RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 ZRSR1Q15695 479 aaKnown RBP13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 VITQ6UXI7 678 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 LONP2Q86WA8 852 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 RALGPS2Q86X27 583 aaPredicted RBP13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 METTL23Q86XA0 190 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CD302Q8IX05 232 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 THEM5Q8N1Q8 247 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 C3orf58Q8NDZ4 430 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 FBXO18Q8NFZ0 1043 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 TCEAL4Q96EI5 215 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 KIF12Q96FN5 646 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CXCL16Q9H2A7 254 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 ATXN3LQ9H3M9 355 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 KCND2Q9NZV8 630 aa13.36□□□□□ -0.27
HLA-DQB3-203ENST00000425319 MTCL1Q9Y4B5 1905 aaKnown RBP13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 E9PMD0 336 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 OAZ2O95190 189 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 PLS3P13797 630 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 PRPHP41219 470 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 SOX4Q06945 474 aaPredicted RBP13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 GPR17Q13304 367 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 FZD5Q13467 585 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 MYBPC2Q14324 1141 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 TEAD2Q15562 447 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CSRP2Q16527 193 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 LPAL2Q16609 132 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 RINT1Q6NUQ1 792 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CD300LGQ6UXG3 332 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 RNF19BQ6ZMZ0 732 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CCDC83Q8IWF9 413 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 HS6ST3Q8IZP7 471 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CEP120Q8N960 986 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 C12orf50Q8NA57 414 aaPredicted RBP13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 BEST2Q8NFU1 509 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 SPIRE2Q8WWL2 714 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CNTNAP3BQ96NU0 1288 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CNTNAP3Q9BZ76 1288 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 RPF1Q9H9Y2 349 aaKnown RBP13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 SH2B1Q9NRF2 756 aaPredicted RBP13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 SEMA4GQ9NTN9 838 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 OBP2AQ9NY56 170 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CEP72Q9P209 647 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 ARHGAP28Q9P2N2 729 aa13.35□□□□□ -0.27
HLA-DQB3-203ENST00000425319 A0A1W2PRU2 124 aa13.34□□□□□ -0.27
HLA-DQB3-203ENST00000425319 SFI1A8K8P3 1242 aa13.34□□□□□ -0.27
HLA-DQB3-203ENST00000425319 WNT7AO00755 349 aa13.34□□□□□ -0.27
HLA-DQB3-203ENST00000425319 SLC30A4O14863 429 aa13.34□□□□□ -0.27
HLA-DQB3-203ENST00000425319 CHRNB1P11230 501 aa13.34□□□□□ -0.27
HLA-DQB3-203ENST00000425319 GUCY2CP25092 1073 aa13.34□□□□□ -0.27
HLA-DQB3-203ENST00000425319 LIG4P49917 911 aa13.34□□□□□ -0.27
HLA-DQB3-203ENST00000425319 EPHA5P54756 1037 aa13.34□□□□□ -0.27
HLA-DQB3-203ENST00000425319 SMARCB1Q12824 385 aa13.34□□□□□ -0.27
HLA-DQB3-203ENST00000425319 DUSP4Q13115 394 aa13.34□□□□□ -0.27
HLA-DQB3-203ENST00000425319 OVOS1Q6IE37 1185 aa13.34□□□□□ -0.27
HLA-DQB3-203ENST00000425319 IGSF22Q8N9C0 903 aa13.34□□□□□ -0.27
HLA-DQB3-203ENST00000425319 C18orf25Q96B23 403 aaPredicted RBP13.34□□□□□ -0.27
HLA-DQB3-203ENST00000425319 ZMAT2Q96NC0 199 aaKnown RBP13.34□□□□□ -0.27
HLA-DQB3-203ENST00000425319 HSFX1Q9UBD0 423 aa13.34□□□□□ -0.27
HLA-DQB3-203ENST00000425319 DSEQ9UL01 958 aa13.34□□□□□ -0.27
HLA-DQB3-203ENST00000425319 YIPF1Q9Y548 306 aa13.34□□□□□ -0.27
HLA-DQB3-203ENST00000425319 M0QZQ0 153 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 LARGE1O95461 756 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 ODC1P11926 461 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 GJA1P17302 382 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 TYMPP19971 482 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 KCNA4P22459 653 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 PROZP22891 400 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 FCARP24071 287 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 CDC25CP30307 473 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 LRPAP1P30533 357 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 MCL1Q07820 350 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 SLC10A6Q3KNW5 377 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 AASDHQ4L235 1098 aaPredicted RBP13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 GPR158Q5T848 1215 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 CC2D1AQ6P1N0 951 aaPredicted RBP13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 C1orf186Q6ZWK4 172 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 DNAJB7Q7Z6W7 309 aaPredicted RBP13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 ARID3BQ8IVW6 561 aaPredicted RBP13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 CCDC26Q8TAB7 109 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 BPIFB1Q8TDL5 484 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 FAM212AQ96EL1 285 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 ZSWIM3Q96MP5 696 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 PGLYRP2Q96PD5 576 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 SLC8A2Q9UPR5 921 aa13.33□□□□□ -0.28
HLA-DQB3-203ENST00000425319 CHURC1-FNTBB4DL54 471 aa13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 SPECC1L-ADORA2AF8WAN1 911 aa13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 EDN1P05305 212 aa13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 KRT18P05783 430 aaKnown RBP13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 ADRB1P08588 477 aa13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 GABRR2P28476 465 aa13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 CCR2P41597 374 aa13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 FNTBP49356 437 aa13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 FCHO2Q0JRZ9 810 aa13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 GRSF1Q12849 480 aaKnown RBP eCLIP13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 ECM1Q16610 540 aa13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 RILPL1Q5EBL4 403 aa13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 PPM1JQ5JR12 505 aa13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 HEATR6Q6AI08 1181 aaKnown RBP13.32□□□□□ -0.28
HLA-DQB3-203ENST00000425319 MCTP1Q6DN14 999 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms