RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 NOD1Q9Y239 953 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 GRID2IPA4D2P6 1211 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 MAP3K13O43283 966 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 SNX3O60493 162 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 SUPT3HO75486 399 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 ATP6V1C1P21283 382 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 SH3D19Q5HYK7 790 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 SH2D4BQ5SQS7 431 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 PLEKHH3Q7Z736 793 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 IRF2BP1Q8IU81 584 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 CCDC60Q8IWA6 550 aaPredicted RBP16.92■□□□□ 0.3
PKP4-205ENST00000426248 PACSIN1Q9BY11 444 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 PITPNM3Q9BZ71 974 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 ZFYVE28Q9HCC9 887 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 ZNF232Q9UNY5 417 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 PTPN22Q9Y2R2 807 aa16.92■□□□□ 0.3
PKP4-205ENST00000426248 EPHB6O15197 1021 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 HNRNPRO43390 633 aaKnown RBP16.91■□□□□ 0.3
PKP4-205ENST00000426248 CCNE2O96020 404 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 BCRP11274 1271 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 ASIC2Q16515 512 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 UGCGQ16739 394 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 TMC3Q7Z5M5 1100 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 CEP70Q8NHQ1 597 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 PPP1R13LQ8WUF5 828 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 BRI3BPQ8WY22 251 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 USP20Q9Y2K6 914 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 COG7P83436 770 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 KCNH2Q12809 1159 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 SPRYD7Q5W111 196 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 ARMCX2Q7L311 632 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 DPH6Q7L8W6 267 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 SEL1LQ9UBV2 794 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 MYH4Q9Y623 1939 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 DGAT1O75907 488 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 UBA1P22314 1058 aaKnown RBP16.91■□□□□ 0.3
PKP4-205ENST00000426248 HOXA7P31268 230 aaPredicted RBP16.91■□□□□ 0.3
PKP4-205ENST00000426248 FSTL1Q12841 308 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 TTC8Q8TAM2 541 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 STK32AQ8WU08 396 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 HAUS1Q96CS2 278 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 FGFBP2Q9BYJ0 223 aa16.91■□□□□ 0.3
PKP4-205ENST00000426248 STAM2O75886 525 aa16.9■□□□□ 0.3
PKP4-205ENST00000426248 AFPP02771 609 aaKnown RBP16.9■□□□□ 0.3
PKP4-205ENST00000426248 OATP04181 439 aa16.9■□□□□ 0.3
PKP4-205ENST00000426248 SUPT20HL2P0C7V6 817 aa16.9■□□□□ 0.3
PKP4-205ENST00000426248 ARSHQ5FYA8 562 aa16.9■□□□□ 0.3
PKP4-205ENST00000426248 NIPA1Q7RTP0 329 aa16.9■□□□□ 0.3
PKP4-205ENST00000426248 SPC25Q9HBM1 224 aa16.9■□□□□ 0.3
PKP4-205ENST00000426248 MAP3K7O43318 606 aa16.9■□□□□ 0.3
PKP4-205ENST00000426248 C6orf118Q5T5N4 469 aa16.9■□□□□ 0.3
PKP4-205ENST00000426248 INPP4AQ96PE3 977 aaPredicted RBP16.9■□□□□ 0.3
PKP4-205ENST00000426248 PDGFCQ9NRA1 345 aa16.9■□□□□ 0.3
PKP4-205ENST00000426248 MYH10P35580 1976 aa16.9■□□□□ 0.3
PKP4-205ENST00000426248 NPTXRO95502 500 aa16.9■□□□□ 0.3
PKP4-205ENST00000426248 ABCB4P21439 1286 aa16.9■□□□□ 0.3
PKP4-205ENST00000426248 RGMBQ6NW40 437 aa16.9■□□□□ 0.3
PKP4-205ENST00000426248 PLEKHG4BQ96PX9 1271 aa16.9■□□□□ 0.3
PKP4-205ENST00000426248 BEGAINQ9BUH8 593 aa16.9■□□□□ 0.3
PKP4-205ENST00000426248 IMPG2Q9BZV3 1241 aa16.9■□□□□ 0.3
PKP4-205ENST00000426248 IKZF4Q9H2S9 585 aa16.9■□□□□ 0.3
PKP4-205ENST00000426248 IMPDH2P12268 514 aa16.89■□□□□ 0.3
PKP4-205ENST00000426248 SERPINB3P29508 390 aa16.89■□□□□ 0.3
PKP4-205ENST00000426248 MCL1Q07820 350 aa16.89■□□□□ 0.3
PKP4-205ENST00000426248 LONRF1Q17RB8 773 aa16.89■□□□□ 0.3
PKP4-205ENST00000426248 P3H1Q32P28 736 aa16.89■□□□□ 0.3
PKP4-205ENST00000426248 PPP4R3CPQ6ZMV5 832 aa16.89■□□□□ 0.3
PKP4-205ENST00000426248 PPM1KQ8N3J5 372 aa16.89■□□□□ 0.3
PKP4-205ENST00000426248 OR6J1Q8NGC5 347 aa16.89■□□□□ 0.3
PKP4-205ENST00000426248 LRRC37BQ96QE4 947 aa16.89■□□□□ 0.3
PKP4-205ENST00000426248 CYP26B1Q9NR63 512 aa16.89■□□□□ 0.3
PKP4-205ENST00000426248 LAMB1P07942 1786 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 TMEM120BA0PK00 339 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 EDIL3O43854 480 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 KRT5P13647 590 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 EPHB2P29323 1055 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 DR1Q01658 176 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 EMC2Q15006 297 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 PRAMEF19Q5SWL8 479 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 CENPPQ6IPU0 288 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 RNF149Q8NC42 400 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 GTF3C2Q8WUA4 911 aaPredicted RBP16.89■□□□□ 0.29
PKP4-205ENST00000426248 PSPC1Q8WXF1 523 aaKnown RBP16.89■□□□□ 0.29
PKP4-205ENST00000426248 MYL3P08590 195 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 PLS3P13797 630 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 GCLMP48507 274 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 RCN1Q15293 331 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 ZNF507Q8TCN5 953 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 DUSP9Q99956 384 aaKnown RBP16.89■□□□□ 0.29
PKP4-205ENST00000426248 GCNT4Q9P109 453 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 SLC4A7Q9Y6M7 1214 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 SOWAHBA6NEL2 793 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 LRRN2O75325 713 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 KRT19P08727 400 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 ADCYAP1R1P41586 468 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 CASP4P49662 377 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 FKBP1BP68106 108 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 ZNF211Q13398 564 aaPredicted RBP16.89■□□□□ 0.29
PKP4-205ENST00000426248 C4orf19Q8IY42 314 aa16.89■□□□□ 0.29
PKP4-205ENST00000426248 AFG1LQ8WV93 481 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms