RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 LRRC43Q8N309 656 aa8.05□□□□□ -1.12
LINC01049-201ENST00000426840 GPD1LQ8N335 351 aa8.05□□□□□ -1.12
LINC01049-201ENST00000426840 PHTF2Q8N3S3 785 aa8.05□□□□□ -1.12
LINC01049-201ENST00000426840 XXYLT1Q8NBI6 393 aa8.05□□□□□ -1.12
LINC01049-201ENST00000426840 GOLGA5Q8TBA6 731 aa8.05□□□□□ -1.12
LINC01049-201ENST00000426840 ARNTL2Q8WYA1 636 aa8.05□□□□□ -1.12
LINC01049-201ENST00000426840 P2RX5Q93086 422 aa8.05□□□□□ -1.12
LINC01049-201ENST00000426840 DHTKD1Q96HY7 919 aaPredicted RBP8.05□□□□□ -1.12
LINC01049-201ENST00000426840 RPS6KC1Q96S38 1066 aa8.05□□□□□ -1.12
LINC01049-201ENST00000426840 PAAF1Q9BRP4 392 aa8.05□□□□□ -1.12
LINC01049-201ENST00000426840 TMEM175Q9BSA9 504 aa8.05□□□□□ -1.12
LINC01049-201ENST00000426840 ASB7Q9H672 318 aa8.05□□□□□ -1.12
LINC01049-201ENST00000426840 KIAA1586Q9HCI6 787 aa8.05□□□□□ -1.12
LINC01049-201ENST00000426840 TOPORSQ9NS56 1045 aaPredicted RBP8.05□□□□□ -1.12
LINC01049-201ENST00000426840 TMEM63CQ9P1W3 806 aa8.05□□□□□ -1.12
LINC01049-201ENST00000426840 FAN1Q9Y2M0 1017 aa8.05□□□□□ -1.12
LINC01049-201ENST00000426840 TDRD15B5MCY1 1934 aaKnown RBP8.04□□□□□ -1.12
LINC01049-201ENST00000426840 ZNF233A6NK53 670 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 H3BNC9 293 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 GRM6O15303 877 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 CALUO43852 315 aaPredicted RBP8.04□□□□□ -1.12
LINC01049-201ENST00000426840 LPXNO60711 386 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 EFEMP2O95967 443 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 NR3C1P04150 777 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 ITGB1P05556 798 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 CCNE1P24864 410 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 DNAJB1P25685 340 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 CTNNB1P35222 781 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 SOX11P35716 441 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 PBX3P40426 434 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 PPP1R2P41236 205 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 ALDH7A1P49419 539 aaKnown RBP8.04□□□□□ -1.12
LINC01049-201ENST00000426840 CASP4P49662 377 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 CYP2J2P51589 502 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 PLCB3Q01970 1234 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 SPAG1Q07617 926 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 TUSC3Q13454 348 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 GPM6BQ13491 265 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 CAMK1Q14012 370 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 ADGRE1Q14246 886 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 JADE1Q6IE81 842 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 BRSK2Q8IWQ3 736 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 ZC3H3Q8IXZ2 948 aaKnown RBP8.04□□□□□ -1.12
LINC01049-201ENST00000426840 TMEM130Q8N3G9 435 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 KLHL23Q8NBE8 558 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 SPPL3Q8TCT6 385 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 PLEKHO2Q8TD55 490 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 BCL7CQ8WUZ0 217 aaPredicted RBP8.04□□□□□ -1.12
LINC01049-201ENST00000426840 RABGGTAQ92696 567 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 C18orf25Q96B23 403 aaPredicted RBP8.04□□□□□ -1.12
LINC01049-201ENST00000426840 MFSD14AQ96MC6 490 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 FAM161BQ96MY7 647 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 ZNF558Q96NG5 402 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 FAM193BQ96PV7 902 aaPredicted RBP8.04□□□□□ -1.12
LINC01049-201ENST00000426840 MED15Q96RN5 788 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 TSPAN18Q96SJ8 248 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 DUSP9Q99956 384 aaKnown RBP8.04□□□□□ -1.12
LINC01049-201ENST00000426840 PLVAPQ9BX97 442 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 GZF1Q9H116 711 aaPredicted RBP8.04□□□□□ -1.12
LINC01049-201ENST00000426840 PRDM12Q9H4Q4 367 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 PDE11AQ9HCR9 933 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 RAB6BQ9NRW1 208 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 MTMR10Q9NXD2 777 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 SPG21Q9NZD8 308 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 CACNG4Q9UBN1 327 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 MTUS1Q9ULD2 1270 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 RWDD3Q9Y3V2 267 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 PCDHB12Q9Y5F1 795 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 ANK1P16157 1881 aa8.04□□□□□ -1.12
LINC01049-201ENST00000426840 KIAA1671Q9BY89 1806 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 NLRC5Q86WI3 1866 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 A0A1W2PRU2 124 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 TRIM49BA6NDI0 452 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 F8W810 466 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 EXOC3O60645 756 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 ZC3H11AO75152 810 aaKnown RBP eCLIP8.03□□□□□ -1.12
LINC01049-201ENST00000426840 AKAP3O75969 853 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 FGF18O76093 207 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 IL18RAPO95256 599 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 POU3F3P20264 500 aaPredicted RBP8.03□□□□□ -1.12
LINC01049-201ENST00000426840 CYP3A5P20815 502 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 OR1G1P47890 313 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 NLRP12P59046 1061 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 PPP2R3AQ06190 1150 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 CYP24A1Q07973 514 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 ADAM9Q13443 819 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 PSMD6Q15008 389 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 SNRNP35Q16560 246 aaKnown RBP8.03□□□□□ -1.12
LINC01049-201ENST00000426840 KLHL40Q2TBA0 621 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 EDRF1Q3B7T1 1238 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 CCDC183Q5T5S1 534 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 SPATA1Q5VX52 437 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 SCARA3Q6AZY7 606 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 TTI2Q6NXR4 508 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 DCLRE1AQ6PJP8 1040 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 FOXR2Q6PJQ5 311 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 CYP2U1Q7Z449 544 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 TMEM173Q86WV6 379 aaPredicted RBP8.03□□□□□ -1.12
LINC01049-201ENST00000426840 EFCAB13Q8IY85 973 aa8.03□□□□□ -1.12
LINC01049-201ENST00000426840 DEFB123Q8N688 67 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms