RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 BMT2Q1RMZ1 405 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 ATAT1Q5SQI0 421 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 DSTYKQ6XUX3 929 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 SLC7A14Q8TBB6 771 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 SMG7Q92540 1137 aaKnown RBP14.75□□□□□ -0.05
SNX3-204ENST00000426155 NECTIN4Q96NY8 510 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 DPP3Q9NY33 737 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 USP25Q9UHP3 1055 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 FBXL5Q9UKA1 691 aa14.75□□□□□ -0.05
SNX3-204ENST00000426155 TBC1D4O60343 1298 aa14.74□□□□□ -0.05
SNX3-204ENST00000426155 ZMYND10O75800 440 aa14.74□□□□□ -0.05
SNX3-204ENST00000426155 LDHAP00338 332 aaKnown RBP14.74□□□□□ -0.05
SNX3-204ENST00000426155 OR4Q2P0C623 313 aa14.74□□□□□ -0.05
SNX3-204ENST00000426155 LILRA4P59901 499 aa14.74□□□□□ -0.05
SNX3-204ENST00000426155 DPYDQ12882 1025 aa14.74□□□□□ -0.05
SNX3-204ENST00000426155 CTXN3Q4LDR2 81 aa14.74□□□□□ -0.05
SNX3-204ENST00000426155 SLC8B1Q6J4K2 584 aa14.74□□□□□ -0.05
SNX3-204ENST00000426155 C15orf39Q6ZRI6 1047 aa14.74□□□□□ -0.05
SNX3-204ENST00000426155 RDH13Q8NBN7 331 aa14.74□□□□□ -0.05
SNX3-204ENST00000426155 CMASQ8NFW8 434 aaPredicted RBP14.74□□□□□ -0.05
SNX3-204ENST00000426155 SENP8Q96LD8 212 aa14.74□□□□□ -0.05
SNX3-204ENST00000426155 TSPAN18Q96SJ8 248 aa14.74□□□□□ -0.05
SNX3-204ENST00000426155 MTMR12Q9C0I1 747 aa14.74□□□□□ -0.05
SNX3-204ENST00000426155 PLEKHA4Q9H4M7 779 aa14.74□□□□□ -0.05
SNX3-204ENST00000426155 C11orf16Q9NQ32 467 aa14.74□□□□□ -0.05
SNX3-204ENST00000426155 CCL16O15467 120 aa14.73□□□□□ -0.05
SNX3-204ENST00000426155 N4BP1O75113 896 aaKnown RBP14.73□□□□□ -0.05
SNX3-204ENST00000426155 ITGB3P05106 788 aa14.73□□□□□ -0.05
SNX3-204ENST00000426155 POLR2BP30876 1174 aaKnown RBP14.73□□□□□ -0.05
SNX3-204ENST00000426155 CDR1P51861 262 aa14.73□□□□□ -0.05
SNX3-204ENST00000426155 NTHL1P78549 312 aa14.73□□□□□ -0.05
SNX3-204ENST00000426155 PPM1LQ5SGD2 360 aa14.73□□□□□ -0.05
SNX3-204ENST00000426155 LIN9Q5TKA1 542 aa14.73□□□□□ -0.05
SNX3-204ENST00000426155 ZNF280DQ6N043 979 aa14.73□□□□□ -0.05
SNX3-204ENST00000426155 CCDC149Q6ZUS6 474 aa14.73□□□□□ -0.05
SNX3-204ENST00000426155 FMR1NBQ8N0W7 255 aaPredicted RBP14.73□□□□□ -0.05
SNX3-204ENST00000426155 C1orf127Q8N9H9 656 aa14.73□□□□□ -0.05
SNX3-204ENST00000426155 OR5B17Q8NGF7 314 aa14.73□□□□□ -0.05
SNX3-204ENST00000426155 HDAC7Q8WUI4 952 aa14.73□□□□□ -0.05
SNX3-204ENST00000426155 ERCC4Q92889 916 aaPredicted RBP14.73□□□□□ -0.05
SNX3-204ENST00000426155 TMEM209Q96SK2 561 aa14.73□□□□□ -0.05
SNX3-204ENST00000426155 PIDD1Q9HB75 910 aa14.73□□□□□ -0.05
SNX3-204ENST00000426155 DPP7Q9UHL4 492 aa14.73□□□□□ -0.05
SNX3-204ENST00000426155 CLUHO75153 1309 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 PI4K2BG5E9Z4 385 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 H7C4K7 107 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 DCXO43602 365 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 SEC24AO95486 1093 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 CPB1P15086 417 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 TAF6P49848 677 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 POU5F1Q01860 360 aaKnown RBP14.72□□□□□ -0.05
SNX3-204ENST00000426155 YWHAHQ04917 246 aaPredicted RBP14.72□□□□□ -0.05
SNX3-204ENST00000426155 PNOCQ13519 176 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 SNRNP35Q16560 246 aaKnown RBP14.72□□□□□ -0.05
SNX3-204ENST00000426155 KNOP1Q1ED39 458 aaKnown RBP14.72□□□□□ -0.05
SNX3-204ENST00000426155 ELMSAN1Q6PJG2 1045 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 TDRD5Q8NAT2 981 aaKnown RBP14.72□□□□□ -0.05
SNX3-204ENST00000426155 APPL2Q8NEU8 664 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 CXorf38Q8TB03 319 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 PRKD2Q9BZL6 878 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 SMOC2Q9H3U7 446 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 HCFC1R1Q9NWW0 138 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 ZDHHC7Q9NXF8 308 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 SIX4Q9UIU6 781 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 POLIQ9UNA4 740 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 AGAP1Q9UPQ3 857 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 MAPK8IP1Q9UQF2 711 aa14.72□□□□□ -0.05
SNX3-204ENST00000426155 GOLGA6L4A6NEF3 574 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 ZNF233A6NK53 670 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 KIAA0391O15091 583 aaKnown RBP14.71□□□□□ -0.05
SNX3-204ENST00000426155 ABLIM3O94929 683 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 PAPLNO95428 1278 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 VNN2O95498 520 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 C1RP00736 705 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 MYL1P05976 194 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 ASGR2P07307 311 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 KRT19P08727 400 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 TMEM191BP0C7N4 346 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 ODC1P11926 461 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 SNW1Q13573 536 aaKnown RBP14.71□□□□□ -0.05
SNX3-204ENST00000426155 OVOS1Q6IE37 1185 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 RNF19BQ6ZMZ0 732 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 GET4Q7L5D6 327 aaPredicted RBP14.71□□□□□ -0.05
SNX3-204ENST00000426155 HS2ST1Q7LGA3 356 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 GRASPQ7Z6J2 395 aaPredicted RBP14.71□□□□□ -0.05
SNX3-204ENST00000426155 NT5DC4Q86YG4 428 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 SMYD4Q8IYR2 804 aaPredicted RBP14.71□□□□□ -0.05
SNX3-204ENST00000426155 XXYLT1Q8NBI6 393 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 ENGASEQ8NFI3 743 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 ST13P5Q8NFI4 369 aaPredicted RBP14.71□□□□□ -0.05
SNX3-204ENST00000426155 ZNF461Q8TAF7 563 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 CCDC127Q96BQ5 260 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 BORCS6Q96GS4 357 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 PGLYRP2Q96PD5 576 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 GZF1Q9H116 711 aaPredicted RBP14.71□□□□□ -0.05
SNX3-204ENST00000426155 CRISPLD1Q9H336 500 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 KCTD10Q9H3F6 313 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 WDR6Q9NNW5 1121 aaKnown RBP14.71□□□□□ -0.05
SNX3-204ENST00000426155 NR2E1Q9Y466 385 aa14.71□□□□□ -0.05
SNX3-204ENST00000426155 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms