RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 GGA3Q9NZ52 723 aa15.6■□□□□ 0.09
AP000550.1-201ENST00000420508 USP15Q9Y4E8 981 aaPredicted RBP15.6■□□□□ 0.09
AP000550.1-201ENST00000420508 TM4SF1P30408 202 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 PTENP60484 403 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 GUCY1A3Q02108 690 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 NFIL3Q16649 462 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 MFSD14CQ5VZR4 134 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 PPIL6Q8IXY8 311 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 TMEM51Q9NW97 253 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 SRRM3A6NNA2 597 aaPredicted RBP15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 GPD1P21695 349 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 FGFR4P22455 802 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 PTGISQ16647 500 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 ACAD11Q709F0 780 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 SLC30A5Q8TAD4 765 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 HDAC11Q96DB2 347 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 BEGAINQ9BUH8 593 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 TRIM15Q9C019 465 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 DDX4Q9NQI0 724 aaKnown RBP15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 SLITRK3O94933 977 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 ZBTB7AO95365 584 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 CHEK2O96017 543 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 PDGFRAP16234 1089 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 PBX1P40424 430 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 EFHC1Q5JVL4 640 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 MAML1Q92585 1016 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 KCPQ6ZWJ8 1503 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 SNHG28P0DPA3 235 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 CHN1P15882 459 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 RARRES1P49788 294 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 CCNJLQ8IV13 435 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 MCEEQ96PE7 176 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 TMBIM4Q9HC24 238 aa15.59■□□□□ 0.09
AP000550.1-201ENST00000420508 GYG2O15488 501 aa15.58■□□□□ 0.09
AP000550.1-201ENST00000420508 TOMM70O94826 608 aa15.58■□□□□ 0.09
AP000550.1-201ENST00000420508 CETPP11597 493 aa15.58■□□□□ 0.09
AP000550.1-201ENST00000420508 PGM5Q15124 567 aa15.58■□□□□ 0.09
AP000550.1-201ENST00000420508 MPZL3Q6UWV2 235 aa15.58■□□□□ 0.09
AP000550.1-201ENST00000420508 TBC1D1Q86TI0 1168 aaPredicted RBP15.58■□□□□ 0.09
AP000550.1-201ENST00000420508 AGGF1Q8N302 714 aaeCLIP15.58■□□□□ 0.09
AP000550.1-201ENST00000420508 PPM1NQ8N819 430 aa15.58■□□□□ 0.09
AP000550.1-201ENST00000420508 APPL2Q8NEU8 664 aa15.58■□□□□ 0.09
AP000550.1-201ENST00000420508 SDCCAG3Q96C92 435 aa15.58■□□□□ 0.09
AP000550.1-201ENST00000420508 TTC7AQ9ULT0 858 aaPredicted RBP15.58■□□□□ 0.09
AP000550.1-201ENST00000420508 VCAM1P19320 739 aa15.58■□□□□ 0.08
AP000550.1-201ENST00000420508 MAGEA4P43358 317 aa15.58■□□□□ 0.08
AP000550.1-201ENST00000420508 CASP4P49662 377 aa15.58■□□□□ 0.08
AP000550.1-201ENST00000420508 ADCY1Q08828 1119 aa15.58■□□□□ 0.08
AP000550.1-201ENST00000420508 NFX1Q12986 1120 aaKnown RBP15.58■□□□□ 0.08
AP000550.1-201ENST00000420508 UGP2Q16851 508 aa15.58■□□□□ 0.08
AP000550.1-201ENST00000420508 NDUFAF2Q8N183 169 aa15.58■□□□□ 0.08
AP000550.1-201ENST00000420508 DHX35Q9H5Z1 703 aaKnown RBP15.58■□□□□ 0.08
AP000550.1-201ENST00000420508 PROSCO94903 275 aa15.58■□□□□ 0.08
AP000550.1-201ENST00000420508 BMP6P22004 513 aa15.58■□□□□ 0.08
AP000550.1-201ENST00000420508 DSG3P32926 999 aa15.58■□□□□ 0.08
AP000550.1-201ENST00000420508 CLEC16AQ2KHT3 1053 aa15.58■□□□□ 0.08
AP000550.1-201ENST00000420508 ZPBP2Q6X784 338 aa15.58■□□□□ 0.08
AP000550.1-201ENST00000420508 PGBD4Q96DM1 585 aa15.58■□□□□ 0.08
AP000550.1-201ENST00000420508 VDRP11473 427 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 DDR1Q08345 913 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 PDK2Q15119 407 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 TEDDM1Q5T9Z0 273 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 LRRC55Q6ZSA7 311 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 DDX23Q9BUQ8 820 aaKnown RBP15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 ELP3Q9H9T3 547 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 CCNG2Q16589 344 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 GPAT2Q6NUI2 795 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 NT5DC4Q86YG4 428 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 C4orf32Q8N8J7 132 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 GPRC5AQ8NFJ5 357 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 FAM86B1E9PN63 330 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 FAM86B2P0C5J1 330 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 SETSIPP0DME0 302 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 ICE2Q659A1 982 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 ERO1BQ86YB8 467 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 TARS2Q9BW92 718 aaKnown RBP15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 DRC3Q9H069 523 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 FBXO28Q9NVF7 368 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 SCOCQ9UIL1 159 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 SAT1P21673 171 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 ITIH4Q14624 930 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 TAF11Q15544 211 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 NUDCD3Q8IVD9 361 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 MAP4K3Q8IVH8 894 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 PARP9Q8IXQ6 854 aa15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 XAB2Q9HCS7 855 aaKnown RBP15.57■□□□□ 0.08
AP000550.1-201ENST00000420508 NKRFO15226 690 aaKnown RBP eCLIP15.56■□□□□ 0.08
AP000550.1-201ENST00000420508 ABL1P00519 1130 aa15.56■□□□□ 0.08
AP000550.1-201ENST00000420508 ITGA8P53708 1063 aa15.56■□□□□ 0.08
AP000550.1-201ENST00000420508 LMBRD2Q68DH5 695 aaPredicted RBP15.56■□□□□ 0.08
AP000550.1-201ENST00000420508 SH3TC2Q8TF17 1288 aa15.56■□□□□ 0.08
AP000550.1-201ENST00000420508 PPARGC1AQ9UBK2 798 aaKnown RBP15.56■□□□□ 0.08
AP000550.1-201ENST00000420508 TCF7P36402 384 aaPredicted RBP15.56■□□□□ 0.08
AP000550.1-201ENST00000420508 HSD17B4P51659 736 aa15.56■□□□□ 0.08
AP000550.1-201ENST00000420508 ART3Q13508 389 aa15.56■□□□□ 0.08
AP000550.1-201ENST00000420508 NOTUMQ6P988 496 aa15.56■□□□□ 0.08
AP000550.1-201ENST00000420508 CBWD2Q8IUF1 395 aa15.56■□□□□ 0.08
AP000550.1-201ENST00000420508 DNAJC19Q96DA6 116 aa15.56■□□□□ 0.08
AP000550.1-201ENST00000420508 PRDM16Q9HAZ2 1276 aa15.56■□□□□ 0.08
AP000550.1-201ENST00000420508 UBQLN1Q9UMX0 589 aaKnown RBP15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms