RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 DUSP28Q4G0W2 176 aa15.75■□□□□ 0.11
SEMA4D-204ENST00000420101 IER5Q5VY09 327 aa15.75■□□□□ 0.11
SEMA4D-204ENST00000420101 APBB1IPQ7Z5R6 666 aaPredicted RBP15.75■□□□□ 0.11
SEMA4D-204ENST00000420101 SLFN11Q7Z7L1 901 aa15.75■□□□□ 0.11
SEMA4D-204ENST00000420101 TRAPPC12Q8WVT3 735 aa15.75■□□□□ 0.11
SEMA4D-204ENST00000420101 SLC35C1Q96A29 364 aa15.75■□□□□ 0.11
SEMA4D-204ENST00000420101 ZNF570Q96NI8 536 aa15.75■□□□□ 0.11
SEMA4D-204ENST00000420101 ZIC5Q96T25 663 aa15.75■□□□□ 0.11
SEMA4D-204ENST00000420101 KATNBL1Q9H079 304 aa15.75■□□□□ 0.11
SEMA4D-204ENST00000420101 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.75■□□□□ 0.11
SEMA4D-204ENST00000420101 MCM3APO60318 1980 aa15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 MYH9P35579 1960 aaKnown RBP15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 CEP104O60308 925 aa15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 SNX3O60493 162 aa15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 ATP2C2O75185 946 aa15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 GFPT2O94808 682 aa15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 TRIM49P0CI25 452 aa15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 TRIM49CP0CI26 452 aa15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 NCALDP61601 193 aa15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 ROR2Q01974 943 aaKnown RBP15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 BFSP1Q12934 665 aa15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 DHX34Q14147 1143 aaKnown RBP15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 TRADDQ15628 312 aa15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 SGSM1Q2NKQ1 1148 aa15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 INTS8Q75QN2 995 aaKnown RBP15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 C12orf56Q8IXR9 622 aa15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 LMNTD2Q8IXW0 634 aa15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 LRRC57Q8N9N7 239 aa15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 PSPC1Q8WXF1 523 aaKnown RBP15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 ROPN1BQ9BZX4 212 aaPredicted RBP15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 ROPN1Q9HAT0 212 aaPredicted RBP15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 ARHGAP28Q9P2N2 729 aa15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 NOC2LQ9Y3T9 749 aaKnown RBP15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 USP15Q9Y4E8 981 aaPredicted RBP15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 LRRC42Q9Y546 428 aa15.74■□□□□ 0.11
SEMA4D-204ENST00000420101 PLXNA1Q9UIW2 1896 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 DYNC1LI2O43237 492 aaPredicted RBP15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 CA12O43570 354 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 GAS2O43903 313 aaKnown RBP15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 DIAPH2O60879 1101 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 NPTXRO95502 500 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 SRGAP2CP0DJJ0 459 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 RARAP10276 462 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 TM4SF4P48230 202 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 KLHL30Q0D2K2 578 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 ASIC2Q16515 512 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 DENND2CQ68D51 928 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 GPIHBP1Q8IV16 184 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 PRPF31Q8WWY3 499 aaKnown RBP15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 SOCS4Q8WXH5 440 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 ITFG2Q969R8 447 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 RNPEPQ9H4A4 650 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 GCNT4Q9P109 453 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 RGS16O15492 202 aaPredicted RBP15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 DAPK3O43293 454 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 TOMM70O94826 608 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 HSPA6P17066 643 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 IBSPP21815 317 aaPredicted RBP15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 VAMP7P51809 220 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 MXD4Q14582 209 aaPredicted RBP15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 CCL14Q16627 93 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 DGKDQ16760 1214 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 SLC5A9Q2M3M2 681 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 BRDTQ58F21 947 aaPredicted RBP15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 TNFAIP8L3Q5GJ75 292 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 EFCAB12Q6NXP0 572 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 RHPN2Q8IUC4 686 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 EMID1Q96A84 441 aaPredicted RBP15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 GRAMD1AQ96CP6 724 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 KLHL29Q96CT2 875 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 BORCS6Q96GS4 357 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 NAF1Q96HR8 494 aaKnown RBP15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 APBA2Q99767 749 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 NEUROG2Q9H2A3 272 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 FLRT1Q9NZU1 646 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 RASAL2Q9UJF2 1139 aa15.73■□□□□ 0.11
SEMA4D-204ENST00000420101 ARID2Q68CP9 1835 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 MMP3P08254 477 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 ACTN1P12814 892 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 INSRRP14616 1297 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 SLC9A1P19634 815 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 ATP5DP30049 168 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 MSH2P43246 934 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 FMO5P49326 533 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 MYL7Q01449 175 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 POU5F1Q01860 360 aaKnown RBP15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 CETN1Q12798 172 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 CAPSQ13938 189 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 TMEM132AQ24JP5 1023 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 PARP6Q2NL67 630 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 ZNF484Q5JVG2 852 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 ANKRD20A2Q5SQ80 823 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 ANKRD20A1Q5TYW2 823 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 ANKRD20A3Q5VUR7 823 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 CWF19L1Q69YN2 538 aaKnown RBP15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 MFSD5Q6N075 450 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 VPS36Q86VN1 386 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 ZBTB8OSQ8IWT0 167 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 LRRC34Q8IZ02 419 aa15.72■□□□□ 0.11
SEMA4D-204ENST00000420101 RNF149Q8NC42 400 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms