RNA–Protein interactions for RNA: ENST00000417030.2

CKLF-205, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 4 BASIC

Gene CKLF, Length 628 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-205ENST00000417030 NR2F2P24468 414 aa23.64■■□□□ 1.37
CKLF-205ENST00000417030 RPL13P26373 211 aaKnown RBP23.64■■□□□ 1.37
CKLF-205ENST00000417030 TFAMQ00059 246 aaKnown RBP23.64■■□□□ 1.37
CKLF-205ENST00000417030 RTP2Q5QGT7 225 aa23.64■■□□□ 1.37
CKLF-205ENST00000417030 RARS2Q5T160 578 aaKnown RBP23.64■■□□□ 1.37
CKLF-205ENST00000417030 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.64■■□□□ 1.37
CKLF-205ENST00000417030 C12orf76Q8N812 135 aaPredicted RBP23.64■■□□□ 1.37
CKLF-205ENST00000417030 HDAC7Q8WUI4 952 aa23.64■■□□□ 1.37
CKLF-205ENST00000417030 PIK3R5Q8WYR1 880 aa23.64■■□□□ 1.37
CKLF-205ENST00000417030 SFXN1Q9H9B4 322 aa23.64■■□□□ 1.37
CKLF-205ENST00000417030 NUB1Q9Y5A7 615 aa23.64■■□□□ 1.37
CKLF-205ENST00000417030 LOC730098B7Z3J9 87 aa23.63■■□□□ 1.37
CKLF-205ENST00000417030 PI4K2BG5E9Z4 385 aa23.63■■□□□ 1.37
CKLF-205ENST00000417030 TULP1O00294 542 aaPredicted RBP23.63■■□□□ 1.37
CKLF-205ENST00000417030 PSMA7O14818 248 aa23.63■■□□□ 1.37
CKLF-205ENST00000417030 MBD3O95983 291 aa23.63■■□□□ 1.37
CKLF-205ENST00000417030 ALADP13716 330 aa23.63■■□□□ 1.37
CKLF-205ENST00000417030 CD44P16070 742 aaKnown RBP23.63■■□□□ 1.37
CKLF-205ENST00000417030 FGFR3P22607 806 aa23.63■■□□□ 1.37
CKLF-205ENST00000417030 BRCC3P46736 316 aa23.63■■□□□ 1.37
CKLF-205ENST00000417030 CASP4P49662 377 aa23.63■■□□□ 1.37
CKLF-205ENST00000417030 C9orf57Q5W0N0 161 aa23.63■■□□□ 1.37
CKLF-205ENST00000417030 WDR49Q8IV35 697 aa23.63■■□□□ 1.37
CKLF-205ENST00000417030 LNX1Q8TBB1 728 aaPredicted RBP23.63■■□□□ 1.37
CKLF-205ENST00000417030 DHTKD1Q96HY7 919 aaPredicted RBP23.63■■□□□ 1.37
CKLF-205ENST00000417030 C1QTNF1Q9BXJ1 281 aa23.63■■□□□ 1.37
CKLF-205ENST00000417030 PLEKHA4Q9H4M7 779 aa23.63■■□□□ 1.37
CKLF-205ENST00000417030 INTS13Q9NVM9 706 aa23.63■■□□□ 1.37
CKLF-205ENST00000417030 FRMD4BQ9Y2L6 1034 aa23.63■■□□□ 1.37
CKLF-205ENST00000417030 PIRO00625 290 aa23.62■■□□□ 1.37
CKLF-205ENST00000417030 PPEF2O14830 753 aa23.62■■□□□ 1.37
CKLF-205ENST00000417030 MAPK13O15264 365 aa23.62■■□□□ 1.37
CKLF-205ENST00000417030 TMEM191BP0C7N4 346 aa23.62■■□□□ 1.37
CKLF-205ENST00000417030 MCM4P33991 863 aa23.62■■□□□ 1.37
CKLF-205ENST00000417030 ADAM9Q13443 819 aa23.62■■□□□ 1.37
CKLF-205ENST00000417030 CEP135Q66GS9 1140 aa23.62■■□□□ 1.37
CKLF-205ENST00000417030 PRSS55Q6UWB4 352 aaPredicted RBP23.62■■□□□ 1.37
CKLF-205ENST00000417030 PALB2Q86YC2 1186 aa23.62■■□□□ 1.37
CKLF-205ENST00000417030 ANKRD36BP1Q96IX9 119 aa23.62■■□□□ 1.37
CKLF-205ENST00000417030 RPGRIP1Q96KN7 1286 aa23.62■■□□□ 1.37
CKLF-205ENST00000417030 SUSD3Q96L08 255 aa23.62■■□□□ 1.37
CKLF-205ENST00000417030 FNBP1Q96RU3 617 aa23.62■■□□□ 1.37
CKLF-205ENST00000417030 CGRRF1Q99675 332 aa23.62■■□□□ 1.37
CKLF-205ENST00000417030 TSG101Q99816 390 aa23.62■■□□□ 1.37
CKLF-205ENST00000417030 MAN1C1Q9NR34 630 aa23.62■■□□□ 1.37
CKLF-205ENST00000417030 PTPRJQ12913 1337 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 PPP1R3GB7ZBB8 358 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 I3L4J1 428 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 PAX3P23760 479 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 CCNE1P24864 410 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 AARSP49588 968 aaKnown RBP eCLIP23.61■■□□□ 1.37
CKLF-205ENST00000417030 PMS1P54277 932 aaKnown RBP23.61■■□□□ 1.37
CKLF-205ENST00000417030 LRRC63Q05C16 580 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 PSMD5Q16401 504 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 DUOXA2Q1HG44 320 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 LMBRD2Q68DH5 695 aaPredicted RBP23.61■■□□□ 1.37
CKLF-205ENST00000417030 ANKRD40Q6AI12 368 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 LILRA6Q6PI73 481 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 TMC5Q6UXY8 1006 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 CYP26C1Q6V0L0 522 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 C15orf39Q6ZRI6 1047 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 C1orf127Q8N9H9 656 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 KHSRPQ92945 711 aaKnown RBP eCLIP23.61■■□□□ 1.37
CKLF-205ENST00000417030 CCDC127Q96BQ5 260 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 CLSTN3Q9BQT9 956 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 MTMR12Q9C0I1 747 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 GZF1Q9H116 711 aaPredicted RBP23.61■■□□□ 1.37
CKLF-205ENST00000417030 EPHX3Q9H6B9 360 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 ITGA11Q9UKX5 1188 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 C5orf42Q9H799 3197 aa23.61■■□□□ 1.37
CKLF-205ENST00000417030 TGM5O43548 720 aa23.6■■□□□ 1.37
CKLF-205ENST00000417030 AKAP3O75969 853 aa23.6■■□□□ 1.37
CKLF-205ENST00000417030 DLATP10515 647 aaKnown RBP23.6■■□□□ 1.37
CKLF-205ENST00000417030 RPL17P18621 184 aaKnown RBP23.6■■□□□ 1.37
CKLF-205ENST00000417030 TNNI1P19237 187 aa23.6■■□□□ 1.37
CKLF-205ENST00000417030 ANKS3Q6ZW76 656 aa23.6■■□□□ 1.37
CKLF-205ENST00000417030 GPR149Q86SP6 731 aa23.6■■□□□ 1.37
CKLF-205ENST00000417030 GLYCTKQ8IVS8 523 aa23.6■■□□□ 1.37
CKLF-205ENST00000417030 CMASQ8NFW8 434 aaPredicted RBP23.6■■□□□ 1.37
CKLF-205ENST00000417030 OR5B17Q8NGF7 314 aa23.6■■□□□ 1.37
CKLF-205ENST00000417030 CXorf38Q8TB03 319 aa23.6■■□□□ 1.37
CKLF-205ENST00000417030 PLEKHO2Q8TD55 490 aa23.6■■□□□ 1.37
CKLF-205ENST00000417030 PARD3BQ8TEW8 1205 aa23.6■■□□□ 1.37
CKLF-205ENST00000417030 FAM84AQ96KN4 292 aa23.6■■□□□ 1.37
CKLF-205ENST00000417030 NR2E1Q9Y466 385 aa23.6■■□□□ 1.37
CKLF-205ENST00000417030 M0QZQ0 153 aa23.59■■□□□ 1.37
CKLF-205ENST00000417030 SYN3O14994 580 aa23.59■■□□□ 1.37
CKLF-205ENST00000417030 TNNC2P02585 160 aa23.59■■□□□ 1.37
CKLF-205ENST00000417030 ITGB3P05106 788 aa23.59■■□□□ 1.37
CKLF-205ENST00000417030 SPATA31D3P0C874 917 aa23.59■■□□□ 1.37
CKLF-205ENST00000417030 TKTP29401 623 aaKnown RBP23.59■■□□□ 1.37
CKLF-205ENST00000417030 LILRA4P59901 499 aa23.59■■□□□ 1.37
CKLF-205ENST00000417030 FKBP3Q00688 224 aaKnown RBP23.59■■□□□ 1.37
CKLF-205ENST00000417030 KLHL10Q6JEL2 608 aa23.59■■□□□ 1.37
CKLF-205ENST00000417030 FOXR2Q6PJQ5 311 aa23.59■■□□□ 1.37
CKLF-205ENST00000417030 SPATA31D4Q6ZUB0 917 aa23.59■■□□□ 1.37
CKLF-205ENST00000417030 RNF135Q8IUD6 432 aa23.59■■□□□ 1.37
CKLF-205ENST00000417030 ZC3H3Q8IXZ2 948 aaKnown RBP23.59■■□□□ 1.37
CKLF-205ENST00000417030 TMC2Q8TDI7 906 aa23.59■■□□□ 1.37
CKLF-205ENST00000417030 POMKQ9H5K3 350 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms