RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 DPP3Q9NY33 737 aa22■■□□□ 1.11
GTF3A-202ENST00000419181 TSC2P49815 1807 aa22■■□□□ 1.11
GTF3A-202ENST00000419181 WDR27A2RRH5 827 aa21.99■■□□□ 1.11
GTF3A-202ENST00000419181 SPTLC1O15269 473 aa21.99■■□□□ 1.11
GTF3A-202ENST00000419181 TGFB1I1O43294 461 aa21.99■■□□□ 1.11
GTF3A-202ENST00000419181 ABLIM3O94929 683 aa21.99■■□□□ 1.11
GTF3A-202ENST00000419181 OAZ2O95190 189 aa21.99■■□□□ 1.11
GTF3A-202ENST00000419181 HNRNPA1P09651 372 aaKnown RBP eCLIP21.99■■□□□ 1.11
GTF3A-202ENST00000419181 PAX3P23760 479 aa21.99■■□□□ 1.11
GTF3A-202ENST00000419181 CTXN3Q4LDR2 81 aa21.99■■□□□ 1.11
GTF3A-202ENST00000419181 ZNF461Q8TAF7 563 aa21.99■■□□□ 1.11
GTF3A-202ENST00000419181 SLC7A14Q8TBB6 771 aa21.99■■□□□ 1.11
GTF3A-202ENST00000419181 AGPAT3Q9NRZ7 376 aa21.99■■□□□ 1.11
GTF3A-202ENST00000419181 RAPGEFL1Q9UHV5 662 aa21.99■■□□□ 1.11
GTF3A-202ENST00000419181 CLUHO75153 1309 aa21.99■■□□□ 1.11
GTF3A-202ENST00000419181 DOCK6Q96HP0 2047 aa21.98■■□□□ 1.11
GTF3A-202ENST00000419181 YWHAHQ04917 246 aaPredicted RBP21.98■■□□□ 1.11
GTF3A-202ENST00000419181 UVSSAQ2YD98 709 aa21.98■■□□□ 1.11
GTF3A-202ENST00000419181 PPM1LQ5SGD2 360 aa21.98■■□□□ 1.11
GTF3A-202ENST00000419181 DSTYKQ6XUX3 929 aa21.98■■□□□ 1.11
GTF3A-202ENST00000419181 RTL10Q7L3V2 364 aa21.98■■□□□ 1.11
GTF3A-202ENST00000419181 OTOP3Q7RTS5 596 aa21.98■■□□□ 1.11
GTF3A-202ENST00000419181 NELFCDQ8IXH7 590 aa21.98■■□□□ 1.11
GTF3A-202ENST00000419181 ZDHHC14Q8IZN3 488 aa21.98■■□□□ 1.11
GTF3A-202ENST00000419181 PIDD1Q9HB75 910 aa21.98■■□□□ 1.11
GTF3A-202ENST00000419181 HSPBP1Q9NZL4 362 aa21.98■■□□□ 1.11
GTF3A-202ENST00000419181 TIMM13Q9Y5L4 95 aaPredicted RBP21.98■■□□□ 1.11
GTF3A-202ENST00000419181 DOCK8Q8NF50 2099 aa21.97■■□□□ 1.11
GTF3A-202ENST00000419181 MYO10Q9HD67 2058 aa21.97■■□□□ 1.11
GTF3A-202ENST00000419181 POU2F2P09086 479 aa21.97■■□□□ 1.11
GTF3A-202ENST00000419181 TYMPP19971 482 aa21.97■■□□□ 1.11
GTF3A-202ENST00000419181 SNRPFP62306 86 aaKnown RBP21.97■■□□□ 1.11
GTF3A-202ENST00000419181 KMT5BQ4FZB7 885 aa21.97■■□□□ 1.11
GTF3A-202ENST00000419181 PLCD3Q8N3E9 789 aa21.97■■□□□ 1.11
GTF3A-202ENST00000419181 NOC3LQ8WTT2 800 aaKnown RBP21.97■■□□□ 1.11
GTF3A-202ENST00000419181 SENP8Q96LD8 212 aa21.97■■□□□ 1.11
GTF3A-202ENST00000419181 PDE11AQ9HCR9 933 aa21.97■■□□□ 1.11
GTF3A-202ENST00000419181 EXOC1Q9NV70 894 aa21.97■■□□□ 1.11
GTF3A-202ENST00000419181 TECTAO75443 2155 aa21.97■■□□□ 1.11
GTF3A-202ENST00000419181 PRR33A8MZF0 331 aa21.96■■□□□ 1.11
GTF3A-202ENST00000419181 N4BP1O75113 896 aaKnown RBP21.96■■□□□ 1.11
GTF3A-202ENST00000419181 ATF2P15336 505 aa21.96■■□□□ 1.11
GTF3A-202ENST00000419181 TAF6P49848 677 aa21.96■■□□□ 1.11
GTF3A-202ENST00000419181 ARPP19P56211 112 aa21.96■■□□□ 1.11
GTF3A-202ENST00000419181 TFAMQ00059 246 aaKnown RBP21.96■■□□□ 1.11
GTF3A-202ENST00000419181 STK4Q13043 487 aa21.96■■□□□ 1.11
GTF3A-202ENST00000419181 PTPN21Q16825 1174 aa21.96■■□□□ 1.11
GTF3A-202ENST00000419181 TPGS2Q68CL5 300 aa21.96■■□□□ 1.11
GTF3A-202ENST00000419181 KRBA2Q6ZNG9 492 aa21.96■■□□□ 1.11
GTF3A-202ENST00000419181 HS2ST1Q7LGA3 356 aa21.96■■□□□ 1.11
GTF3A-202ENST00000419181 CBWD2Q8IUF1 395 aa21.96■■□□□ 1.11
GTF3A-202ENST00000419181 KIAA0895Q8NCT3 520 aa21.96■■□□□ 1.11
GTF3A-202ENST00000419181 EDAQ92838 391 aa21.96■■□□□ 1.11
GTF3A-202ENST00000419181 ACSF2Q96CM8 615 aaPredicted RBP21.96■■□□□ 1.11
GTF3A-202ENST00000419181 OXCT2Q9BYC2 517 aaPredicted RBP21.96■■□□□ 1.11
GTF3A-202ENST00000419181 KIAA1586Q9HCI6 787 aa21.96■■□□□ 1.11
GTF3A-202ENST00000419181 ZNF233A6NK53 670 aa21.95■■□□□ 1.1
GTF3A-202ENST00000419181 ODC1P11926 461 aa21.95■■□□□ 1.1
GTF3A-202ENST00000419181 PSMD2Q13200 908 aa21.95■■□□□ 1.1
GTF3A-202ENST00000419181 KNOP1Q1ED39 458 aaKnown RBP21.95■■□□□ 1.1
GTF3A-202ENST00000419181 USP37Q86T82 979 aa21.95■■□□□ 1.1
GTF3A-202ENST00000419181 C1orf127Q8N9H9 656 aa21.95■■□□□ 1.1
GTF3A-202ENST00000419181 CXorf38Q8TB03 319 aa21.95■■□□□ 1.1
GTF3A-202ENST00000419181 CGNQ9P2M7 1197 aaKnown RBP21.95■■□□□ 1.1
GTF3A-202ENST00000419181 HCN4Q9Y3Q4 1203 aa21.95■■□□□ 1.1
GTF3A-202ENST00000419181 ARHGEF37A1IGU5 675 aa21.94■■□□□ 1.1
GTF3A-202ENST00000419181 CCL16O15467 120 aa21.94■■□□□ 1.1
GTF3A-202ENST00000419181 XYLBO75191 536 aa21.94■■□□□ 1.1
GTF3A-202ENST00000419181 ZNF202O95125 648 aa21.94■■□□□ 1.1
GTF3A-202ENST00000419181 RPN1P04843 607 aaKnown RBP21.94■■□□□ 1.1
GTF3A-202ENST00000419181 CYP11A1P05108 521 aa21.94■■□□□ 1.1
GTF3A-202ENST00000419181 PRR29P0C7W0 189 aa21.94■■□□□ 1.1
GTF3A-202ENST00000419181 ZXDAP98168 799 aa21.94■■□□□ 1.1
GTF3A-202ENST00000419181 OVOS1Q6IE37 1185 aa21.94■■□□□ 1.1
GTF3A-202ENST00000419181 C12orf56Q8IXR9 622 aa21.94■■□□□ 1.1
GTF3A-202ENST00000419181 TCEAL8Q8IYN2 117 aa21.94■■□□□ 1.1
GTF3A-202ENST00000419181 CACTINQ8WUQ7 758 aaKnown RBP21.94■■□□□ 1.1
GTF3A-202ENST00000419181 BORCS6Q96GS4 357 aa21.94■■□□□ 1.1
GTF3A-202ENST00000419181 FAM84AQ96KN4 292 aa21.94■■□□□ 1.1
GTF3A-202ENST00000419181 AFF4Q9UHB7 1163 aaKnown RBP21.94■■□□□ 1.1
GTF3A-202ENST00000419181 OR6C75A6NL08 312 aa21.93■■□□□ 1.1
GTF3A-202ENST00000419181 TULP1O00294 542 aaPredicted RBP21.93■■□□□ 1.1
GTF3A-202ENST00000419181 CLIC2O15247 247 aa21.93■■□□□ 1.1
GTF3A-202ENST00000419181 SEC24AO95486 1093 aa21.93■■□□□ 1.1
GTF3A-202ENST00000419181 ITGB3P05106 788 aa21.93■■□□□ 1.1
GTF3A-202ENST00000419181 CPB1P15086 417 aa21.93■■□□□ 1.1
GTF3A-202ENST00000419181 POLR2BP30876 1174 aaKnown RBP21.93■■□□□ 1.1
GTF3A-202ENST00000419181 ELF1P32519 619 aa21.93■■□□□ 1.1
GTF3A-202ENST00000419181 PNPLA4P41247 253 aa21.93■■□□□ 1.1
GTF3A-202ENST00000419181 DPYDQ12882 1025 aa21.93■■□□□ 1.1
GTF3A-202ENST00000419181 PTPRJQ12913 1337 aa21.93■■□□□ 1.1
GTF3A-202ENST00000419181 SURF1Q15526 300 aa21.93■■□□□ 1.1
GTF3A-202ENST00000419181 SNRNP35Q16560 246 aaKnown RBP21.93■■□□□ 1.1
GTF3A-202ENST00000419181 SV2CQ496J9 727 aa21.93■■□□□ 1.1
GTF3A-202ENST00000419181 GRASPQ7Z6J2 395 aaPredicted RBP21.93■■□□□ 1.1
GTF3A-202ENST00000419181 XXYLT1Q8NBI6 393 aa21.93■■□□□ 1.1
GTF3A-202ENST00000419181 ZNF560Q96MR9 790 aa21.93■■□□□ 1.1
GTF3A-202ENST00000419181 NOTCH4Q99466 2003 aa21.93■■□□□ 1.1
GTF3A-202ENST00000419181 MTMR12Q9C0I1 747 aa21.93■■□□□ 1.1
GTF3A-202ENST00000419181 LIMD1Q9UGP4 676 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms