RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 CDH8P55286 799 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 SKOR1P84550 965 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 CENPCQ03188 943 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 PPP2R5EQ16537 467 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 C9orf131Q5VYM1 1079 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 DENND2CQ68D51 928 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 CHADLQ6NUI6 762 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 BRSK2Q8IWQ3 736 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 EIF1ADQ8N9N8 165 aaKnown RBP12.3□□□□□ -0.44
UBR4-207ENST00000425413 HAUS1Q96CS2 278 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 TSPYL1Q9H0U9 437 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 CISHQ9NSE2 258 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 PCYOX1Q9UHG3 505 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 KCNG1Q9UIX4 513 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 GOLGA8SH3BPF8 625 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 ACSL3O95573 720 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 POTEJP0CG39 1038 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 HSPA6P17066 643 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 MDH1P40925 334 aaKnown RBP12.3□□□□□ -0.44
UBR4-207ENST00000425413 PSMC4P43686 418 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 CCDC38Q502W7 563 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 IER5Q5VY09 327 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 MORC4Q8TE76 937 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 MCEEQ96PE7 176 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 EPB41L4BQ9H329 900 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 TMEM134Q9H6X4 195 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 AGTPBP1Q9UPW5 1226 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 GINS2Q9Y248 185 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 ARID2Q68CP9 1835 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 PASKQ96RG2 1323 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 OGTO15294 1046 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 PROSCO94903 275 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 TGFB3P10600 412 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 ATF7P17544 494 aaPredicted RBP12.3□□□□□ -0.44
UBR4-207ENST00000425413 ATF7IP2Q5U623 682 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 GPAT2Q6NUI2 795 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 RUFY4Q6ZNE9 571 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 EFCAB13Q8IY85 973 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 TFAP2BQ92481 460 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 DDX27Q96GQ7 796 aaKnown RBP12.3□□□□□ -0.44
UBR4-207ENST00000425413 DDX23Q9BUQ8 820 aaKnown RBP12.3□□□□□ -0.44
UBR4-207ENST00000425413 TJP2Q9UDY2 1190 aa12.3□□□□□ -0.44
UBR4-207ENST00000425413 MTRF1LQ9UGC7 380 aaKnown RBP12.3□□□□□ -0.44
UBR4-207ENST00000425413 FOXO6A8MYZ6 492 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 ASS1P00966 412 aaKnown RBP12.29□□□□□ -0.44
UBR4-207ENST00000425413 IQCF3P0C7M6 154 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 EFNA5P52803 228 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 MCCD1P59942 119 aaPredicted RBP12.29□□□□□ -0.44
UBR4-207ENST00000425413 ADCY2Q08462 1091 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 CALCOCO2Q13137 446 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 DUOXA2Q1HG44 320 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 ZNF699Q32M78 642 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 FAM182AQ5T1J6 154 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 DCUN1D2Q6PH85 259 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 EPS8L3Q8TE67 593 aaKnown RBP12.29□□□□□ -0.44
UBR4-207ENST00000425413 CPB2Q96IY4 423 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 SELENOSQ9BQE4 189 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 PLVAPQ9BX97 442 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.29□□□□□ -0.44
UBR4-207ENST00000425413 F8VP50 259 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 EBAG9O00559 213 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 PODXLO00592 558 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 FSCN2O14926 492 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 FAM189A1O60320 539 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 VTNP04004 478 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 ZNF286BP0CG31 522 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 TBXAS1P24557 533 aaPredicted RBP12.29□□□□□ -0.44
UBR4-207ENST00000425413 CHKAP35790 457 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 IFI35P80217 286 aaPredicted RBP12.29□□□□□ -0.44
UBR4-207ENST00000425413 ZPBP2Q6X784 338 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 ZNF677Q86XU0 584 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 SCLT1Q96NL6 688 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 PABPC3Q9H361 631 aaKnown RBP12.29□□□□□ -0.44
UBR4-207ENST00000425413 AVENQ9NQS1 362 aaPredicted RBP12.29□□□□□ -0.44
UBR4-207ENST00000425413 DNAH12Q6ZR08 3092 aa12.29□□□□□ -0.44
UBR4-207ENST00000425413 SPDYE5A6NIY4 337 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 ABCD1P33897 745 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 ADCY8P40145 1251 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 CLUL1Q15846 466 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 TXNRD3NBQ6F5E7 133 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 TAB3Q8N5C8 712 aaPredicted RBP12.28□□□□□ -0.44
UBR4-207ENST00000425413 FAM167AQ96KS9 214 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 RNF19AQ9NV58 838 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.28□□□□□ -0.44
UBR4-207ENST00000425413 ZNFX1Q9P2E3 1918 aaKnown RBP12.28□□□□□ -0.44
UBR4-207ENST00000425413 MCM3APO60318 1980 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 PIK3R2O00459 728 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 GJA5P36382 358 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 MXD4Q14582 209 aaPredicted RBP12.28□□□□□ -0.44
UBR4-207ENST00000425413 PTGISQ16647 500 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 WDR72Q3MJ13 1102 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 GSTA5Q7RTV2 222 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 CCDC125Q86Z20 511 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 WDR49Q8IV35 697 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.28□□□□□ -0.44
UBR4-207ENST00000425413 TRIM11Q96F44 468 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 TXLNGYQ9BZA5 131 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 NIF3L1Q9GZT8 377 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 AKT3Q9Y243 479 aa12.28□□□□□ -0.44
UBR4-207ENST00000425413 SLC25A27O95847 323 aa12.27□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms