RNA–Protein interactions for RNA: ENST00000418454.2

HMGA1P6-201, Transcript of high mobility group AT-hook 1 pseudogene 6, humanhuman

BASIC

Gene HMGA1P6, Length 391 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P6-201ENST00000418454 CDR2LQ86X02 465 aaPredicted RBP10.82□□□□□ -0.68
HMGA1P6-201ENST00000418454 DDX1Q92499 740 aaKnown RBP10.82□□□□□ -0.68
HMGA1P6-201ENST00000418454 PPP1R10Q96QC0 940 aaKnown RBP10.82□□□□□ -0.68
HMGA1P6-201ENST00000418454 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.82□□□□□ -0.68
HMGA1P6-201ENST00000418454 LHX5Q9H2C1 402 aa10.82□□□□□ -0.68
HMGA1P6-201ENST00000418454 TSPYL2Q9H2G4 693 aaPredicted RBP10.82□□□□□ -0.68
HMGA1P6-201ENST00000418454 PRDM10Q9NQV6 1147 aa10.82□□□□□ -0.68
HMGA1P6-201ENST00000418454 TRMT1Q9NXH9 659 aaKnown RBP10.82□□□□□ -0.68
HMGA1P6-201ENST00000418454 PARP2Q9UGN5 583 aa10.82□□□□□ -0.68
HMGA1P6-201ENST00000418454 NOCTQ9UK39 431 aaKnown RBP10.82□□□□□ -0.68
HMGA1P6-201ENST00000418454 AJAP1Q9UKB5 411 aaPredicted RBP10.82□□□□□ -0.68
HMGA1P6-201ENST00000418454 PCDHGC3Q9UN70 934 aa10.82□□□□□ -0.68
HMGA1P6-201ENST00000418454 C9IYK1 514 aa10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 DDX3XO00571 662 aaKnown RBP eCLIP10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 CYP26A1O43174 497 aa10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 HOXA2O43364 376 aa10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 PLEKP08567 350 aaPredicted RBP10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 CD52P31358 61 aa10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 ASPAP45381 313 aa10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 MNX1P50219 401 aaPredicted RBP10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 TNNC1P63316 161 aa10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 ARID5AQ03989 594 aa10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 GFPT1Q06210 699 aaPredicted RBP10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 WDR72Q3MJ13 1102 aa10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 PLEKHG4Q58EX7 1191 aa10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 C9orf57Q5W0N0 161 aa10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 ECHDC2Q86YB7 292 aa10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 RHOT2Q8IXI1 618 aa10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 TOP6BLQ8N6T0 577 aa10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 SEPT8Q92599 483 aa10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 ZMAT2Q96NC0 199 aaKnown RBP10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 NXF3Q9H4D5 531 aaKnown RBP10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 RRAGDQ9NQL2 400 aaPredicted RBP10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 CISHQ9NSE2 258 aa10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 TSKSQ9UJT2 592 aa10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 BARX2Q9UMQ3 279 aaPredicted RBP10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 AGAP1Q9UPQ3 857 aa10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 PCDHB4Q9Y5E5 795 aa10.81□□□□□ -0.68
HMGA1P6-201ENST00000418454 FRMPD3Q5JV73 1810 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 USP27XA6NNY8 438 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 EFCAB14O75071 495 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 CILPO75339 1184 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 MTA2O94776 668 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 KIF4AO95239 1232 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 CYP1A1P04798 512 aaPredicted RBP10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 PFKMP08237 780 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 KRT19P08727 400 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 CTSHP09668 335 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 GHRP10912 638 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 VDRP11473 427 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 POLR2BP30876 1174 aaKnown RBP10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 CDH5P33151 784 aaPredicted RBP10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 TAF6P49848 677 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 SNX16P57768 344 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 GPC5P78333 572 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 GRIK3Q13003 919 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 DNTTIP2Q5QJE6 756 aaKnown RBP10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 LMBRD2Q68DH5 695 aaPredicted RBP10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 ACAD10Q6JQN1 1059 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 CRYBG2Q8N1P7 616 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 TMEM86AQ8N2M4 240 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 ACRBPQ8NEB7 543 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 GSTCDQ8NEC7 633 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 SECISBP2LQ93073 1101 aaKnown RBP10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 TMEM176AQ96HP8 235 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 NOX5Q96PH1 765 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 ALS2CR12Q96Q35 445 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 RPS6KC1Q96S38 1066 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 ADAM2Q99965 735 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 DESI2Q9BSY9 194 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 PI4K2AQ9BTU6 479 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 TMEM106CQ9BVX2 250 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 MIS12Q9H081 205 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 RSAD1Q9HA92 442 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 TMEM161AQ9NX61 479 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 JRKLQ9Y4A0 524 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 UMODL1Q5DID0 1318 aa10.8□□□□□ -0.68
HMGA1P6-201ENST00000418454 ARL5CA6NH57 179 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 KPNA7A9QM74 516 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 TMEM189-UBE2V1I3L0A0 370 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 PTGESO14684 152 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 LRRN2O75325 713 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 UNGP13051 313 aaPredicted RBP10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 KRT5P13647 590 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 CHRNB2P17787 502 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 AKAP5P24588 427 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 GNA15P30679 374 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 CASQ1P31415 396 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 USP8P40818 1118 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 GNG11P61952 73 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 FMO1Q01740 532 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 FAAP100Q0VG06 881 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 CNGA2Q16280 664 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 TMEM270Q6UE05 265 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 AGMOQ6ZNB7 445 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 NECAB2Q7Z6G3 386 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 NOP9Q86U38 636 aaKnown RBP10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 SLC47A2Q86VL8 602 aa10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 PHF13Q86YI8 300 aaPredicted RBP10.79□□□□□ -0.68
HMGA1P6-201ENST00000418454 GLYCTKQ8IVS8 523 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms