RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 MFAP3P55082 362 aa16.09■□□□□ 0.17
CALD1-206ENST00000424922 PAK2Q13177 524 aa16.09■□□□□ 0.17
CALD1-206ENST00000424922 TMEM132DQ14C87 1099 aa16.09■□□□□ 0.17
CALD1-206ENST00000424922 TMEM130Q8N3G9 435 aa16.09■□□□□ 0.17
CALD1-206ENST00000424922 RNF39Q9H2S5 420 aa16.09■□□□□ 0.17
CALD1-206ENST00000424922 HYOU1Q9Y4L1 999 aa16.09■□□□□ 0.17
CALD1-206ENST00000424922 IPPQ9Y573 584 aa16.09■□□□□ 0.17
CALD1-206ENST00000424922 BTNL10A8MVZ5 291 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 EVI5O60447 810 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 SRGAP2O75044 1071 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 CAND2O75155 1236 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 RECQL4O94761 1208 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 SGPL1O95470 568 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 HSPA1AP0DMV8 641 aaKnown RBP16.08■□□□□ 0.16
CALD1-206ENST00000424922 HSPA1BP0DMV9 641 aaKnown RBP16.08■□□□□ 0.16
CALD1-206ENST00000424922 MYL6P60660 151 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 VSNL1P62760 191 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 TRPC3Q13507 836 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 CD302Q8IX05 232 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 FAM126BQ8IXS8 530 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 SMG8Q8ND04 991 aaKnown RBP16.08■□□□□ 0.16
CALD1-206ENST00000424922 RUBCNQ92622 972 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 SNX27Q96L92 541 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 SEZ6LQ9BYH1 1024 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 CRISPLD2Q9H0B8 497 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 PLEKHA5Q9HAU0 1116 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 APOBEC3GQ9HC16 384 aaKnown RBP16.08■□□□□ 0.16
CALD1-206ENST00000424922 ERVK-5Q9HDB9 667 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 ABCB6Q9NP58 842 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 CHST12Q9NRB3 414 aa16.08■□□□□ 0.16
CALD1-206ENST00000424922 KRT19P08727 400 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 FERP16591 822 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 PRKCIP41743 596 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 CTCFP49711 727 aaPredicted RBP16.07■□□□□ 0.16
CALD1-206ENST00000424922 ATN1P54259 1190 aaPredicted RBP16.07■□□□□ 0.16
CALD1-206ENST00000424922 NOP14P78316 857 aaKnown RBP16.07■□□□□ 0.16
CALD1-206ENST00000424922 NAB2Q15742 525 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 CNPY4Q8N129 248 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 MMGT1Q8N4V1 131 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 C1orf127Q8N9H9 656 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 CAGE1Q8TC20 777 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 KIF12Q96FN5 646 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 IMPG2Q9BZV3 1241 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 KLK14Q9P0G3 267 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 PARP2Q9UGN5 583 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 PCDHB2Q9Y5E7 798 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 USP8P40818 1118 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 GCNT1Q02742 428 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 PTK2Q05397 1052 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 SMC1AQ14683 1233 aaKnown RBP16.07■□□□□ 0.16
CALD1-206ENST00000424922 PKN2Q16513 984 aaKnown RBP16.07■□□□□ 0.16
CALD1-206ENST00000424922 TRAF7Q6Q0C0 670 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 CREG2Q8IUH2 290 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 RNF19AQ9NV58 838 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 SIX4Q9UIU6 781 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 C2CD2Q9Y426 696 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 NUB1Q9Y5A7 615 aa16.07■□□□□ 0.16
CALD1-206ENST00000424922 UMODL1Q5DID0 1318 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 PDE2AO00408 941 aaPredicted RBP16.06■□□□□ 0.16
CALD1-206ENST00000424922 PQBP1O60828 265 aaKnown RBP16.06■□□□□ 0.16
CALD1-206ENST00000424922 ASS1P00966 412 aaKnown RBP16.06■□□□□ 0.16
CALD1-206ENST00000424922 ITGB3P05106 788 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 MNX1P50219 401 aaPredicted RBP16.06■□□□□ 0.16
CALD1-206ENST00000424922 GUCY2FP51841 1108 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 SGSM1Q2NKQ1 1148 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 ALKAL1Q6UXT8 129 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 SHC3Q92529 594 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 ARMC5Q96C12 935 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 CAPZA3Q96KX2 299 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 ZMAT2Q96NC0 199 aaKnown RBP16.06■□□□□ 0.16
CALD1-206ENST00000424922 FAM105AQ9NUU6 356 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 RNF14Q9UBS8 474 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 SALL4Q9UJQ4 1053 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 TET1Q8NFU7 2136 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 SCN5AQ14524 2016 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 CD4P01730 458 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 MBTPS1Q14703 1052 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 MAP9Q49MG5 647 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 GLRA4Q5JXX5 417 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 ZNF571Q7Z3V5 609 aaPredicted RBP16.06■□□□□ 0.16
CALD1-206ENST00000424922 NT5DC4Q86YG4 428 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 FMNL3Q8IVF7 1028 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 USP38Q8NB14 1042 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 OSBPL9Q96SU4 736 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.06■□□□□ 0.16
CALD1-206ENST00000424922 YY1AP1Q9H869 796 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 DPP3Q9NY33 737 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 SQORQ9Y6N5 450 aa16.06■□□□□ 0.16
CALD1-206ENST00000424922 TDRD15B5MCY1 1934 aaKnown RBP16.06■□□□□ 0.16
CALD1-206ENST00000424922 MGEA5O60502 916 aa16.05■□□□□ 0.16
CALD1-206ENST00000424922 CCDC172P0C7W6 258 aa16.05■□□□□ 0.16
CALD1-206ENST00000424922 GPS2Q13227 327 aa16.05■□□□□ 0.16
CALD1-206ENST00000424922 CUL2Q13617 745 aa16.05■□□□□ 0.16
CALD1-206ENST00000424922 ZNF699Q32M78 642 aa16.05■□□□□ 0.16
CALD1-206ENST00000424922 CCDC70Q6NSX1 233 aa16.05■□□□□ 0.16
CALD1-206ENST00000424922 ENOSF1Q7L5Y1 443 aa16.05■□□□□ 0.16
CALD1-206ENST00000424922 FAM71AQ8IYT1 594 aa16.05■□□□□ 0.16
CALD1-206ENST00000424922 FAM81BQ96LP2 452 aa16.05■□□□□ 0.16
CALD1-206ENST00000424922 XYLT2Q9H1B5 865 aa16.05■□□□□ 0.16
CALD1-206ENST00000424922 CNTN3Q9P232 1028 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms