RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 USP37Q86T82 979 aa17.84■□□□□ 0.45
LINC00404-201ENST00000418660 FBXL6Q8N531 539 aa17.84■□□□□ 0.45
LINC00404-201ENST00000418660 HPS3Q969F9 1004 aa17.84■□□□□ 0.45
LINC00404-201ENST00000418660 NXPE3Q969Y0 559 aa17.84■□□□□ 0.45
LINC00404-201ENST00000418660 SAAL1Q96ER3 474 aa17.84■□□□□ 0.45
LINC00404-201ENST00000418660 DPP3Q9NY33 737 aa17.84■□□□□ 0.45
LINC00404-201ENST00000418660 TIMM13Q9Y5L4 95 aaPredicted RBP17.84■□□□□ 0.45
LINC00404-201ENST00000418660 ZFP37Q9Y6Q3 630 aaPredicted RBP17.84■□□□□ 0.45
LINC00404-201ENST00000418660 PRRG1O14668 218 aa17.83■□□□□ 0.44
LINC00404-201ENST00000418660 EIF3DO15371 548 aaKnown RBP eCLIP17.83■□□□□ 0.44
LINC00404-201ENST00000418660 EXTL3O43909 919 aa17.83■□□□□ 0.44
LINC00404-201ENST00000418660 LRG1P02750 347 aa17.83■□□□□ 0.44
LINC00404-201ENST00000418660 UNC13DQ70J99 1090 aa17.83■□□□□ 0.44
LINC00404-201ENST00000418660 BRSK2Q8IWQ3 736 aa17.83■□□□□ 0.44
LINC00404-201ENST00000418660 SUGP1Q8IWZ8 645 aaKnown RBP17.83■□□□□ 0.44
LINC00404-201ENST00000418660 EFCAB13Q8IY85 973 aa17.83■□□□□ 0.44
LINC00404-201ENST00000418660 GLIS3Q8NEA6 775 aa17.83■□□□□ 0.44
LINC00404-201ENST00000418660 ZSWIM2Q8NEG5 633 aa17.83■□□□□ 0.44
LINC00404-201ENST00000418660 SENP8Q96LD8 212 aa17.83■□□□□ 0.44
LINC00404-201ENST00000418660 CBWD1Q9BRT8 395 aa17.83■□□□□ 0.44
LINC00404-201ENST00000418660 KCNH6Q9H252 994 aa17.83■□□□□ 0.44
LINC00404-201ENST00000418660 CYP4F11Q9HBI6 524 aa17.83■□□□□ 0.44
LINC00404-201ENST00000418660 DNMT3BQ9UBC3 853 aaKnown RBP17.83■□□□□ 0.44
LINC00404-201ENST00000418660 AFF4Q9UHB7 1163 aaKnown RBP17.83■□□□□ 0.44
LINC00404-201ENST00000418660 KCNH3Q9ULD8 1083 aa17.83■□□□□ 0.44
LINC00404-201ENST00000418660 OR6C75A6NL08 312 aa17.82■□□□□ 0.44
LINC00404-201ENST00000418660 KIAA0391O15091 583 aaKnown RBP17.82■□□□□ 0.44
LINC00404-201ENST00000418660 SPTLC1O15269 473 aa17.82■□□□□ 0.44
LINC00404-201ENST00000418660 SEC24AO95486 1093 aa17.82■□□□□ 0.44
LINC00404-201ENST00000418660 ODC1P11926 461 aa17.82■□□□□ 0.44
LINC00404-201ENST00000418660 CPB1P15086 417 aa17.82■□□□□ 0.44
LINC00404-201ENST00000418660 KRT85P78386 507 aa17.82■□□□□ 0.44
LINC00404-201ENST00000418660 PABPC1LQ4VXU2 614 aaKnown RBP17.82■□□□□ 0.44
LINC00404-201ENST00000418660 FAM26FQ5R3K3 315 aa17.82■□□□□ 0.44
LINC00404-201ENST00000418660 OVOS1Q6IE37 1185 aa17.82■□□□□ 0.44
LINC00404-201ENST00000418660 ARMCX5Q6P1M9 558 aa17.82■□□□□ 0.44
LINC00404-201ENST00000418660 EPM2AIP1Q7L775 607 aaPredicted RBP17.82■□□□□ 0.44
LINC00404-201ENST00000418660 ZNF507Q8TCN5 953 aa17.82■□□□□ 0.44
LINC00404-201ENST00000418660 LEO1Q8WVC0 666 aaPredicted RBP17.82■□□□□ 0.44
LINC00404-201ENST00000418660 PCIF1Q9H4Z3 704 aa17.82■□□□□ 0.44
LINC00404-201ENST00000418660 HCFC1R1Q9NWW0 138 aa17.82■□□□□ 0.44
LINC00404-201ENST00000418660 RBAKQ9NYW8 714 aaPredicted RBP17.82■□□□□ 0.44
LINC00404-201ENST00000418660 CDH7Q9ULB5 785 aa17.82■□□□□ 0.44
LINC00404-201ENST00000418660 DUSP12Q9UNI6 340 aa17.82■□□□□ 0.44
LINC00404-201ENST00000418660 PVALEFA0A1B0GWK0 134 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 GOLGA8IPA6NC78 632 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 GOLGA8JA6NMD2 632 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 ANHXE9PGG2 379 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 CYP11A1P05108 521 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 PTPN2P17706 415 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 HOXD13P35453 343 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 TAF6P49848 677 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 EHHADHQ08426 723 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 ADCY1Q08828 1119 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 RNF19BQ6ZMZ0 732 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 CEP57L1Q8IYX8 460 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 GPD1LQ8N335 351 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 ITFG1Q8TB96 612 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 CACTINQ8WUQ7 758 aaKnown RBP17.81■□□□□ 0.44
LINC00404-201ENST00000418660 RSAD2Q8WXG1 361 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 SPATA32Q96LK8 384 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 BLZF1Q9H2G9 400 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 AVENQ9NQS1 362 aaPredicted RBP17.81■□□□□ 0.44
LINC00404-201ENST00000418660 SERTAD1Q9UHV2 236 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 ATP6V1DQ9Y5K8 247 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 INSL5Q9Y5Q6 135 aa17.81■□□□□ 0.44
LINC00404-201ENST00000418660 ANK1P16157 1881 aa17.8■□□□□ 0.44
LINC00404-201ENST00000418660 SLFN14P0C7P3 912 aa17.8■□□□□ 0.44
LINC00404-201ENST00000418660 CMA1P23946 247 aa17.8■□□□□ 0.44
LINC00404-201ENST00000418660 CASP1P29466 404 aa17.8■□□□□ 0.44
LINC00404-201ENST00000418660 AFMP43652 599 aa17.8■□□□□ 0.44
LINC00404-201ENST00000418660 WNT7BP56706 349 aa17.8■□□□□ 0.44
LINC00404-201ENST00000418660 TFAMQ00059 246 aaKnown RBP17.8■□□□□ 0.44
LINC00404-201ENST00000418660 CUL4BQ13620 913 aa17.8■□□□□ 0.44
LINC00404-201ENST00000418660 HTR4Q13639 388 aa17.8■□□□□ 0.44
LINC00404-201ENST00000418660 MYBPC2Q14324 1141 aa17.8■□□□□ 0.44
LINC00404-201ENST00000418660 SLC44A3Q8N4M1 653 aa17.8■□□□□ 0.44
LINC00404-201ENST00000418660 FGF13Q92913 245 aa17.8■□□□□ 0.44
LINC00404-201ENST00000418660 FAM122AQ96E09 287 aa17.8■□□□□ 0.44
LINC00404-201ENST00000418660 DSEQ9UL01 958 aa17.8■□□□□ 0.44
LINC00404-201ENST00000418660 MYO10Q9HD67 2058 aa17.79■□□□□ 0.44
LINC00404-201ENST00000418660 UBE4BO95155 1302 aa17.79■□□□□ 0.44
LINC00404-201ENST00000418660 TULP1O00294 542 aaPredicted RBP17.79■□□□□ 0.44
LINC00404-201ENST00000418660 CYB561D2O14569 222 aa17.79■□□□□ 0.44
LINC00404-201ENST00000418660 ACTN4O43707 911 aaKnown RBP17.79■□□□□ 0.44
LINC00404-201ENST00000418660 PDGFBP01127 241 aaPredicted RBP17.79■□□□□ 0.44
LINC00404-201ENST00000418660 RHOP08100 348 aa17.79■□□□□ 0.44
LINC00404-201ENST00000418660 OR4Q2P0C623 313 aa17.79■□□□□ 0.44
LINC00404-201ENST00000418660 PLA2G5P39877 138 aa17.79■□□□□ 0.44
LINC00404-201ENST00000418660 GPR17Q13304 367 aa17.79■□□□□ 0.44
LINC00404-201ENST00000418660 SV2CQ496J9 727 aa17.79■□□□□ 0.44
LINC00404-201ENST00000418660 METTL23Q86XA0 190 aa17.79■□□□□ 0.44
LINC00404-201ENST00000418660 NOC3LQ8WTT2 800 aaKnown RBP17.79■□□□□ 0.44
LINC00404-201ENST00000418660 BORCS6Q96GS4 357 aa17.79■□□□□ 0.44
LINC00404-201ENST00000418660 CHAMP1Q96JM3 812 aa17.79■□□□□ 0.44
LINC00404-201ENST00000418660 ZNF560Q96MR9 790 aa17.79■□□□□ 0.44
LINC00404-201ENST00000418660 KIAA1586Q9HCI6 787 aa17.79■□□□□ 0.44
LINC00404-201ENST00000418660 USP25Q9UHP3 1055 aa17.79■□□□□ 0.44
LINC00404-201ENST00000418660 MRPS23Q9Y3D9 190 aaKnown RBP17.79■□□□□ 0.44
LINC00404-201ENST00000418660 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms