RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 TRIP11Q15643 1979 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 HIP1RO75146 1068 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 CHRNB1P11230 501 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 HOXC13P31276 330 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 CXCL12P48061 93 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 KRT85P78386 507 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 NUCB2P80303 420 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 FAM78AQ5JUQ0 283 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 PRSS36Q5K4E3 855 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 IL31Q6EBC2 164 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 SLC27A1Q6PCB7 646 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 DAW1Q8N136 415 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 FAM160A2Q8N612 972 aaPredicted RBP19.65■□□□□ 0.74
VCP-202ENST00000417448 SYT2Q8N9I0 419 aaPredicted RBP19.65■□□□□ 0.74
VCP-202ENST00000417448 RAD54LQ92698 747 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 TCEAL4Q96EI5 215 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 SPATA32Q96LK8 384 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 KIFC3Q9BVG8 833 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 ZNF334Q9HCZ1 680 aaPredicted RBP19.65■□□□□ 0.74
VCP-202ENST00000417448 AVENQ9NQS1 362 aaPredicted RBP19.65■□□□□ 0.74
VCP-202ENST00000417448 MTRRQ9UBK8 725 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 USP20Q9Y2K6 914 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 CDY1Q9Y6F8 540 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 PIAS3Q9Y6X2 628 aa19.65■□□□□ 0.74
VCP-202ENST00000417448 A0A1B0GUA9 196 aa19.64■□□□□ 0.73
VCP-202ENST00000417448 LRRIQ4A6NIV6 560 aa19.64■□□□□ 0.73
VCP-202ENST00000417448 K7ESF4 209 aa19.64■□□□□ 0.73
VCP-202ENST00000417448 PROS1P07225 676 aa19.64■□□□□ 0.73
VCP-202ENST00000417448 LIG1P18858 919 aa19.64■□□□□ 0.73
VCP-202ENST00000417448 LIMK1P53667 647 aa19.64■□□□□ 0.73
VCP-202ENST00000417448 NCBP1Q09161 790 aaKnown RBP19.64■□□□□ 0.73
VCP-202ENST00000417448 SF3A2Q15428 464 aaKnown RBP19.64■□□□□ 0.73
VCP-202ENST00000417448 WDR44Q5JSH3 913 aa19.64■□□□□ 0.73
VCP-202ENST00000417448 RRAGBQ5VZM2 374 aa19.64■□□□□ 0.73
VCP-202ENST00000417448 ATL3Q6DD88 541 aa19.64■□□□□ 0.73
VCP-202ENST00000417448 GPBP1Q86WP2 473 aa19.64■□□□□ 0.73
VCP-202ENST00000417448 MAP4K3Q8IVH8 894 aa19.64■□□□□ 0.73
VCP-202ENST00000417448 MCPH1Q8NEM0 835 aa19.64■□□□□ 0.73
VCP-202ENST00000417448 C2orf42Q9NWW7 574 aa19.64■□□□□ 0.73
VCP-202ENST00000417448 MORC2Q9Y6X9 1032 aaPredicted RBP19.64■□□□□ 0.73
VCP-202ENST00000417448 NCANO14594 1321 aa19.64■□□□□ 0.73
VCP-202ENST00000417448 CCR2P41597 374 aa19.63■□□□□ 0.73
VCP-202ENST00000417448 POU5F1BQ06416 359 aa19.63■□□□□ 0.73
VCP-202ENST00000417448 MAPK7Q13164 816 aa19.63■□□□□ 0.73
VCP-202ENST00000417448 MXD4Q14582 209 aaPredicted RBP19.63■□□□□ 0.73
VCP-202ENST00000417448 VITQ6UXI7 678 aa19.63■□□□□ 0.73
VCP-202ENST00000417448 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.63■□□□□ 0.73
VCP-202ENST00000417448 TRMT61BQ9BVS5 477 aaKnown RBP19.63■□□□□ 0.73
VCP-202ENST00000417448 CCDC39Q9UFE4 941 aa19.63■□□□□ 0.73
VCP-202ENST00000417448 AKAP13Q12802 2813 aa19.63■□□□□ 0.73
VCP-202ENST00000417448 PKD1L2Q7Z442 2459 aa19.63■□□□□ 0.73
VCP-202ENST00000417448 FGFR3P22607 806 aa19.62■□□□□ 0.73
VCP-202ENST00000417448 GDI1P31150 447 aa19.62■□□□□ 0.73
VCP-202ENST00000417448 TXLNAP40222 546 aa19.62■□□□□ 0.73
VCP-202ENST00000417448 CCDC6Q16204 474 aa19.62■□□□□ 0.73
VCP-202ENST00000417448 AASDHQ4L235 1098 aaPredicted RBP19.62■□□□□ 0.73
VCP-202ENST00000417448 HEATR6Q6AI08 1181 aaKnown RBP19.62■□□□□ 0.73
VCP-202ENST00000417448 PDXDC1Q6P996 788 aa19.62■□□□□ 0.73
VCP-202ENST00000417448 RTL10Q7L3V2 364 aa19.62■□□□□ 0.73
VCP-202ENST00000417448 LONP2Q86WA8 852 aa19.62■□□□□ 0.73
VCP-202ENST00000417448 IRF7Q92985 503 aa19.62■□□□□ 0.73
VCP-202ENST00000417448 ZSWIM3Q96MP5 696 aa19.62■□□□□ 0.73
VCP-202ENST00000417448 ASB16Q96NS5 453 aa19.62■□□□□ 0.73
VCP-202ENST00000417448 ZFP14Q9HCL3 533 aa19.62■□□□□ 0.73
VCP-202ENST00000417448 TRPV5Q9NQA5 729 aa19.62■□□□□ 0.73
VCP-202ENST00000417448 RBM12Q9NTZ6 932 aaKnown RBP19.62■□□□□ 0.73
VCP-202ENST00000417448 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.61■□□□□ 0.73
VCP-202ENST00000417448 C1QTNF9BB2RNN3 333 aa19.61■□□□□ 0.73
VCP-202ENST00000417448 ARNTLO00327 626 aa19.61■□□□□ 0.73
VCP-202ENST00000417448 FOXD2O60548 495 aaPredicted RBP19.61■□□□□ 0.73
VCP-202ENST00000417448 C1QTNF9P0C862 333 aa19.61■□□□□ 0.73
VCP-202ENST00000417448 CCNE1P24864 410 aa19.61■□□□□ 0.73
VCP-202ENST00000417448 CNR2P34972 360 aa19.61■□□□□ 0.73
VCP-202ENST00000417448 STAT6P42226 847 aa19.61■□□□□ 0.73
VCP-202ENST00000417448 PEX3P56589 373 aa19.61■□□□□ 0.73
VCP-202ENST00000417448 ELAVL2Q12926 359 aaKnown RBP19.61■□□□□ 0.73
VCP-202ENST00000417448 TFDP1Q14186 410 aa19.61■□□□□ 0.73
VCP-202ENST00000417448 Q6ZS52 159 aa19.61■□□□□ 0.73
VCP-202ENST00000417448 SPEM1Q8N4L4 309 aa19.61■□□□□ 0.73
VCP-202ENST00000417448 LARP4BQ92615 738 aaKnown RBP19.61■□□□□ 0.73
VCP-202ENST00000417448 DHX58Q96C10 678 aa19.61■□□□□ 0.73
VCP-202ENST00000417448 NFKBIZQ9BYH8 718 aa19.61■□□□□ 0.73
VCP-202ENST00000417448 ZMIZ1Q9ULJ6 1067 aa19.61■□□□□ 0.73
VCP-202ENST00000417448 ATP6V1DQ9Y5K8 247 aa19.61■□□□□ 0.73
VCP-202ENST00000417448 EML5Q05BV3 1969 aa19.61■□□□□ 0.73
VCP-202ENST00000417448 A0A1B0GVL5 298 aa19.6■□□□□ 0.73
VCP-202ENST00000417448 ARHGEF37A1IGU5 675 aa19.6■□□□□ 0.73
VCP-202ENST00000417448 WDR27A2RRH5 827 aa19.6■□□□□ 0.73
VCP-202ENST00000417448 TTLL13PA6NNM8 815 aa19.6■□□□□ 0.73
VCP-202ENST00000417448 CCDC169A6NNP5 214 aa19.6■□□□□ 0.73
VCP-202ENST00000417448 SLC26A4O43511 780 aa19.6■□□□□ 0.73
VCP-202ENST00000417448 PAPSS2O95340 614 aaPredicted RBP19.6■□□□□ 0.73
VCP-202ENST00000417448 THP07101 528 aa19.6■□□□□ 0.73
VCP-202ENST00000417448 PTPN2P17706 415 aa19.6■□□□□ 0.73
VCP-202ENST00000417448 PSMC3P17980 439 aa19.6■□□□□ 0.73
VCP-202ENST00000417448 TKTP29401 623 aaKnown RBP19.6■□□□□ 0.73
VCP-202ENST00000417448 ACAP1Q15027 740 aa19.6■□□□□ 0.73
VCP-202ENST00000417448 RESP18Q5W5W9 173 aa19.6■□□□□ 0.73
VCP-202ENST00000417448 CD300LGQ6UXG3 332 aa19.6■□□□□ 0.73
VCP-202ENST00000417448 DYMQ7RTS9 669 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms