RNA–Protein interactions for RNA: ENST00000422029.6

NDUFA3-208, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-208ENST00000422029 NCKAP1LP55160 1127 aa12.33□□□□□ -0.44
NDUFA3-208ENST00000422029 YWHAHQ04917 246 aaPredicted RBP12.33□□□□□ -0.44
NDUFA3-208ENST00000422029 PPP2R3AQ06190 1150 aa12.33□□□□□ -0.44
NDUFA3-208ENST00000422029 STXBP5Q5T5C0 1151 aa12.33□□□□□ -0.44
NDUFA3-208ENST00000422029 SCARA3Q6AZY7 606 aa12.33□□□□□ -0.44
NDUFA3-208ENST00000422029 USP37Q86T82 979 aa12.33□□□□□ -0.44
NDUFA3-208ENST00000422029 ATAD1Q8NBU5 361 aa12.33□□□□□ -0.44
NDUFA3-208ENST00000422029 APPL2Q8NEU8 664 aa12.33□□□□□ -0.44
NDUFA3-208ENST00000422029 RAD54LQ92698 747 aa12.33□□□□□ -0.44
NDUFA3-208ENST00000422029 RSPRY1Q96DX4 576 aa12.33□□□□□ -0.44
NDUFA3-208ENST00000422029 CLIC6Q96NY7 704 aa12.33□□□□□ -0.44
NDUFA3-208ENST00000422029 MSTO1Q9BUK6 570 aa12.33□□□□□ -0.44
NDUFA3-208ENST00000422029 TIPINQ9BVW5 301 aa12.33□□□□□ -0.44
NDUFA3-208ENST00000422029 SLITRK6Q9H5Y7 841 aa12.33□□□□□ -0.44
NDUFA3-208ENST00000422029 BRD9Q9H8M2 597 aa12.33□□□□□ -0.44
NDUFA3-208ENST00000422029 ZFP14Q9HCL3 533 aa12.33□□□□□ -0.44
NDUFA3-208ENST00000422029 LTB4R2Q9NPC1 389 aa12.33□□□□□ -0.44
NDUFA3-208ENST00000422029 LARSQ9P2J5 1176 aaKnown RBP12.33□□□□□ -0.44
NDUFA3-208ENST00000422029 RIF1Q5UIP0 2472 aaKnown RBP12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 CACNA1IQ9P0X4 2223 aa12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 A0A1W2PRU2 124 aa12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 SHISA7A6NL88 538 aa12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 LAMTOR5O43504 91 aa12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 TRAK2O60296 914 aa12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 TBCAO75347 108 aaKnown RBP12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 ECI2O75521 394 aa12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 LMNAP02545 664 aaKnown RBP12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 GDI1P31150 447 aa12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 ZBTB6Q15916 424 aa12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 ARL6IP4Q66PJ3 421 aaKnown RBP12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 IQCEQ6IPM2 695 aa12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 VITQ6UXI7 678 aa12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 SHKBP1Q8TBC3 707 aa12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 ZSCAN18Q8TBC5 510 aaPredicted RBP12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 NOC3LQ8WTT2 800 aaKnown RBP12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 SENP8Q96LD8 212 aa12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 BCO2Q9BYV7 579 aa12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 GDE1Q9NZC3 331 aa12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 AFF4Q9UHB7 1163 aaKnown RBP12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 UBQLN1Q9UMX0 589 aaKnown RBP12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 YIPF1Q9Y548 306 aa12.32□□□□□ -0.44
NDUFA3-208ENST00000422029 A0A0B4J269 797 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 OGTO15294 1046 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 FAM189A1O60320 539 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 HOXC13P31276 330 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 SOX9P48436 509 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 KCNA1Q09470 495 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 TPGS2Q68CL5 300 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 ADALQ6DHV7 355 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 OVOS1Q6IE37 1185 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 SFR1Q86XK3 245 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 ELMOD1Q8N336 334 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 STKLD1Q8NE28 680 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 ZSWIM2Q8NEG5 633 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 ELSPBP1Q96BH3 223 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 ZFYVE19Q96K21 471 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 LPIN3Q9BQK8 851 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 DDX23Q9BUQ8 820 aaKnown RBP12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 TRMT61BQ9BVS5 477 aaKnown RBP12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 SMG9Q9H0W8 520 aaKnown RBP12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 DNAJC25Q9H1X3 360 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 PLEKHA5Q9HAU0 1116 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 UPF2Q9HAU5 1272 aaKnown RBP12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 PARVGQ9HBI0 331 aa12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 ZNF334Q9HCZ1 680 aaPredicted RBP12.31□□□□□ -0.44
NDUFA3-208ENST00000422029 PDCD11Q14690 1871 aaKnown RBP12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 M0QZQ0 153 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 ZNF197O14709 1029 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 POU2F2P09086 479 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 LRPAP1P30533 357 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 ID4P47928 161 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 WNT7BP56706 349 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 LILRA4P59901 499 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 PFKPQ01813 784 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 PRKCQQ04759 706 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 LPAL2Q16609 132 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 C9orf57Q5W0N0 161 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 ZNF852Q6ZMS4 543 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 BEST2Q8NFU1 509 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 OR10T2Q8NGX3 314 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 FAM200AQ8TCP9 573 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 GIPC2Q8TF65 315 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 SMARCD2Q92925 531 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 AK8Q96MA6 479 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 ASB16Q96NS5 453 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 FIZ1Q96SL8 496 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 SEPT5Q99719 369 aaPredicted RBP12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 ASAH2Q9NR71 780 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 RBM12Q9NTZ6 932 aaKnown RBP12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 KCND2Q9NZV8 630 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 CPSF3Q9UKF6 684 aaKnown RBP12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 ODF2LQ9ULJ1 636 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 FAM186AA6NE01 2351 aa12.3□□□□□ -0.44
NDUFA3-208ENST00000422029 ANK1P16157 1881 aa12.29□□□□□ -0.44
NDUFA3-208ENST00000422029 MIA3Q5JRA6 1907 aa12.29□□□□□ -0.44
NDUFA3-208ENST00000422029 MTMR11A4FU01 709 aa12.29□□□□□ -0.44
NDUFA3-208ENST00000422029 GOLGA8IPA6NC78 632 aa12.29□□□□□ -0.44
NDUFA3-208ENST00000422029 MYMKA6NI61 221 aa12.29□□□□□ -0.44
NDUFA3-208ENST00000422029 GOLGA8JA6NMD2 632 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms