RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 ANKRD63C9JTQ0 380 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 SIAH2O43255 324 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 RASA4O43374 803 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 ADAM23O75077 832 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 SPAG7O75391 227 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 CIB2O75838 187 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 USP1O94782 785 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 TTC4O95801 387 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 RARBP10826 455 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 ESRRAP11474 423 aaPredicted RBP6.75□□□□□ -1.33
CCNT1-202ENST00000417344 CETPP11597 493 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 ALAS1P13196 640 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 HSPA6P17066 643 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 ANXA13P27216 316 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 ACTR3P61158 418 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 XIAPP98170 497 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 AMPD3Q01432 767 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 CYP4A11Q02928 519 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 DLG1Q12959 904 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 CALCOCO2Q13137 446 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 ZNF211Q13398 564 aaPredicted RBP6.75□□□□□ -1.33
CCNT1-202ENST00000417344 KRT72Q14CN4 511 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 MYLK3Q32MK0 819 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 SFT2D3Q587I9 215 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 DEPDC1Q5TB30 811 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 TMCO4Q5TGY1 634 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 TTC27Q6P3X3 843 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 CCDC62Q6P9F0 684 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 CCDC137Q6PK04 289 aaKnown RBP6.75□□□□□ -1.33
CCNT1-202ENST00000417344 RIPOR1Q6ZS17 1223 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 ARPINQ7Z6K5 226 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 ADGRG6Q86SQ4 1221 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 ANKLE2Q86XL3 938 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 IFNL3Q8IZI9 196 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 TRIM11Q96F44 468 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 ZNF594Q96JF6 807 aaPredicted RBP6.75□□□□□ -1.33
CCNT1-202ENST00000417344 COX4I2Q96KJ9 171 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 STRBPQ96SI9 672 aaKnown RBP6.75□□□□□ -1.33
CCNT1-202ENST00000417344 TSG101Q99816 390 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 OSBPL10Q9BXB5 764 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 SENP6Q9GZR1 1112 aaPredicted RBP6.75□□□□□ -1.33
CCNT1-202ENST00000417344 GANQ9H2C0 597 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 PLGRKTQ9HBL7 147 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 GPAMQ9HCL2 828 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 THEGQ9P2T0 379 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 PPM1HQ9ULR3 514 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 SSX2IPQ9Y2D8 614 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 COL4A3BPQ9Y5P4 624 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 GPC6Q9Y625 555 aaPredicted RBP6.75□□□□□ -1.33
CCNT1-202ENST00000417344 RTL9Q8NET4 1388 aa6.75□□□□□ -1.33
CCNT1-202ENST00000417344 FUOMA2VDF0 154 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 TECPR2O15040 1411 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 LZTS3O60299 673 aaPredicted RBP6.74□□□□□ -1.33
CCNT1-202ENST00000417344 DNAJC6O75061 913 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 FKBP6O75344 327 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 IDH1O75874 414 aaKnown RBP6.74□□□□□ -1.33
CCNT1-202ENST00000417344 PLEKHA8P1O95397 391 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 TATP17735 454 aaPredicted RBP6.74□□□□□ -1.33
CCNT1-202ENST00000417344 CTNNA2P26232 953 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 STIP1P31948 543 aaKnown RBP6.74□□□□□ -1.33
CCNT1-202ENST00000417344 AQP4P55087 323 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 PRR20EP86478 221 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 PRR20CP86479 221 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 PRR20DP86480 221 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 PRR20BP86481 221 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 PRR20AP86496 221 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 MSLNQ13421 630 aaPredicted RBP6.74□□□□□ -1.33
CCNT1-202ENST00000417344 ZNF423Q2M1K9 1284 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 PLEKHG4Q58EX7 1191 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 TMEM63BQ5T3F8 832 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 BORAQ6PGQ7 559 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 GUF1Q8N442 669 aaKnown RBP6.74□□□□□ -1.33
CCNT1-202ENST00000417344 PRELID2Q8N945 189 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.74□□□□□ -1.33
CCNT1-202ENST00000417344 CCDC110Q8TBZ0 833 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 DENND1AQ8TEH3 1009 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 SH3RF3Q8TEJ3 882 aaPredicted RBP6.74□□□□□ -1.33
CCNT1-202ENST00000417344 FAM172AQ8WUF8 416 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 MRGPRX2Q96LB1 330 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 PANX3Q96QZ0 392 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 HEPHQ9BQS7 1158 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 MRPS26Q9BYN8 205 aaKnown RBP6.74□□□□□ -1.33
CCNT1-202ENST00000417344 OSBPL8Q9BZF1 889 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 GRIP2Q9C0E4 1043 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 KLHL4Q9C0H6 718 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 ZNF532Q9HCE3 1301 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 EPB41L4AQ9HCS5 686 aaPredicted RBP6.74□□□□□ -1.33
CCNT1-202ENST00000417344 OSGEPQ9NPF4 335 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 AAASQ9NRG9 546 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 DNAJC17Q9NVM6 304 aaKnown RBP6.74□□□□□ -1.33
CCNT1-202ENST00000417344 PLK2Q9NYY3 685 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 ANKFY1Q9P2R3 1169 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 HEY2Q9UBP5 337 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 GRID1Q9ULK0 1009 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 NENFQ9UMX5 172 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.74□□□□□ -1.33
CCNT1-202ENST00000417344 TIMM22Q9Y584 194 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 C1orf167Q5SNV9 1468 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 ZMYM2Q9UBW7 1377 aa6.74□□□□□ -1.33
CCNT1-202ENST00000417344 FLT1P17948 1338 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms