RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 EXOC6Q8TAG9 804 aa9.97□□□□□ -0.81
TRIM39-206ENST00000420746 TMEM143Q96AN5 459 aa9.97□□□□□ -0.81
TRIM39-206ENST00000420746 CHFRQ96EP1 664 aa9.97□□□□□ -0.81
TRIM39-206ENST00000420746 UROC1Q96N76 676 aa9.97□□□□□ -0.81
TRIM39-206ENST00000420746 PI4K2AQ9BTU6 479 aa9.97□□□□□ -0.81
TRIM39-206ENST00000420746 LRRC3Q9BY71 257 aa9.97□□□□□ -0.81
TRIM39-206ENST00000420746 CAPN10Q9HC96 672 aa9.97□□□□□ -0.81
TRIM39-206ENST00000420746 TMEM74BQ9NUR3 256 aa9.97□□□□□ -0.81
TRIM39-206ENST00000420746 POLR3BQ9NW08 1133 aaPredicted RBP9.97□□□□□ -0.81
TRIM39-206ENST00000420746 RBM28Q9NW13 759 aaKnown RBP9.97□□□□□ -0.81
TRIM39-206ENST00000420746 AFF4Q9UHB7 1163 aaKnown RBP9.97□□□□□ -0.81
TRIM39-206ENST00000420746 PILRBQ9UKJ0 227 aa9.97□□□□□ -0.81
TRIM39-206ENST00000420746 PCDHB9Q9Y5E1 797 aa9.97□□□□□ -0.81
TRIM39-206ENST00000420746 SLC12A7Q9Y666 1083 aa9.97□□□□□ -0.81
TRIM39-206ENST00000420746 PLXNB3Q9ULL4 1909 aa9.97□□□□□ -0.81
TRIM39-206ENST00000420746 TEX15Q9BXT5 2789 aa9.96□□□□□ -0.81
TRIM39-206ENST00000420746 A0A1W2PRU2 124 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 H7C4K7 107 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 SYN3O14994 580 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 NPTXRO95502 500 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 FGF19O95750 216 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 PRKCBP05771 671 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 SERPINF2P08697 491 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 CYP4F3Q08477 520 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 PLD1Q13393 1074 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 RUNX3Q13761 415 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 TFDP1Q14186 410 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 CD300LGQ6UXG3 332 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 REXO1Q8N1G1 1221 aaKnown RBP9.96□□□□□ -0.82
TRIM39-206ENST00000420746 MINDY1Q8N5J2 469 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 OLIG1Q8TAK6 271 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 SPACA7Q96KW9 195 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 CEP170P1Q96L14 293 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 KIF2CQ99661 725 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 FAM83CQ9BQN1 747 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 ZMYND12Q9H0C1 365 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 IL25Q9H293 177 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 OSBPL3Q9H4L5 887 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 INVSQ9Y283 1065 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 PTPN13Q12923 2485 aa9.96□□□□□ -0.82
TRIM39-206ENST00000420746 ABCA7Q8IZY2 2146 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 PRC1O43663 620 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 GJB3O75712 270 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 DKK1O94907 266 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 P2RY2P41231 377 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 USP11P51784 963 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 NPEPPSP55786 919 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 FUT2Q10981 343 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 MRPL58Q14197 206 aaKnown RBP9.95□□□□□ -0.82
TRIM39-206ENST00000420746 EMC2Q15006 297 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 UPP1Q16831 310 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 LYSMD4Q5XG99 296 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 SGMS1Q86VZ5 419 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 NAXDQ8IW45 347 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 GALNT15Q8N3T1 639 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 PIP4K2CQ8TBX8 421 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 GTPBP2Q9BX10 602 aaKnown RBP9.95□□□□□ -0.82
TRIM39-206ENST00000420746 TPSD1Q9BZJ3 242 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 HPS4Q9NQG7 708 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 ZMYM5Q9UJ78 669 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 TBX20Q9UMR3 447 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 TAF6LQ9Y6J9 622 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 SHROOM3Q8TF72 1996 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 ATMQ13315 3056 aa9.95□□□□□ -0.82
TRIM39-206ENST00000420746 THADAQ6YHU6 1953 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 NUP210Q8TEM1 1887 aaPredicted RBP9.94□□□□□ -0.82
TRIM39-206ENST00000420746 KIF26AQ9ULI4 1882 aaPredicted RBP9.94□□□□□ -0.82
TRIM39-206ENST00000420746 TRABD2BA6NFA1 517 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 ARHGAP33O14559 1287 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 SH3BP5O60239 455 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 RECQL4O94761 1208 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 WISP1O95388 367 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 CFIP05156 583 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 SYPP08247 313 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 MCM5P33992 734 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 PTGER3P43115 390 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 QARSP47897 775 aaKnown RBP9.94□□□□□ -0.82
TRIM39-206ENST00000420746 CLCNKBP51801 687 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 HNRNPUQ00839 825 aaKnown RBP eCLIP9.94□□□□□ -0.82
TRIM39-206ENST00000420746 CAMK2BQ13554 666 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 ARHGAP15Q53QZ3 475 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 STXBP5Q5T5C0 1151 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 PDCD7Q8N8D1 485 aaKnown RBP9.94□□□□□ -0.82
TRIM39-206ENST00000420746 PNPLA1Q8N8W4 532 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 MDGA1Q8NFP4 955 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 BEST2Q8NFU1 509 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 CCDC12Q8WUD4 166 aaPredicted RBP9.94□□□□□ -0.82
TRIM39-206ENST00000420746 WBP1Q96G27 269 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 CCDC136Q96JN2 1154 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 PRIMPOLQ96LW4 560 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 FCRL3Q96P31 734 aaPredicted RBP9.94□□□□□ -0.82
TRIM39-206ENST00000420746 FNBP1Q96RU3 617 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 MTRQ99707 1265 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 P2RY13Q9BPV8 354 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 FBXL5Q9UKA1 691 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 YIPF1Q9Y548 306 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 ASB3Q9Y575 518 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 V9GY48 417 aaPredicted RBP9.94□□□□□ -0.82
TRIM39-206ENST00000420746 PCDH15Q96QU1 1955 aa9.94□□□□□ -0.82
TRIM39-206ENST00000420746 TNRC6BQ9UPQ9 1833 aaKnown RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 709.4 ms