RNA–Protein interactions for RNA: ENST00000424443.7

TSPAN3-203, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-203ENST00000424443 PER2O15055 1255 aa27.37■■□□□ 1.97
TSPAN3-203ENST00000424443 NCK2O43639 380 aa27.37■■□□□ 1.97
TSPAN3-203ENST00000424443 CLSTN1O94985 981 aa27.37■■□□□ 1.97
TSPAN3-203ENST00000424443 CLDN10P78369 228 aa27.37■■□□□ 1.97
TSPAN3-203ENST00000424443 CT47A1Q5JQC4 288 aaPredicted RBP27.37■■□□□ 1.97
TSPAN3-203ENST00000424443 TCERG1LQ5VWI1 586 aa27.37■■□□□ 1.97
TSPAN3-203ENST00000424443 PIK3R5Q8WYR1 880 aa27.37■■□□□ 1.97
TSPAN3-203ENST00000424443 ZNF516Q92618 1163 aa27.37■■□□□ 1.97
TSPAN3-203ENST00000424443 SRRTQ9BXP5 876 aaKnown RBP27.37■■□□□ 1.97
TSPAN3-203ENST00000424443 METTL14Q9HCE5 456 aaKnown RBP27.37■■□□□ 1.97
TSPAN3-203ENST00000424443 ANO10Q9NW15 660 aa27.37■■□□□ 1.97
TSPAN3-203ENST00000424443 PCDHB8Q9UN66 801 aa27.37■■□□□ 1.97
TSPAN3-203ENST00000424443 KPNA7A9QM74 516 aa27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 ODC1P11926 461 aa27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 KLRC2P26717 231 aa27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 AARSP49588 968 aaKnown RBP eCLIP27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 HYAL1Q12794 435 aa27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 PSMD5Q16401 504 aa27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 EP400NLQ6ZTU2 488 aa27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 ANKS3Q6ZW76 656 aa27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 SENP8Q96LD8 212 aa27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 SIX4Q9UIU6 781 aa27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 M0QZQ0 153 aa27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 STX10O60499 249 aa27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 LILRB3O75022 631 aa27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 LETM1O95202 739 aaPredicted RBP27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 GNA14O95837 355 aa27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 ERCC5P28715 1186 aaPredicted RBP27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 STX1AQ16623 288 aa27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 DUSP6Q16828 381 aa27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 DCAF17Q5H9S7 520 aaPredicted RBP27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 PRSS55Q6UWB4 352 aaPredicted RBP27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 MMRN2Q9H8L6 949 aa27.36■■□□□ 1.97
TSPAN3-203ENST00000424443 SPTLC1O15269 473 aa27.35■■□□□ 1.97
TSPAN3-203ENST00000424443 ADH1AP07327 375 aa27.35■■□□□ 1.97
TSPAN3-203ENST00000424443 CNPP09543 421 aaKnown RBP27.35■■□□□ 1.97
TSPAN3-203ENST00000424443 TRIM49P0CI25 452 aa27.35■■□□□ 1.97
TSPAN3-203ENST00000424443 TRIM49CP0CI26 452 aa27.35■■□□□ 1.97
TSPAN3-203ENST00000424443 FRMD5Q7Z6J6 570 aa27.35■■□□□ 1.97
TSPAN3-203ENST00000424443 PPFIBP1Q86W92 1011 aa27.35■■□□□ 1.97
TSPAN3-203ENST00000424443 LNX1Q8TBB1 728 aaPredicted RBP27.35■■□□□ 1.97
TSPAN3-203ENST00000424443 HPDLQ96IR7 371 aa27.35■■□□□ 1.97
TSPAN3-203ENST00000424443 KLHL5Q96PQ7 755 aa27.35■■□□□ 1.97
TSPAN3-203ENST00000424443 FNIP2Q9P278 1114 aa27.35■■□□□ 1.97
TSPAN3-203ENST00000424443 H7C4K7 107 aa27.34■■□□□ 1.97
TSPAN3-203ENST00000424443 CYB561D2O14569 222 aa27.34■■□□□ 1.97
TSPAN3-203ENST00000424443 VARS2Q5ST30 1063 aaKnown RBP27.34■■□□□ 1.97
TSPAN3-203ENST00000424443 TDRD10Q5VZ19 366 aaKnown RBP27.34■■□□□ 1.97
TSPAN3-203ENST00000424443 CXorf38Q8TB03 319 aa27.34■■□□□ 1.97
TSPAN3-203ENST00000424443 BORCS6Q96GS4 357 aa27.34■■□□□ 1.97
TSPAN3-203ENST00000424443 RXFP1Q9HBX9 757 aa27.34■■□□□ 1.97
TSPAN3-203ENST00000424443 DSEQ9UL01 958 aa27.34■■□□□ 1.97
TSPAN3-203ENST00000424443 SCN1AP35498 2009 aa27.34■■□□□ 1.97
TSPAN3-203ENST00000424443 CST3P01034 146 aaPredicted RBP27.33■■□□□ 1.97
TSPAN3-203ENST00000424443 C4BPAP04003 597 aaKnown RBP27.33■■□□□ 1.97
TSPAN3-203ENST00000424443 SRGAP2BP0DMP2 458 aa27.33■■□□□ 1.97
TSPAN3-203ENST00000424443 CCDC192P0DO97 292 aa27.33■■□□□ 1.97
TSPAN3-203ENST00000424443 GTF2F1P35269 517 aaKnown RBP eCLIP27.33■■□□□ 1.97
TSPAN3-203ENST00000424443 GCLMP48507 274 aa27.33■■□□□ 1.97
TSPAN3-203ENST00000424443 NDUFV1P49821 464 aa27.33■■□□□ 1.97
TSPAN3-203ENST00000424443 YWHAHQ04917 246 aaPredicted RBP27.33■■□□□ 1.97
TSPAN3-203ENST00000424443 METTL23Q86XA0 190 aa27.33■■□□□ 1.97
TSPAN3-203ENST00000424443 GLYCTKQ8IVS8 523 aa27.33■■□□□ 1.97
TSPAN3-203ENST00000424443 CLDND1Q9NY35 253 aa27.33■■□□□ 1.97
TSPAN3-203ENST00000424443 TIMM13Q9Y5L4 95 aaPredicted RBP27.33■■□□□ 1.97
TSPAN3-203ENST00000424443 TEX28O15482 410 aa27.32■■□□□ 1.96
TSPAN3-203ENST00000424443 HUS1O60921 280 aa27.32■■□□□ 1.96
TSPAN3-203ENST00000424443 CLASP2O75122 1294 aaKnown RBP27.32■■□□□ 1.96
TSPAN3-203ENST00000424443 RPL17P18621 184 aaKnown RBP27.32■■□□□ 1.96
TSPAN3-203ENST00000424443 GTF2H1P32780 548 aa27.32■■□□□ 1.96
TSPAN3-203ENST00000424443 ZNF280DQ6N043 979 aa27.32■■□□□ 1.96
TSPAN3-203ENST00000424443 SV2AQ7L0J3 742 aa27.32■■□□□ 1.96
TSPAN3-203ENST00000424443 CREBRFQ8IUR6 639 aa27.32■■□□□ 1.96
TSPAN3-203ENST00000424443 EFHBQ8N7U6 833 aa27.32■■□□□ 1.96
TSPAN3-203ENST00000424443 SNX9Q9Y5X1 595 aa27.32■■□□□ 1.96
TSPAN3-203ENST00000424443 VWA8A3KMH1 1905 aa27.32■■□□□ 1.96
TSPAN3-203ENST00000424443 TYMPP19971 482 aa27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 ATICP31939 592 aa27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 NCOA4Q13772 614 aa27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 ZACNQ401N2 412 aa27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 CTXN3Q4LDR2 81 aa27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 C1orf220Q5T0J3 134 aa27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 LLGL2Q6P1M3 1020 aa27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 PABPC5Q96DU9 382 aaKnown RBP27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 TMEM8AQ9HCN3 771 aa27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 MTRRQ9UBK8 725 aa27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 PIK3CAP42336 1068 aa27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 TYRO3Q06418 890 aa27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 NFKBIBQ15653 356 aa27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 KRT39Q6A163 491 aa27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 OVOS1Q6IE37 1185 aa27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 HLA-CQ95604 372 aa27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 IMPG2Q9BZV3 1241 aa27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 GDAP2Q9NXN4 497 aa27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 BACE2Q9Y5Z0 518 aa27.31■■□□□ 1.96
TSPAN3-203ENST00000424443 MXI1P50539 228 aa27.3■■□□□ 1.96
TSPAN3-203ENST00000424443 MYL6P60660 151 aa27.3■■□□□ 1.96
TSPAN3-203ENST00000424443 PPP3CAQ08209 521 aa27.3■■□□□ 1.96
TSPAN3-203ENST00000424443 SCARA3Q6AZY7 606 aa27.3■■□□□ 1.96
TSPAN3-203ENST00000424443 CCDC150Q8NCX0 1101 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms