RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 AGO2Q9UKV8 859 aaKnown RBP23.15■■□□□ 1.3
PTPN4-202ENST00000420482 OR6C75A6NL08 312 aa23.14■■□□□ 1.29
PTPN4-202ENST00000420482 MICAL2O94851 1124 aa23.14■■□□□ 1.29
PTPN4-202ENST00000420482 ODC1P11926 461 aa23.14■■□□□ 1.29
PTPN4-202ENST00000420482 STAT6P42226 847 aa23.14■■□□□ 1.29
PTPN4-202ENST00000420482 AARSP49588 968 aaKnown RBP eCLIP23.14■■□□□ 1.29
PTPN4-202ENST00000420482 PLD1Q13393 1074 aa23.14■■□□□ 1.29
PTPN4-202ENST00000420482 SLC39A14Q15043 492 aa23.14■■□□□ 1.29
PTPN4-202ENST00000420482 ZC2HC1CQ53FD0 456 aaPredicted RBP23.14■■□□□ 1.29
PTPN4-202ENST00000420482 JADE1Q6IE81 842 aa23.14■■□□□ 1.29
PTPN4-202ENST00000420482 USP49Q70CQ1 688 aa23.14■■□□□ 1.29
PTPN4-202ENST00000420482 SFR1Q86XK3 245 aa23.14■■□□□ 1.29
PTPN4-202ENST00000420482 PI15O43692 258 aa23.13■■□□□ 1.29
PTPN4-202ENST00000420482 PDIA4P13667 645 aaKnown RBP23.13■■□□□ 1.29
PTPN4-202ENST00000420482 TYMPP19971 482 aa23.13■■□□□ 1.29
PTPN4-202ENST00000420482 ALCAMQ13740 583 aa23.13■■□□□ 1.29
PTPN4-202ENST00000420482 ZBTB41Q5SVQ8 909 aa23.13■■□□□ 1.29
PTPN4-202ENST00000420482 ARMCX5Q6P1M9 558 aa23.13■■□□□ 1.29
PTPN4-202ENST00000420482 FAM173BQ6P4H8 233 aa23.13■■□□□ 1.29
PTPN4-202ENST00000420482 DTWD2Q8NBA8 298 aa23.13■■□□□ 1.29
PTPN4-202ENST00000420482 ING5Q8WYH8 240 aa23.13■■□□□ 1.29
PTPN4-202ENST00000420482 POMGNT1Q8WZA1 660 aa23.13■■□□□ 1.29
PTPN4-202ENST00000420482 CLIC6Q96NY7 704 aa23.13■■□□□ 1.29
PTPN4-202ENST00000420482 LRRC27Q9C0I9 530 aa23.13■■□□□ 1.29
PTPN4-202ENST00000420482 MTMR6Q9Y217 621 aa23.13■■□□□ 1.29
PTPN4-202ENST00000420482 SIT1Q9Y3P8 196 aa23.13■■□□□ 1.29
PTPN4-202ENST00000420482 C2CD2Q9Y426 696 aa23.13■■□□□ 1.29
PTPN4-202ENST00000420482 PCDHB13Q9Y5F0 798 aa23.13■■□□□ 1.29
PTPN4-202ENST00000420482 STYXL1Q9Y6J8 313 aa23.13■■□□□ 1.29
PTPN4-202ENST00000420482 ECI2O75521 394 aa23.12■■□□□ 1.29
PTPN4-202ENST00000420482 ACOT2P49753 483 aa23.12■■□□□ 1.29
PTPN4-202ENST00000420482 LILRA4P59901 499 aa23.12■■□□□ 1.29
PTPN4-202ENST00000420482 GPC5P78333 572 aa23.12■■□□□ 1.29
PTPN4-202ENST00000420482 STK38Q15208 465 aa23.12■■□□□ 1.29
PTPN4-202ENST00000420482 OVOS1Q6IE37 1185 aa23.12■■□□□ 1.29
PTPN4-202ENST00000420482 SLC39A4Q6P5W5 647 aa23.12■■□□□ 1.29
PTPN4-202ENST00000420482 ASCL5Q7RTU5 278 aa23.12■■□□□ 1.29
PTPN4-202ENST00000420482 MCRS1Q96EZ8 462 aa23.12■■□□□ 1.29
PTPN4-202ENST00000420482 ZNF396Q96N95 335 aaPredicted RBP23.12■■□□□ 1.29
PTPN4-202ENST00000420482 ACCSQ96QU6 501 aa23.12■■□□□ 1.29
PTPN4-202ENST00000420482 USP28Q96RU2 1077 aa23.12■■□□□ 1.29
PTPN4-202ENST00000420482 FOXD4L1Q9NU39 408 aa23.12■■□□□ 1.29
PTPN4-202ENST00000420482 DSEQ9UL01 958 aa23.12■■□□□ 1.29
PTPN4-202ENST00000420482 TIMM13Q9Y5L4 95 aaPredicted RBP23.12■■□□□ 1.29
PTPN4-202ENST00000420482 VPS13AQ96RL7 3174 aa23.11■■□□□ 1.29
PTPN4-202ENST00000420482 PRR23AA6NEV1 266 aa23.11■■□□□ 1.29
PTPN4-202ENST00000420482 ANKRD63C9JTQ0 380 aa23.11■■□□□ 1.29
PTPN4-202ENST00000420482 IL18RAPO95256 599 aa23.11■■□□□ 1.29
PTPN4-202ENST00000420482 SEC24AO95486 1093 aa23.11■■□□□ 1.29
PTPN4-202ENST00000420482 IDEP14735 1019 aa23.11■■□□□ 1.29
PTPN4-202ENST00000420482 PRKCQQ04759 706 aa23.11■■□□□ 1.29
PTPN4-202ENST00000420482 TWF1Q12792 350 aa23.11■■□□□ 1.29
PTPN4-202ENST00000420482 MYBPC2Q14324 1141 aa23.11■■□□□ 1.29
PTPN4-202ENST00000420482 RNF19BQ6ZMZ0 732 aa23.11■■□□□ 1.29
PTPN4-202ENST00000420482 NT5DC4Q86YG4 428 aa23.11■■□□□ 1.29
PTPN4-202ENST00000420482 ST13P5Q8NFI4 369 aaPredicted RBP23.11■■□□□ 1.29
PTPN4-202ENST00000420482 KXD1Q9BQD3 176 aa23.11■■□□□ 1.29
PTPN4-202ENST00000420482 RPP25Q9BUL9 199 aaKnown RBP23.11■■□□□ 1.29
PTPN4-202ENST00000420482 ASAH2Q9NR71 780 aa23.11■■□□□ 1.29
PTPN4-202ENST00000420482 OLFML3Q9NRN5 406 aa23.11■■□□□ 1.29
PTPN4-202ENST00000420482 DOCK6Q96HP0 2047 aa23.11■■□□□ 1.29
PTPN4-202ENST00000420482 MYMKA6NI61 221 aa23.1■■□□□ 1.29
PTPN4-202ENST00000420482 GCNT3O95395 438 aa23.1■■□□□ 1.29
PTPN4-202ENST00000420482 LDHAP00338 332 aaKnown RBP23.1■■□□□ 1.29
PTPN4-202ENST00000420482 HSP90AA1P07900 732 aaKnown RBP23.1■■□□□ 1.29
PTPN4-202ENST00000420482 ALDH1A3P47895 512 aa23.1■■□□□ 1.29
PTPN4-202ENST00000420482 GPR17Q13304 367 aa23.1■■□□□ 1.29
PTPN4-202ENST00000420482 ANGPT1Q15389 498 aa23.1■■□□□ 1.29
PTPN4-202ENST00000420482 SLC5A9Q2M3M2 681 aa23.1■■□□□ 1.29
PTPN4-202ENST00000420482 C9orf57Q5W0N0 161 aa23.1■■□□□ 1.29
PTPN4-202ENST00000420482 STXBP4Q6ZWJ1 553 aa23.1■■□□□ 1.29
PTPN4-202ENST00000420482 METTL23Q86XA0 190 aa23.1■■□□□ 1.29
PTPN4-202ENST00000420482 SYCP3Q8IZU3 236 aa23.1■■□□□ 1.29
PTPN4-202ENST00000420482 ELSPBP1Q96BH3 223 aa23.1■■□□□ 1.29
PTPN4-202ENST00000420482 SENP8Q96LD8 212 aa23.1■■□□□ 1.29
PTPN4-202ENST00000420482 DMDP11532 3685 aa23.1■■□□□ 1.29
PTPN4-202ENST00000420482 NFICP08651 508 aa23.09■■□□□ 1.29
PTPN4-202ENST00000420482 CEBPBP17676 345 aa23.09■■□□□ 1.29
PTPN4-202ENST00000420482 NASPP49321 788 aaPredicted RBP23.09■■□□□ 1.29
PTPN4-202ENST00000420482 GUCY2FP51841 1108 aa23.09■■□□□ 1.29
PTPN4-202ENST00000420482 EPHB3P54753 998 aa23.09■■□□□ 1.29
PTPN4-202ENST00000420482 STARD6P59095 220 aa23.09■■□□□ 1.29
PTPN4-202ENST00000420482 PRSS36Q5K4E3 855 aa23.09■■□□□ 1.29
PTPN4-202ENST00000420482 L1TD1Q5T7N2 865 aaKnown RBP23.09■■□□□ 1.29
PTPN4-202ENST00000420482 DNAJC19Q96DA6 116 aa23.09■■□□□ 1.29
PTPN4-202ENST00000420482 GPR88Q9GZN0 384 aa23.09■■□□□ 1.29
PTPN4-202ENST00000420482 ZFP14Q9HCL3 533 aa23.09■■□□□ 1.29
PTPN4-202ENST00000420482 DPP3Q9NY33 737 aa23.09■■□□□ 1.29
PTPN4-202ENST00000420482 MYH15Q9Y2K3 1946 aa23.09■■□□□ 1.29
PTPN4-202ENST00000420482 GVINP1Q7Z2Y8 2422 aa23.09■■□□□ 1.29
PTPN4-202ENST00000420482 PIRO00625 290 aa23.08■■□□□ 1.29
PTPN4-202ENST00000420482 PPP1R37O75864 691 aa23.08■■□□□ 1.29
PTPN4-202ENST00000420482 TAF6P49848 677 aa23.08■■□□□ 1.29
PTPN4-202ENST00000420482 SNW1Q13573 536 aaKnown RBP23.08■■□□□ 1.29
PTPN4-202ENST00000420482 MLF2Q15773 248 aaPredicted RBP23.08■■□□□ 1.29
PTPN4-202ENST00000420482 SLC44A4Q53GD3 710 aa23.08■■□□□ 1.29
PTPN4-202ENST00000420482 CCDC65Q8IXS2 484 aa23.08■■□□□ 1.29
PTPN4-202ENST00000420482 THEM5Q8N1Q8 247 aa23.08■■□□□ 1.29
PTPN4-202ENST00000420482 PANK2Q9BZ23 570 aa23.08■■□□□ 1.29
PTPN4-202ENST00000420482 TMEM206Q9H813 350 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms