RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 TRMT61BQ9BVS5 477 aaKnown RBP15.7■□□□□ 0.1
PAF1-202ENST00000416728 BRD9Q9H8M2 597 aa15.7■□□□□ 0.1
PAF1-202ENST00000416728 RPF1Q9H9Y2 349 aaKnown RBP15.7■□□□□ 0.1
PAF1-202ENST00000416728 UPF2Q9HAU5 1272 aaKnown RBP15.7■□□□□ 0.1
PAF1-202ENST00000416728 PARVGQ9HBI0 331 aa15.7■□□□□ 0.1
PAF1-202ENST00000416728 TBX20Q9UMR3 447 aa15.7■□□□□ 0.1
PAF1-202ENST00000416728 TRIP11Q15643 1979 aa15.7■□□□□ 0.1
PAF1-202ENST00000416728 NOTCH4Q99466 2003 aa15.69■□□□□ 0.1
PAF1-202ENST00000416728 COL4A3Q01955 1670 aa15.69■□□□□ 0.1
PAF1-202ENST00000416728 LACTBL1A8MY62 500 aa15.69■□□□□ 0.1
PAF1-202ENST00000416728 OGTO15294 1046 aa15.69■□□□□ 0.1
PAF1-202ENST00000416728 BMP15O95972 392 aa15.69■□□□□ 0.1
PAF1-202ENST00000416728 PIGRP01833 764 aa15.69■□□□□ 0.1
PAF1-202ENST00000416728 KRT18P05783 430 aaKnown RBP15.69■□□□□ 0.1
PAF1-202ENST00000416728 AARSP49588 968 aaKnown RBP eCLIP15.69■□□□□ 0.1
PAF1-202ENST00000416728 ENOX2Q16206 610 aaKnown RBP15.69■□□□□ 0.1
PAF1-202ENST00000416728 DSTYKQ6XUX3 929 aa15.69■□□□□ 0.1
PAF1-202ENST00000416728 BEST2Q8NFU1 509 aa15.69■□□□□ 0.1
PAF1-202ENST00000416728 RUBCNQ92622 972 aa15.69■□□□□ 0.1
PAF1-202ENST00000416728 SMARCD2Q92925 531 aa15.69■□□□□ 0.1
PAF1-202ENST00000416728 CLDN23Q96B33 292 aa15.69■□□□□ 0.1
PAF1-202ENST00000416728 PGLYRP2Q96PD5 576 aa15.69■□□□□ 0.1
PAF1-202ENST00000416728 TSPAN18Q96SJ8 248 aa15.69■□□□□ 0.1
PAF1-202ENST00000416728 ZHX3Q9H4I2 956 aa15.69■□□□□ 0.1
PAF1-202ENST00000416728 YIPF1Q9Y548 306 aa15.69■□□□□ 0.1
PAF1-202ENST00000416728 OR6C75A6NL08 312 aa15.68■□□□□ 0.1
PAF1-202ENST00000416728 TRAK2O60296 914 aa15.68■□□□□ 0.1
PAF1-202ENST00000416728 FAM189A1O60320 539 aa15.68■□□□□ 0.1
PAF1-202ENST00000416728 TBCAO75347 108 aaKnown RBP15.68■□□□□ 0.1
PAF1-202ENST00000416728 OR4Q2P0C623 313 aa15.68■□□□□ 0.1
PAF1-202ENST00000416728 PSMC3P17980 439 aa15.68■□□□□ 0.1
PAF1-202ENST00000416728 RPS9P46781 194 aaKnown RBP15.68■□□□□ 0.1
PAF1-202ENST00000416728 GUCY2FP51841 1108 aa15.68■□□□□ 0.1
PAF1-202ENST00000416728 ZNF131P52739 623 aa15.68■□□□□ 0.1
PAF1-202ENST00000416728 EPHA5P54756 1037 aa15.68■□□□□ 0.1
PAF1-202ENST00000416728 CSTF1Q05048 431 aaKnown RBP15.68■□□□□ 0.1
PAF1-202ENST00000416728 PLD1Q13393 1074 aa15.68■□□□□ 0.1
PAF1-202ENST00000416728 LARP1BQ659C4 914 aaKnown RBP15.68■□□□□ 0.1
PAF1-202ENST00000416728 ERMP1Q7Z2K6 904 aa15.68■□□□□ 0.1
PAF1-202ENST00000416728 IRF7Q92985 503 aa15.68■□□□□ 0.1
PAF1-202ENST00000416728 FAM212AQ96EL1 285 aa15.68■□□□□ 0.1
PAF1-202ENST00000416728 ZSWIM3Q96MP5 696 aa15.68■□□□□ 0.1
PAF1-202ENST00000416728 MSTO1Q9BUK6 570 aa15.68■□□□□ 0.1
PAF1-202ENST00000416728 SLITRK6Q9H5Y7 841 aa15.68■□□□□ 0.1
PAF1-202ENST00000416728 BLOC1S4Q9NUP1 217 aa15.68■□□□□ 0.1
PAF1-202ENST00000416728 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.68■□□□□ 0.1
PAF1-202ENST00000416728 CITO14578 2027 aa15.68■□□□□ 0.1
PAF1-202ENST00000416728 A0A0B4J269 797 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 MAN2B1O00754 1011 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 NRG2O14511 850 aaPredicted RBP15.67■□□□□ 0.1
PAF1-202ENST00000416728 SPTLC1O15269 473 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 MOSPD3O75425 235 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 GJA1P17302 382 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 PLCG1P19174 1290 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 TYMPP19971 482 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 GDI1P31150 447 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 ABCD1P33897 745 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 LONP1P36776 959 aaKnown RBP15.67■□□□□ 0.1
PAF1-202ENST00000416728 GPR17Q13304 367 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 MCM6Q14566 821 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 KARSQ15046 597 aaKnown RBP15.67■□□□□ 0.1
PAF1-202ENST00000416728 SPATA1Q5VX52 437 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 OVOS1Q6IE37 1185 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 VITQ6UXI7 678 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 BRAPQ7Z569 592 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 CD302Q8IX05 232 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 KIAA2013Q8IYS2 634 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 ZSCAN18Q8TBC5 510 aaPredicted RBP15.67■□□□□ 0.1
PAF1-202ENST00000416728 LRRC15Q8TF66 581 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 DEPDC1BQ8WUY9 529 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 ATRIPQ8WXE1 791 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 RAD54LQ92698 747 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 BORCS6Q96GS4 357 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 GPR88Q9GZN0 384 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 NDRG2Q9UN36 371 aaKnown RBP15.67■□□□□ 0.1
PAF1-202ENST00000416728 PCDHGA2Q9Y5H1 932 aa15.67■□□□□ 0.1
PAF1-202ENST00000416728 EP300Q09472 2414 aaPredicted RBP15.66■□□□□ 0.1
PAF1-202ENST00000416728 VNN2O95498 520 aa15.66■□□□□ 0.1
PAF1-202ENST00000416728 CENPBP07199 599 aaPredicted RBP15.66■□□□□ 0.1
PAF1-202ENST00000416728 ADRB2P07550 413 aa15.66■□□□□ 0.1
PAF1-202ENST00000416728 ODC1P11926 461 aa15.66■□□□□ 0.1
PAF1-202ENST00000416728 VIPR2P41587 438 aa15.66■□□□□ 0.1
PAF1-202ENST00000416728 ALDH1A3P47895 512 aa15.66■□□□□ 0.1
PAF1-202ENST00000416728 EPHB3P54753 998 aa15.66■□□□□ 0.1
PAF1-202ENST00000416728 LILRA4P59901 499 aa15.66■□□□□ 0.1
PAF1-202ENST00000416728 GRIN1Q05586 938 aa15.66■□□□□ 0.1
PAF1-202ENST00000416728 DUSP4Q13115 394 aa15.66■□□□□ 0.1
PAF1-202ENST00000416728 TEAD2Q15562 447 aa15.66■□□□□ 0.1
PAF1-202ENST00000416728 JADE1Q6IE81 842 aa15.66■□□□□ 0.1
PAF1-202ENST00000416728 MAP4K3Q8IVH8 894 aa15.66■□□□□ 0.1
PAF1-202ENST00000416728 SUMF1Q8NBK3 374 aa15.66■□□□□ 0.1
PAF1-202ENST00000416728 SHKBP1Q8TBC3 707 aa15.66■□□□□ 0.1
PAF1-202ENST00000416728 TRPV4Q9HBA0 871 aa15.66■□□□□ 0.1
PAF1-202ENST00000416728 ZNF334Q9HCZ1 680 aaPredicted RBP15.66■□□□□ 0.1
PAF1-202ENST00000416728 TRPV5Q9NQA5 729 aa15.66■□□□□ 0.1
PAF1-202ENST00000416728 CPSF3Q9UKF6 684 aaKnown RBP15.66■□□□□ 0.1
PAF1-202ENST00000416728 SHISA7A6NL88 538 aa15.65■□□□□ 0.1
PAF1-202ENST00000416728 PPEF2O14830 753 aa15.65■□□□□ 0.1
PAF1-202ENST00000416728 ZNF263O14978 683 aa15.65■□□□□ 0.1
PAF1-202ENST00000416728 PAX3P23760 479 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms