□□□□□ -0.24
SMIM12-203ENST00000426886 STK39Q9UEW8 545 aa13.52□□□□□ -0.24
SMIM12-203ENST00000426886 IRAK3Q9Y616 596 aa13.52□□□□□ -0.24
SMIM12-203ENST00000426886 PHACTR2O75167 634 aa13.52□□□□□ -0.25
SMIM12-203ENST00000426886 LTBRP36941 435 aa13.52□□□□□ -0.25
SMIM12-203ENST00000426886 TAF6P49848 677 aa13.52□□□□□ -0.25
SMIM12-203ENST00000426886 FKBP3Q00688 224 aaKnown RBP13.52□□□□□ -0.25
SMIM12-203ENST00000426886 BFSP1Q12934 665 aa13.52□□□□□ -0.25
SMIM12-203ENST00000426886 ADAM15Q13444 863 aa13.52□□□□□ -0.25
SMIM12-203ENST00000426886 EDRF1Q3B7T1 1238 aa13.52□□□□□ -0.25
SMIM12-203ENST00000426886 COBLL1Q53SF7 1204 aa13.52□□□□□ -0.25
SMIM12-203ENST00000426886 RSPO2Q6UXX9 243 aaPredicted RBP13.52□□□□□ -0.25
SMIM12-203ENST00000426886 EFHBQ8N7U6 833 aa13.52□□□□□ -0.25
SMIM12-203ENST00000426886 CDY1Q9Y6F8 540 aa13.52□□□□□ -0.25
SMIM12-203ENST00000426886 TBX10O75333 385 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 TPM2P07951 284 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 OR1D2P34982 312 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 RBP5P82980 135 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 PAK1Q13153 545 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 DPCR1Q3MIW9 517 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 USP37Q86T82 979 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 C12orf76Q8N812 135 aaPredicted RBP13.51□□□□□ -0.25
SMIM12-203ENST00000426886 TRIML1Q8N9V2 468 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 CLSTN3Q9BQT9 956 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 GTPBP4Q9BZE4 634 aaKnown RBP13.51□□□□□ -0.25
SMIM12-203ENST00000426886 ITGA11Q9UKX5 1188 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 SSX2IPQ9Y2D8 614 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 KPNA7A9QM74 516 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 CYB561D2O14569 222 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 MBD3O95983 291 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 KRT13P13646 458 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 VAMP7P51809 220 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 MYBPC2Q14324 1141 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 TCERG1LQ5VWI1 586 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 PIK3R5Q8WYR1 880 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 THEGQ9P2T0 379 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 SNX9Q9Y5X1 595 aa13.51□□□□□ -0.25
SMIM12-203ENST00000426886 ADH1AP07327 375 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 EPB41P11171 864 aaKnown RBP13.5□□□□□ -0.25
SMIM12-203ENST00000426886 GCLMP48507 274 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 KCNQ1P51787 676 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 YWHAHQ04917 246 aaPredicted RBP13.5□□□□□ -0.25
SMIM12-203ENST00000426886 LRRC63Q05C16 580 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 TRPC3Q13507 836 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 CTC1Q2NKJ3 1217 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 CTXN3Q4LDR2 81 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 DCAF17Q5H9S7 520 aaPredicted RBP13.5□□□□□ -0.25
SMIM12-203ENST00000426886 CAVIN1Q6NZI2 390 aaKnown RBP13.5□□□□□ -0.25
SMIM12-203ENST00000426886 CXorf38Q8TB03 319 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 FEZF2Q8TBJ5 459 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 HPDLQ96IR7 371 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 DUSP9Q99956 384 aaKnown RBP13.5□□□□□ -0.25
SMIM12-203ENST00000426886 CLEC1BQ9P126 229 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 TMEM63CQ9P1W3 806 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 CDH22Q9UJ99 828 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 TGM5O43548 720 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 CLCN4P51793 760 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 NFIL3Q16649 462 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 TDRD10Q5VZ19 366 aaKnown RBP13.5□□□□□ -0.25
SMIM12-203ENST00000426886 TTI2Q6NXR4 508 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 ANKS3Q6ZW76 656 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.5□□□□□ -0.25
SMIM12-203ENST00000426886 APPL2Q8NEU8 664 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 SRRTQ9BXP5 876 aaKnown RBP13.5□□□□□ -0.25
SMIM12-203ENST00000426886 RXFP1Q9HBX9 757 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 PCDHB8Q9UN66 801 aa13.5□□□□□ -0.25
SMIM12-203ENST00000426886 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.49□□□□□ -0.25
SMIM12-203ENST00000426886 M0QZQ0 153 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 SYN3O14994 580 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 WEE2P0C1S8 567 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 OR4Q2P0C623 313 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 MYL6P60660 151 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 SV2CQ496J9 727 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 WSCD1Q658N2 575 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 INTS8Q75QN2 995 aaKnown RBP13.49□□□□□ -0.25
SMIM12-203ENST00000426886 TMEM174Q8WUU8 243 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 BORCS6Q96GS4 357 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 ZNF560Q96MR9 790 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 MMS19Q96T76 1030 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 CDCA3Q99618 268 aaPredicted RBP13.49□□□□□ -0.25
SMIM12-203ENST00000426886 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.49□□□□□ -0.25
SMIM12-203ENST00000426886 SCN1AP35498 2009 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 ATG2AQ2TAZ0 1938 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 ANK1P16157 1881 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 NCK2O43639 380 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 GLUD1P00367 558 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 PPP1R2P41236 205 aa13.49□□□□□ -0.25
SMIM12-203ENST00000426886 AARSP49588 968 aaKnown RBP eCLIP13.49□□□□□ -0.25
SMIM12-203ENST00000426886 PPP3CAQ08209 521 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms