RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 PCDHB4Q9Y5E5 795 aa16.08■□□□□ 0.17
SEMA3B-203ENST00000419007 ADGRA3Q8IWK6 1321 aa16.08■□□□□ 0.16
SEMA3B-203ENST00000419007 WDR64B1ANS9 1081 aa16.08■□□□□ 0.16
SEMA3B-203ENST00000419007 PMM2O15305 246 aa16.08■□□□□ 0.16
SEMA3B-203ENST00000419007 DSG3P32926 999 aa16.08■□□□□ 0.16
SEMA3B-203ENST00000419007 RPS6P62753 249 aaKnown RBP16.08■□□□□ 0.16
SEMA3B-203ENST00000419007 CRYMQ14894 314 aa16.08■□□□□ 0.16
SEMA3B-203ENST00000419007 C4orf19Q8IY42 314 aa16.08■□□□□ 0.16
SEMA3B-203ENST00000419007 BBOF1Q8ND07 529 aa16.08■□□□□ 0.16
SEMA3B-203ENST00000419007 ST6GALNAC4Q9H4F1 302 aa16.08■□□□□ 0.16
SEMA3B-203ENST00000419007 TRABDQ9H4I3 376 aa16.08■□□□□ 0.16
SEMA3B-203ENST00000419007 DNPEPQ9ULA0 475 aa16.08■□□□□ 0.16
SEMA3B-203ENST00000419007 PHTF1Q9UMS5 762 aa16.08■□□□□ 0.16
SEMA3B-203ENST00000419007 ZBTB12Q9Y330 459 aaPredicted RBP16.08■□□□□ 0.16
SEMA3B-203ENST00000419007 RNASELQ05823 741 aaKnown RBP16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 GPS1Q13098 491 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 PKN2Q16513 984 aaKnown RBP16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 PCNX4Q63HM2 1172 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 TMC2Q8TDI7 906 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 SYTL5Q8TDW5 730 aaPredicted RBP16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 CFAP57Q96MR6 1250 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 RMDN3Q96TC7 470 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 ZNF70Q9UC06 446 aaPredicted RBP16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 UBIAD1Q9Y5Z9 338 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 UNC5CO95185 931 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 ATP2A2P16615 1042 aaKnown RBP16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 CETN2P41208 172 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 ARSEP51690 589 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 SNRPFP62306 86 aaKnown RBP16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 GCNT1Q02742 428 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 TRIM11Q96F44 468 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 MFSD14AQ96MC6 490 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 LRRC37BQ96QE4 947 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 AVENQ9NQS1 362 aaPredicted RBP16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 GABBR1Q9UBS5 961 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 LGALS13Q9UHV8 139 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 ZNF536O15090 1300 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 WDR91A4D1P6 747 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 SPDYE2BA6NHP3 402 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 KIF1CO43896 1103 aaKnown RBP16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 HLA-DRAP01903 254 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 POTEJP0CG39 1038 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 SPDYE6P0CI01 402 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 FKBP1AP62942 108 aaKnown RBP16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 KLF1Q13351 362 aaPredicted RBP16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 ZBED8Q8IZ13 594 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 MICAL1Q8TDZ2 1067 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 CLEC4DQ8WXI8 215 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 ZNF516Q92618 1163 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 SMC6Q96SB8 1091 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 FAM167BQ9BTA0 163 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 SYNPO2Q9UMS6 1093 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 SLX4Q8IY92 1834 aa16.07■□□□□ 0.16
SEMA3B-203ENST00000419007 ANKRD31Q8N7Z5 1873 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 YDJCA8MPS7 323 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 MYBL1P10243 752 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 HARSP12081 509 aaKnown RBP16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 TCF4P15884 667 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 GNA15P30679 374 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 LIG4P49917 911 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 TRIM68Q6AZZ1 485 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 MCF2L2Q86YR7 1114 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 ANKMY2Q8IV38 441 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 OGFOD1Q8N543 542 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 ANKLE1Q8NAG6 615 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 LRRC8CQ8TDW0 803 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 ZNF570Q96NI8 536 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 RBBP6Q7Z6E9 1792 aaKnown RBP16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 UMODL1Q5DID0 1318 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 PECAM1P16284 738 aaPredicted RBP16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 RPA3P35244 121 aaPredicted RBP16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 SPARCL1Q14515 664 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 HHATQ5VTY9 493 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 RNF43Q68DV7 783 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 ASRGL1Q7L266 308 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 FAM151AQ8WW52 585 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 SLC24A3Q9HC58 644 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 KIAA1586Q9HCI6 787 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 TXLNGQ9NUQ3 528 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 ZNFX1Q9P2E3 1918 aaKnown RBP16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 NRXN2Q9P2S2 1712 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 BANF1O75531 89 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 TCEA3O75764 348 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 KRT1P04264 644 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 RPL7AP62424 266 aaKnown RBP16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 NOP14P78316 857 aaKnown RBP16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 NFX1Q12986 1120 aaKnown RBP16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 MAMLD1Q13495 774 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 ARHGEF16Q5VV41 709 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 ENOSF1Q7L5Y1 443 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 GRAMD1AQ96CP6 724 aa16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 RAB3IPQ96QF0 476 aaPredicted RBP16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 MRPL47Q9HD33 250 aaKnown RBP16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 SEPT9Q9UHD8 586 aaPredicted RBP16.06■□□□□ 0.16
SEMA3B-203ENST00000419007 LYPLA2O95372 231 aa16.05■□□□□ 0.16
SEMA3B-203ENST00000419007 ALADP13716 330 aa16.05■□□□□ 0.16
SEMA3B-203ENST00000419007 BPIFB4P59827 614 aa16.05■□□□□ 0.16
SEMA3B-203ENST00000419007 MON1BQ7L1V2 547 aa16.05■□□□□ 0.16
SEMA3B-203ENST00000419007 NLRX1Q86UT6 975 aa16.05■□□□□ 0.16
SEMA3B-203ENST00000419007 TRABD2AQ86V40 505 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms