RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 NOLC1Q14978 699 aaKnown RBP eCLIP14.13□□□□□ -0.15
VRK3-203ENST00000424804 SLC39A14Q15043 492 aa14.13□□□□□ -0.15
VRK3-203ENST00000424804 FAM78AQ5JUQ0 283 aa14.13□□□□□ -0.15
VRK3-203ENST00000424804 TPGS2Q68CL5 300 aa14.13□□□□□ -0.15
VRK3-203ENST00000424804 SLC39A4Q6P5W5 647 aa14.13□□□□□ -0.15
VRK3-203ENST00000424804 RNF19BQ6ZMZ0 732 aa14.13□□□□□ -0.15
VRK3-203ENST00000424804 SUMF1Q8NBK3 374 aa14.13□□□□□ -0.15
VRK3-203ENST00000424804 NELL1Q92832 810 aa14.13□□□□□ -0.15
VRK3-203ENST00000424804 ELSPBP1Q96BH3 223 aa14.13□□□□□ -0.15
VRK3-203ENST00000424804 SHDQ96IW2 340 aa14.13□□□□□ -0.15
VRK3-203ENST00000424804 PANK2Q9BZ23 570 aa14.13□□□□□ -0.15
VRK3-203ENST00000424804 SEMA4AQ9H3S1 761 aa14.13□□□□□ -0.15
VRK3-203ENST00000424804 LTB4R2Q9NPC1 389 aa14.13□□□□□ -0.15
VRK3-203ENST00000424804 PCDHB8Q9UN66 801 aa14.13□□□□□ -0.15
VRK3-203ENST00000424804 SCN1AP35498 2009 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 FAM170BA6NMN3 283 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 LACTBL1A8MY62 500 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 H7C4K7 107 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 PPEF2O14830 753 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 SPTLC2O15270 562 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 OAZ2O95190 189 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 PIGRP01833 764 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 LMNAP02545 664 aaKnown RBP14.12□□□□□ -0.15
VRK3-203ENST00000424804 TARSP26639 723 aaKnown RBP14.12□□□□□ -0.15
VRK3-203ENST00000424804 GUCY2FP51841 1108 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 ZNF131P52739 623 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 ARPP19P56211 112 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 ADCY1Q08828 1119 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 BECN1Q14457 450 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 CTXN3Q4LDR2 81 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 RRAGBQ5VZM2 374 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 HAUS6Q7Z4H7 955 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 KRI1Q8N9T8 703 aaKnown RBP14.12□□□□□ -0.15
VRK3-203ENST00000424804 RAD54LQ92698 747 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 CORO1BQ9BR76 489 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 PLEKHA5Q9HAU0 1116 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 CYP4F11Q9HBI6 524 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 KCND2Q9NZV8 630 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 ANKFY1Q9P2R3 1169 aa14.12□□□□□ -0.15
VRK3-203ENST00000424804 AFF4Q9UHB7 1163 aaKnown RBP14.12□□□□□ -0.15
VRK3-203ENST00000424804 CLDN3O15551 220 aa14.11□□□□□ -0.15
VRK3-203ENST00000424804 SLC26A4O43511 780 aa14.11□□□□□ -0.15
VRK3-203ENST00000424804 FAM13AO94988 1023 aa14.11□□□□□ -0.15
VRK3-203ENST00000424804 LRG1P02750 347 aa14.11□□□□□ -0.15
VRK3-203ENST00000424804 CLTAP09496 248 aa14.11□□□□□ -0.15
VRK3-203ENST00000424804 PDIA4P13667 645 aaKnown RBP14.11□□□□□ -0.15
VRK3-203ENST00000424804 CYP3A5P20815 502 aa14.11□□□□□ -0.15
VRK3-203ENST00000424804 NASPP49321 788 aaPredicted RBP14.11□□□□□ -0.15
VRK3-203ENST00000424804 PFKPQ01813 784 aa14.11□□□□□ -0.15
VRK3-203ENST00000424804 STRN3Q13033 797 aa14.11□□□□□ -0.15
VRK3-203ENST00000424804 ENOX2Q16206 610 aaKnown RBP14.11□□□□□ -0.15
VRK3-203ENST00000424804 MAP4K3Q8IVH8 894 aa14.11□□□□□ -0.15
VRK3-203ENST00000424804 PDILTQ8N807 584 aa14.11□□□□□ -0.15
VRK3-203ENST00000424804 LARP4BQ92615 738 aaKnown RBP14.11□□□□□ -0.15
VRK3-203ENST00000424804 ASB16Q96NS5 453 aa14.11□□□□□ -0.15
VRK3-203ENST00000424804 REEP2Q9BRK0 252 aa14.11□□□□□ -0.15
VRK3-203ENST00000424804 CCSER1Q9C0I3 900 aa14.11□□□□□ -0.15
VRK3-203ENST00000424804 DNAJC25Q9H1X3 360 aa14.11□□□□□ -0.15
VRK3-203ENST00000424804 HEBP1Q9NRV9 189 aa14.11□□□□□ -0.15
VRK3-203ENST00000424804 MAFFQ9ULX9 164 aa14.11□□□□□ -0.15
VRK3-203ENST00000424804 NUB1Q9Y5A7 615 aa14.11□□□□□ -0.15
VRK3-203ENST00000424804 TIMM13Q9Y5L4 95 aaPredicted RBP14.11□□□□□ -0.15
VRK3-203ENST00000424804 TICRRQ7Z2Z1 1910 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 PRRG1O14668 218 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 SPTLC1O15269 473 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 OR4Q2P0C623 313 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 GJA1P17302 382 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 RFX1P22670 979 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 ELF1P32519 619 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 MCM4P33991 863 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 SMTNP53814 917 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 TWF1Q12792 350 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 ZNF528Q3MIS6 628 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 VITQ6UXI7 678 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 TMC8Q8IU68 726 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 DCLK2Q8N568 766 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 MYCT1Q8N699 235 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 LINC00301Q8NCQ3 95 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 RSPRY1Q96DX4 576 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 TRPV4Q9HBA0 871 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 KCNG1Q9UIX4 513 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 FBXO4Q9UKT5 387 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 ODF2LQ9ULJ1 636 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 TBX20Q9UMR3 447 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 TSC2P49815 1807 aa14.1□□□□□ -0.15
VRK3-203ENST00000424804 A0A0B4J269 797 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 ANKRD63C9JTQ0 380 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 ARNTLO00327 626 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 TBCAO75347 108 aaKnown RBP14.09□□□□□ -0.15
VRK3-203ENST00000424804 TDGF1P13385 188 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 VIPR2P41587 438 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 STAT6P42226 847 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 MATR3P43243 847 aaKnown RBP eCLIP14.09□□□□□ -0.15
VRK3-203ENST00000424804 RPS9P46781 194 aaKnown RBP14.09□□□□□ -0.15
VRK3-203ENST00000424804 DNM1Q05193 864 aaKnown RBP14.09□□□□□ -0.15
VRK3-203ENST00000424804 GRM2Q14416 872 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 UBXN2BQ14CS0 331 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 SPATA1Q5VX52 437 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 ZNF280DQ6N043 979 aa14.09□□□□□ -0.15
VRK3-203ENST00000424804 TPRG1Q6ZUI0 275 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms